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  5. Cz05g35200.t1

Cz05g35200.t1


Description : Ion transport domain; Cyclic nucleotide-binding domain [Interproscan].


Gene families : OG_01_0000079 (OrthoFinder) Phylogenetic Tree(s): OG0000079_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz05g35200.t1
Cluster HCCA: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000711.58 tig00000711_g3420.t1 Potassium channel KOR1 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder
Cpa|evm.model.tig00000851.5 tig00000851_g4889.t1 Putative cyclic nucleotide-gated ion channel 8... 0.02 OrthoFinder
Cpa|evm.model.tig00020960.51 tig00020960_g16577.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00021244.33 tig00021244_g19588.t1 Putative cyclic nucleotide-gated ion channel 9... 0.02 OrthoFinder
EOD10747 No alias Cyclic nucleotide binding K+ channel [Ensembl]. 0.03 OrthoFinder
SymbC1.scaffold758.4 758.4 Cyclic nucleotide-binding domain [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold84.10 84.10 Cyclic nucleotide-binding domain; Ion transport domain... 0.02 OrthoFinder
Vocar.0001s0515.1 32886177 Ion transport domain; Cyclic nucleotide-binding domain... 0.03 OrthoFinder
Vocar.0021s0070.1 32895856 Ion transport domain; Cyclic nucleotide-binding domain... 0.02 OrthoFinder
Vocar.0082s0001.1 32886964 Cyclic nucleotide-binding domain [Interproscan]. 0.02 OrthoFinder
XM_002506035.1 MICPUN_103982, 103982 Voltage-gated ion channel superfamily 0.02 OrthoFinder
lcl|BLLF01000349.1_cds_GFH10809.1_5286 HaLaN_06192, GFH10809 Cyclic nucleotide-binding domain-containing protein 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA Interproscan
BP GO:0006811 ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Enrichment
BP GO:0006887 exocytosis IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030126 COPI vesicle coat IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
CC GO:0099023 vesicle tethering complex IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment
InterPro domains Description Start Stop
IPR000595 cNMP-bd_dom 731 775
IPR005821 Ion_trans_dom 266 515
No external refs found!