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  5. Cz06g16240.t1

Cz06g16240.t1


Description : Hemimethylated DNA-binding domain [Interproscan].


Gene families : OG_01_0004799 (OrthoFinder) Phylogenetic Tree(s): OG0004799_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz06g16240.t1
Cluster HCCA: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
Dusal.0956s00004.1 33193524 UVR domain; Hemimethylated DNA-binding domain [Interproscan]. 0.02 OrthoFinder
Vocar.0017s0109.1 32891380 Hemimethylated DNA-binding domain; UVR domain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000759.1_cds_GFH14725.1_9202 HaLaN_10835, GFH14725 UVR domain-containing protein 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000902 cell morphogenesis IEP Enrichment
MF GO:0003729 mRNA binding IEP Enrichment
MF GO:0003779 actin binding IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Enrichment
MF GO:0004107 chorismate synthase activity IEP Enrichment
MF GO:0004601 peroxidase activity IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005685 U1 snRNP IEP Enrichment
BP GO:0005984 disaccharide metabolic process IEP Enrichment
BP GO:0005991 trehalose metabolic process IEP Enrichment
BP GO:0005992 trehalose biosynthetic process IEP Enrichment
BP GO:0006376 mRNA splice site selection IEP Enrichment
BP GO:0006979 response to oxidative stress IEP Enrichment
BP GO:0007010 cytoskeleton organization IEP Enrichment
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0009072 aromatic amino acid family metabolic process IEP Enrichment
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Enrichment
BP GO:0009311 oligosaccharide metabolic process IEP Enrichment
BP GO:0009312 oligosaccharide biosynthetic process IEP Enrichment
BP GO:0009653 anatomical structure morphogenesis IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
BP GO:0016051 carbohydrate biosynthetic process IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Enrichment
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016835 carbon-oxygen lyase activity IEP Enrichment
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Enrichment
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Enrichment
BP GO:0019725 cellular homeostasis IEP Enrichment
MF GO:0019899 enzyme binding IEP Enrichment
BP GO:0022618 ribonucleoprotein complex assembly IEP Enrichment
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Enrichment
MF GO:0031625 ubiquitin protein ligase binding IEP Enrichment
BP GO:0032502 developmental process IEP Enrichment
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Enrichment
BP GO:0042592 homeostatic process IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
MF GO:0044389 ubiquitin-like protein ligase binding IEP Enrichment
BP GO:0045454 cell redox homeostasis IEP Enrichment
BP GO:0046351 disaccharide biosynthetic process IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Enrichment
CC GO:0097525 spliceosomal snRNP complex IEP Enrichment
CC GO:0120114 Sm-like protein family complex IEP Enrichment
InterPro domains Description Start Stop
IPR011722 Hemimethylated_DNA-bd_dom 234 314
No external refs found!