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  5. Cpa|evm.model.tig00000093.235

Cpa|evm.model.tig00000093.235 (tig00000093_g3661.t1)


Aliases : tig00000093_g3661.t1

Description : Histidine kinase 3 OS=Arabidopsis thaliana


Gene families : OG_01_0000006 (OrthoFinder) Phylogenetic Tree(s): OG0000006_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000093.235
Cluster HCCA: Cluster_191

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000042.59 tig00000254_g22474.t1 Ethylene receptor 1 OS=Brassica oleracea 0.03 OrthoFinder
Cpa|evm.model.tig00000190.40 tig00000190_g13861.t1 Ethylene receptor OS=Nicotiana tabacum 0.03 OrthoFinder
Cpa|evm.model.tig00020553.260 tig00020553_g10746.t1 Probable histidine kinase 6 OS=Oryza sativa subsp. japonica 0.04 OrthoFinder
Dusal.0212s00007.1 33202592 Hypothetical protein 0.02 OrthoFinder
Dusal.0212s00008.1 33202594 Signal transduction response regulator, receiver domain;... 0.02 OrthoFinder
Dusal.0319s00003.1 33201934 Archaeal/bacterial/fungal rhodopsins; Histidine... 0.02 OrthoFinder
Dusal.0675s00003.1 33202441 Archaeal/bacterial/fungal rhodopsins [Interproscan]. 0.02 OrthoFinder
Sro14_g010640.1 Contig1128.g10813 Respiration control sensor protein ArcB 0.01 OrthoFinder
Sro1939_g306550.1 Contig1997.g17090 Hybrid signal transduction histidine kinase J 0.02 OrthoFinder
lcl|BLLF01000561.1_cds_GFH12981.1_7458 HaLaN_08775, GFH12981 Signal transduction histidine kinase,... 0.04 OrthoFinder
lcl|BLLF01000561.1_cds_GFH12982.1_7459 HaLaN_08776, GFH12982 Signal transduction response regulator, receiver domain... 0.02 OrthoFinder
lcl|BLLF01000625.1_cds_GFH13551.1_8028 HaLaN_09455, GFH13551 Signal transduction histidine kinase,... 0.01 OrthoFinder
lcl|BLLF01003144.1_cds_GFH26484.1_20961 HaLaN_24642, GFH26484 Signal transduction response regulator, receiver domain... 0.02 OrthoFinder
lcl|BLLF01004756.1_cds_GFH30189.1_24666 HaLaN_28989, GFH30189 Signal transduction histidine kinase,... 0.02 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57078.1_9242 PRW57078 Hybrid sensor histidine kinase response regulator 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEA Interproscan
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Enrichment
BP GO:0000271 polysaccharide biosynthetic process IEP Enrichment
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Enrichment
MF GO:0004312 fatty acid synthase activity IEP Enrichment
MF GO:0004318 enoyl-[acyl-carrier-protein] reductase (NADH) activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005956 protein kinase CK2 complex IEP Enrichment
BP GO:0005976 polysaccharide metabolic process IEP Enrichment
BP GO:0006073 cellular glucan metabolic process IEP Enrichment
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Enrichment
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Enrichment
MF GO:0008194 UDP-glycosyltransferase activity IEP Enrichment
BP GO:0009250 glucan biosynthetic process IEP Enrichment
BP GO:0016051 carbohydrate biosynthetic process IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Enrichment
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP Enrichment
MF GO:0016758 hexosyltransferase activity IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Enrichment
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Enrichment
MF GO:0035251 UDP-glucosyltransferase activity IEP Enrichment
BP GO:0044042 glucan metabolic process IEP Enrichment
BP GO:0044262 cellular carbohydrate metabolic process IEP Enrichment
BP GO:0044264 cellular polysaccharide metabolic process IEP Enrichment
MF GO:0046527 glucosyltransferase activity IEP Enrichment
BP GO:0051273 beta-glucan metabolic process IEP Enrichment
BP GO:0051274 beta-glucan biosynthetic process IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR003594 HATPase_C 652 760
IPR001789 Sig_transdc_resp-reg_receiver 1030 1126
IPR001789 Sig_transdc_resp-reg_receiver 776 849
IPR003661 HisK_dim/P 550 604
No external refs found!