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  5. Cz06g26220.t1

Cz06g26220.t1


Description : IBR domain [Interproscan].


Gene families : OG_01_0000507 (OrthoFinder) Phylogenetic Tree(s): OG0000507_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz06g26220.t1
Cluster HCCA: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
Cz19g01030.t1 No alias IBR domain [Interproscan]. 0.02 OrthoFinder
EOD13010 No alias IBR domain [Interproscan]. 0.02 OrthoFinder
Sro1343_g264600.1 Contig3518.g27228 Probable E3 ubiquitin-protein ligase RNF217 0.02 OrthoFinder
Sro212_g088220.1 Contig3756.g28805 Potential E3 ubiquitin-protein ligase ariadne-2 0.01 OrthoFinder
Sro2_g001650.1 Contig467.g6323 IBR domain-containing protein 1 0.01 OrthoFinder
Transcript_contig_54525 54525 IBR domain [Interproscan]. 0.01 OrthoFinder
Vocar.0024s0099.1 32890434 Zinc finger, C3HC4 RING-type; IBR domain [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000005.1_cds_PRW58138.1_7630 PRW58138 Putative E3 ubiquitin-ligase ARI8 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Enrichment
MF GO:0000295 adenine nucleotide transmembrane transporter activity IEP Enrichment
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005346 purine ribonucleotide transmembrane transporter activity IEP Enrichment
MF GO:0005347 ATP transmembrane transporter activity IEP Enrichment
MF GO:0005471 ATP:ADP antiporter activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
CC GO:0005681 spliceosomal complex IEP Enrichment
BP GO:0005984 disaccharide metabolic process IEP Enrichment
BP GO:0005991 trehalose metabolic process IEP Enrichment
BP GO:0005992 trehalose biosynthetic process IEP Enrichment
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Enrichment
BP GO:0006528 asparagine metabolic process IEP Enrichment
BP GO:0006529 asparagine biosynthetic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006862 nucleotide transport IEP Enrichment
BP GO:0006887 exocytosis IEP Enrichment
MF GO:0008134 transcription factor binding IEP Enrichment
MF GO:0008509 anion transmembrane transporter activity IEP Enrichment
MF GO:0008514 organic anion transmembrane transporter activity IEP Enrichment
BP GO:0009066 aspartate family amino acid metabolic process IEP Enrichment
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Enrichment
BP GO:0009311 oligosaccharide metabolic process IEP Enrichment
BP GO:0009312 oligosaccharide biosynthetic process IEP Enrichment
MF GO:0015215 nucleotide transmembrane transporter activity IEP Enrichment
MF GO:0015216 purine nucleotide transmembrane transporter activity IEP Enrichment
MF GO:0015217 ADP transmembrane transporter activity IEP Enrichment
MF GO:0015291 secondary active transmembrane transporter activity IEP Enrichment
MF GO:0015297 antiporter activity IEP Enrichment
MF GO:0015301 anion:anion antiporter activity IEP Enrichment
MF GO:0015605 organophosphate ester transmembrane transporter activity IEP Enrichment
BP GO:0015748 organophosphate ester transport IEP Enrichment
BP GO:0015931 nucleobase-containing compound transport IEP Enrichment
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
CC GO:0016592 mediator complex IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Enrichment
MF GO:0017025 TBP-class protein binding IEP Enrichment
BP GO:0019725 cellular homeostasis IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
BP GO:0019915 lipid storage IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0022853 active ion transmembrane transporter activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Enrichment
BP GO:0045454 cell redox homeostasis IEP Enrichment
BP GO:0046351 disaccharide biosynthetic process IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051235 maintenance of location IEP Enrichment
CC GO:0099023 vesicle tethering complex IEP Enrichment
MF GO:0140296 general transcription initiation factor binding IEP Enrichment
MF GO:0140323 solute:anion antiporter activity IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR002867 IBR_dom 212 273
IPR002867 IBR_dom 294 330
No external refs found!