Cz06g22090.t1

Description : DSS1/SEM1 [Interproscan].

Gene families : OG_01_0015859 (OrthoFinder) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cz06g22090.t1
Cluster	HCCA: Cluster_101

Target	Alias	Description	ECC score	Gene Family Method	Actions
Cre06.g263750	30779685	RNA processing.messenger ribonucleoprotein particle...	0.03	OrthoFinder
Vocar.0002s0528.1	32890862	DSS1/SEM1 [Interproscan].	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006405	RNA export from nucleus	None	Extended
BP	GO:0006406	mRNA export from nucleus	IEA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006913	nucleocytoplasmic transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
CC	GO:0008541	proteasome regulatory particle, lid subcomplex	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015931	nucleobase-containing compound transport	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034622	cellular protein-containing complex assembly	None	Extended
BP	GO:0043248	proteasome assembly	IEA	Interproscan
BP	GO:0043933	protein-containing complex subunit organization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0050657	nucleic acid transport	None	Extended
BP	GO:0050658	RNA transport	None	Extended
BP	GO:0051028	mRNA transport	None	Extended
BP	GO:0051168	nuclear export	None	Extended
BP	GO:0051169	nuclear transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051236	establishment of RNA localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000226	microtubule cytoskeleton organization	IEP	Enrichment
MF	GO:0003712	transcription coregulator activity	IEP	Enrichment
MF	GO:0003713	transcription coactivator activity	IEP	Enrichment
MF	GO:0004175	endopeptidase activity	IEP	Enrichment
MF	GO:0004190	aspartic-type endopeptidase activity	IEP	Enrichment
MF	GO:0004298	threonine-type endopeptidase activity	IEP	Enrichment
MF	GO:0004592	pantoate-beta-alanine ligase activity	IEP	Enrichment
CC	GO:0005787	signal peptidase complex	IEP	Enrichment
CC	GO:0005789	endoplasmic reticulum membrane	IEP	Enrichment
CC	GO:0005839	proteasome core complex	IEP	Enrichment
BP	GO:0006457	protein folding	IEP	Enrichment
BP	GO:0006465	signal peptide processing	IEP	Enrichment
BP	GO:0006487	protein N-linked glycosylation	IEP	Enrichment
BP	GO:0006497	protein lipidation	IEP	Enrichment
BP	GO:0006505	GPI anchor metabolic process	IEP	Enrichment
BP	GO:0006506	GPI anchor biosynthetic process	IEP	Enrichment
BP	GO:0006508	proteolysis	IEP	Enrichment
BP	GO:0006575	cellular modified amino acid metabolic process	IEP	Enrichment
BP	GO:0006643	membrane lipid metabolic process	IEP	Enrichment
BP	GO:0006644	phospholipid metabolic process	IEP	Enrichment
BP	GO:0006650	glycerophospholipid metabolic process	IEP	Enrichment
BP	GO:0006661	phosphatidylinositol biosynthetic process	IEP	Enrichment
BP	GO:0006664	glycolipid metabolic process	IEP	Enrichment
BP	GO:0006766	vitamin metabolic process	IEP	Enrichment
BP	GO:0006767	water-soluble vitamin metabolic process	IEP	Enrichment
BP	GO:0007010	cytoskeleton organization	IEP	Enrichment
BP	GO:0007051	spindle organization	IEP	Enrichment
MF	GO:0008233	peptidase activity	IEP	Enrichment
CC	GO:0008250	oligosaccharyltransferase complex	IEP	Enrichment
BP	GO:0008610	lipid biosynthetic process	IEP	Enrichment
BP	GO:0008654	phospholipid biosynthetic process	IEP	Enrichment
BP	GO:0009110	vitamin biosynthetic process	IEP	Enrichment
BP	GO:0009247	glycolipid biosynthetic process	IEP	Enrichment
BP	GO:0015939	pantothenate metabolic process	IEP	Enrichment
BP	GO:0015940	pantothenate biosynthetic process	IEP	Enrichment
CC	GO:0016020	membrane	IEP	Enrichment
CC	GO:0016021	integral component of membrane	IEP	Enrichment
CC	GO:0016272	prefoldin complex	IEP	Enrichment
BP	GO:0016485	protein processing	IEP	Enrichment
MF	GO:0016636	oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor	IEP	Enrichment
MF	GO:0016730	oxidoreductase activity, acting on iron-sulfur proteins as donors	IEP	Enrichment
MF	GO:0016780	phosphotransferase activity, for other substituted phosphate groups	IEP	Enrichment
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	Enrichment
MF	GO:0016881	acid-amino acid ligase activity	IEP	Enrichment
BP	GO:0019538	protein metabolic process	IEP	Enrichment
BP	GO:0019637	organophosphate metabolic process	IEP	Enrichment
BP	GO:0022402	cell cycle process	IEP	Enrichment
BP	GO:0031023	microtubule organizing center organization	IEP	Enrichment
CC	GO:0031090	organelle membrane	IEP	Enrichment
CC	GO:0031224	intrinsic component of membrane	IEP	Enrichment
BP	GO:0042364	water-soluble vitamin biosynthetic process	IEP	Enrichment
BP	GO:0042398	cellular modified amino acid biosynthetic process	IEP	Enrichment
BP	GO:0043603	cellular amide metabolic process	IEP	Enrichment
BP	GO:0044255	cellular lipid metabolic process	IEP	Enrichment
BP	GO:0045017	glycerolipid biosynthetic process	IEP	Enrichment
BP	GO:0046467	membrane lipid biosynthetic process	IEP	Enrichment
BP	GO:0046474	glycerophospholipid biosynthetic process	IEP	Enrichment
BP	GO:0046486	glycerolipid metabolic process	IEP	Enrichment
BP	GO:0046488	phosphatidylinositol metabolic process	IEP	Enrichment
MF	GO:0051082	unfolded protein binding	IEP	Enrichment
BP	GO:0051225	spindle assembly	IEP	Enrichment
BP	GO:0051603	proteolysis involved in cellular protein catabolic process	IEP	Enrichment
BP	GO:0051604	protein maturation	IEP	Enrichment
MF	GO:0051743	red chlorophyll catabolite reductase activity	IEP	Enrichment
MF	GO:0070001	aspartic-type peptidase activity	IEP	Enrichment
MF	GO:0070003	threonine-type peptidase activity	IEP	Enrichment
BP	GO:0070925	organelle assembly	IEP	Enrichment
BP	GO:0090407	organophosphate biosynthetic process	IEP	Enrichment
CC	GO:0098796	membrane protein complex	IEP	Enrichment
CC	GO:0110165	cellular anatomical entity	IEP	Enrichment
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Enrichment
CC	GO:0140534	endoplasmic reticulum protein-containing complex	IEP	Enrichment
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Enrichment
CC	GO:1902494	catalytic complex	IEP	Enrichment
BP	GO:1903509	liposaccharide metabolic process	IEP	Enrichment
CC	GO:1905368	peptidase complex	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR007834	DSS1_SEM1	8	55

External Links

No external refs found!

Cz06g22090.t1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation