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  5. Cz05g20010.t1

Cz05g20010.t1


Description : Mur ligase, C-terminal; Mur ligase, central [Interproscan].


Gene families : OG_01_0003485 (OrthoFinder) Phylogenetic Tree(s): OG0003485_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz05g20010.t1
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
Cre12.g519900 30791765 RNA biosynthesis.organelle machineries.RNA polymerase... 0.03 OrthoFinder
OT_14G02500.1 No alias Mur ligase, C-terminal; Mur ligase, central [Interproscan]. 0.04 OrthoFinder
XM_002505375.1 MICPUN_67737, 67737 Mur ligase, central; Mur ligase, C-terminal; Mur ligase,... 0.03 OrthoFinder
XM_003059649.1 MicpuC2_18633, 18633 Mur ligase, N-terminal catalytic domain; Mur ligase,... 0.02 OrthoFinder
lcl|BLLF01000309.1_cds_GFH10362.1_4839 HaLaN_05662, GFH10362 Hypothetical protein 0.02 OrthoFinder
lcl|BLLF01000309.1_cds_GFH10363.1_4840 HaLaN_05663, GFH10363 Hypothetical protein 0.02 OrthoFinder
lcl|BLLF01000359.1_cds_GFH10923.1_5400 HaLaN_06328, GFH10923 Mur ligase, C-terminal [Interproscan]. 0.03 OrthoFinder
lcl|LHPG02000005.1_cds_PRW58479.1_7908 PRW58479 Ligase 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0009058 biosynthetic process IEA Interproscan
MF GO:0016874 ligase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0004827 proline-tRNA ligase activity IEP Enrichment
MF GO:0004832 valine-tRNA ligase activity IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006433 prolyl-tRNA aminoacylation IEP Enrichment
BP GO:0006438 valyl-tRNA aminoacylation IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006547 histidine metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
CC GO:0009507 chloroplast IEP Enrichment
CC GO:0009536 plastid IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
CC GO:0019867 outer membrane IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0070569 uridylyltransferase activity IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR013221 Mur_ligase_cen 223 460
IPR004101 Mur_ligase_C 481 572
No external refs found!