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Description : Hypothetical protein
Gene families : OG_01_0000840 (OrthoFinder) Phylogenetic Tree(s): OG0000840_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cz06g00240.t1 | |
| Cluster | HCCA: Cluster_26 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00000692.75 | tig00000692_g3273.t1 | Small RNA degrading nuclease 5 OS=Arabidopsis thaliana | 0.04 | OrthoFinder | |
| Cre01.g036600 | 30789506 | Small RNA degrading nuclease 3 OS=Arabidopsis thaliana | 0.15 | OrthoFinder | |
| Cre14.g610663 | 30776194 | Small RNA degrading nuclease 5 OS=Arabidopsis thaliana | 0.03 | OrthoFinder | |
| Dusal.0110s00002.1 | 33194354 | Hypothetical protein | 0.03 | OrthoFinder | |
| PTI_03G03700.1 | No alias | Zinc finger, CCCH-type; Exonuclease, RNase T/DNA... | 0.15 | OrthoFinder | |
| Sro1151_g246730.1 | Contig4710.g35024 | Small RNA degrading nuclease | 0.17 | OrthoFinder | |
| TP14G01780.1 | No alias | Exonuclease, RNase T/DNA polymerase III [Interproscan]. | 0.11 | OrthoFinder | |
| Transcript_contig_78401 | 78401 | Exonuclease, RNase T/DNA polymerase III [Interproscan]. | 0.02 | OrthoFinder | |
| XM_002507770.1 | MICPUN_84415, 84415 | Exonuclease, RNase T/DNA polymerase III [Interproscan]. | 0.02 | OrthoFinder | |
| lcl|BLLF01000854.1_cds_GFH15465.1_9942 | HaLaN_11699, GFH15465 | Exonuclease domain-containing protein | 0.01 | OrthoFinder | |
| lcl|BLLF01000914.1_cds_GFH15881.1_10358 | HaLaN_12198, GFH15881 | Exonuclease domain-containing protein | 0.04 | OrthoFinder | |
| lcl|BLLF01001741.1_cds_GFH20998.1_15475 | HaLaN_18211, GFH20998 | Exonuclease domain-containing protein | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000462 | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | IEP | Enrichment |
| BP | GO:0001522 | pseudouridine synthesis | IEP | Enrichment |
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
| MF | GO:0003723 | RNA binding | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| MF | GO:0005515 | protein binding | IEP | Enrichment |
| CC | GO:0005575 | cellular_component | IEP | Enrichment |
| CC | GO:0005634 | nucleus | IEP | Enrichment |
| CC | GO:0005730 | nucleolus | IEP | Enrichment |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0006351 | transcription, DNA-templated | IEP | Enrichment |
| BP | GO:0006364 | rRNA processing | IEP | Enrichment |
| BP | GO:0006396 | RNA processing | IEP | Enrichment |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Enrichment |
| BP | GO:0009451 | RNA modification | IEP | Enrichment |
| BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
| BP | GO:0016072 | rRNA metabolic process | IEP | Enrichment |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Enrichment |
| BP | GO:0030490 | maturation of SSU-rRNA | IEP | Enrichment |
| MF | GO:0030515 | snoRNA binding | IEP | Enrichment |
| CC | GO:0030684 | preribosome | IEP | Enrichment |
| CC | GO:0032040 | small-subunit processome | IEP | Enrichment |
| BP | GO:0032774 | RNA biosynthetic process | IEP | Enrichment |
| BP | GO:0034470 | ncRNA processing | IEP | Enrichment |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Enrichment |
| BP | GO:0042254 | ribosome biogenesis | IEP | Enrichment |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Enrichment |
| CC | GO:0043226 | organelle | IEP | Enrichment |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Enrichment |
| CC | GO:0043229 | intracellular organelle | IEP | Enrichment |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Enrichment |
| BP | GO:0044085 | cellular component biogenesis | IEP | Enrichment |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Enrichment |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Enrichment |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | Enrichment |
| CC | GO:0110165 | cellular anatomical entity | IEP | Enrichment |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Enrichment |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Enrichment |
No InterPro domains available for this sequence
| No external refs found! |