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  5. Cz06g31130.t1

Cz06g31130.t1


Description : Pentapeptide repeat [Interproscan].


Gene families : OG_01_0000975 (OrthoFinder) Phylogenetic Tree(s): OG0000975_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz06g31130.t1
Cluster HCCA: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001628.6 tig00001628_g9433.t1 No description available 0.02 OrthoFinder
Cre16.g687300 30777804 Thylakoid lumenal 15 kDa protein 1, chloroplastic... 0.07 OrthoFinder
Cre17.g721700 30782709, CPLD44 Thylakoid lumenal protein TL20.3, chloroplastic... 0.05 OrthoFinder
Dusal.0084s00031.1 33201430 Pentapeptide repeat [Interproscan]. 0.03 OrthoFinder
EOD41761 No alias Pentapeptide repeat [Interproscan]. 0.03 OrthoFinder
Sro352_g124290.1 Contig2645.g21405 Pathogenesis 0.03 OrthoFinder
Sro404_g135940.1 Contig4176.g31854 Thylakoid lumenal 15 kDa protein 0.02 OrthoFinder
Transcript_contig_54693 54693 Pentapeptide repeat [Interproscan]. 0.01 OrthoFinder
XM_002505560.1 MICPUN_54755, 54755 Pentapeptide repeat [Interproscan]. 0.07 OrthoFinder
XM_002505800.1 MICPUN_72613, 72613 Hypothetical protein 0.03 OrthoFinder
XM_003063673.1 MicpuC2_65966, 65966 Pentapeptide repeat [Interproscan]. 0.05 OrthoFinder
lcl|LHPG02000003.1_cds_PRW59735.1_6429 PRW59735 Thylakoid lumenal chloroplastic 0.05 OrthoFinder
lcl|LHPG02000008.1_cds_PRW56837.1_9820 PRW56837 Pentapeptide repeat family 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0004375 glycine dehydrogenase (decarboxylating) activity IEP Enrichment
MF GO:0005261 cation channel activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0006544 glycine metabolic process IEP Enrichment
BP GO:0006546 glycine catabolic process IEP Enrichment
BP GO:0006754 ATP biosynthetic process IEP Enrichment
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP Enrichment
BP GO:0009063 cellular amino acid catabolic process IEP Enrichment
BP GO:0009069 serine family amino acid metabolic process IEP Enrichment
BP GO:0009071 serine family amino acid catabolic process IEP Enrichment
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP Enrichment
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP Enrichment
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP Enrichment
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0010207 photosystem II assembly IEP Enrichment
MF GO:0015252 proton channel activity IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Enrichment
BP GO:0015986 ATP synthesis coupled proton transport IEP Enrichment
BP GO:0016054 organic acid catabolic process IEP Enrichment
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Enrichment
MF GO:0016642 oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
BP GO:0044282 small molecule catabolic process IEP Enrichment
BP GO:0046395 carboxylic acid catabolic process IEP Enrichment
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP Enrichment
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
MF GO:0098809 nitrite reductase activity IEP Enrichment
BP GO:1901565 organonitrogen compound catabolic process IEP Enrichment
BP GO:1901606 alpha-amino acid catabolic process IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR001646 5peptide_repeat 6 41
No external refs found!