Cpa|evm.model.tig00001030.13 (tig00001030_g6453.t1)


Aliases : tig00001030_g6453.t1

Description : Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.IMB3 import karyopherin


Gene families : OG_01_0000711 (OrthoFinder) Phylogenetic Tree(s): OG0000711_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001030.13
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
Cre12.g490850 30791907 Protein translocation.nucleus.nucleocytoplasmic... 0.02 OrthoFinder
Cre14.g633750 30776542 Protein translocation.nucleus.nucleocytoplasmic... 0.04 OrthoFinder
Cz02g21420.t1 No alias HEAT repeats; Importin-beta, N-terminal domain [Interproscan]. 0.04 OrthoFinder
Dusal.0285s00009.1 33192896 HEAT-like repeat [Interproscan]. 0.01 OrthoFinder
EOD25312 No alias Importin-beta, N-terminal domain [Interproscan]. 0.02 OrthoFinder
EOD38465 No alias Importin-beta, N-terminal domain; Importin repeat 4;... 0.05 OrthoFinder
OT_13G02820.1 No alias HEAT-like repeat [Interproscan]. 0.04 OrthoFinder
OT_18G01010.1 No alias Importin repeat 4; HEAT repeats [Interproscan]. 0.06 OrthoFinder
PTI_25G00850.1 No alias Vacuole morphology and inheritance protein 14,... 0.05 OrthoFinder
Sro15_g011250.1 Contig791.g8851 Importin subunit beta-4 0.03 OrthoFinder
UNPLg00185.t1 No alias HEAT repeats; Importin repeat 4 [Interproscan]. 0.02 OrthoFinder
Vocar.0022s0092.1 32891873 HEAT repeat; Importin repeat 4 [Interproscan]. 0.04 OrthoFinder
Vocar.0031s0096.1 32890129 Importin-beta, N-terminal domain; HEAT repeat [Interproscan]. 0.02 OrthoFinder
Vocar.0052s0003.1 32897677 Hypothetical protein 0.01 OrthoFinder
XM_002506661.1 MICPUN_64789, 64789 HEAT-like repeat; Importin-beta, N-terminal domain... 0.03 OrthoFinder
XM_003064319.1 MicpuC2_37032, 37032 HEAT-like repeat; Importin repeat 4 [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01000369.1_cds_GFH11050.1_5527 HaLaN_06482, GFH11050 Importin N-terminal domain-containing protein 0.02 OrthoFinder
lcl|BLLF01001155.1_cds_GFH17486.1_11963 HaLaN_14135, GFH17486 Importin N-terminal domain-containing protein 0.02 OrthoFinder
lcl|BLLF01001155.1_cds_GFH17487.1_11964 HaLaN_14136, GFH17487 Importin N-terminal domain-containing protein 0.01 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61517.1_738 PRW61517 ARM repeat-containing isoform A 0.01 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499564.1_8517 KAA8499564 Importin-5 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
BP GO:0000959 mitochondrial RNA metabolic process IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Enrichment
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0004814 arginine-tRNA ligase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
CC GO:0005739 mitochondrion IEP Enrichment
CC GO:0005741 mitochondrial outer membrane IEP Enrichment
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006420 arginyl-tRNA aminoacylation IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
CC GO:0019867 outer membrane IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
CC GO:0031966 mitochondrial membrane IEP Enrichment
CC GO:0031968 organelle outer membrane IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
CC GO:0098588 bounding membrane of organelle IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR041389 Importin_rep_6 483 545
IPR041653 Importin_rep_4 9 93
No external refs found!