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  5. Cz07g31250.t1

Cz07g31250.t1


Description : Tetratricopeptide repeat [Interproscan].


Gene families : OG_01_0004465 (OrthoFinder) Phylogenetic Tree(s): OG0004465_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz07g31250.t1
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001038.4 tig00001038_g6514.t1 No description available 0.02 OrthoFinder
Cre07.g335750 30775387, IFT88 No description available 0.06 OrthoFinder
Vocar.0011s0115.1 32895301 Tetratricopeptide repeat [Interproscan]. 0.04 OrthoFinder
XM_002502903.1 MICPUN_97580, 97580 Intraflagellar transport particle protein IFT88 (IFT88) 0.03 OrthoFinder
lcl|BLLF01000857.1_cds_GFH15488.1_9965 HaLaN_11724, GFH15488 Hypothetical protein 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005875 microtubule associated complex IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
CC GO:0030286 dynein complex IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment

No InterPro domains available for this sequence

No external refs found!