Description : Up-frameshift suppressor 2, C-terminal; MIF4G-like, type 3 [Interproscan].
Gene families : OG_01_0002867 (OrthoFinder) Phylogenetic Tree(s): OG0002867_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Cz05g14090.t1 | |
Cluster | HCCA: Cluster_149 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cpa|evm.model.tig00022080.18 | tig00022080_g23802.t1 | Regulator of nonsense transcripts UPF2 OS=Arabidopsis thaliana | 0.03 | OrthoFinder | |
Cre17.g729250 | 30782291, UPF2 | RNA processing.RNA quality control Exon Junction complex... | 0.02 | OrthoFinder | |
EOD19187 | No alias | Up-frameshift suppressor 2, C-terminal [Interproscan]. | 0.01 | OrthoFinder | |
Sro1269_g257860.1 | Contig3033.g24207 | Regulator of nonsense transcripts | 0.01 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEA | Interproscan |
MF | GO:0005515 | protein binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
MF | GO:0003682 | chromatin binding | IEP | Enrichment |
MF | GO:0003909 | DNA ligase activity | IEP | Enrichment |
MF | GO:0003911 | DNA ligase (NAD+) activity | IEP | Enrichment |
MF | GO:0004177 | aminopeptidase activity | IEP | Enrichment |
MF | GO:0004363 | glutathione synthase activity | IEP | Enrichment |
MF | GO:0005215 | transporter activity | IEP | Enrichment |
MF | GO:0005524 | ATP binding | IEP | Enrichment |
CC | GO:0005681 | spliceosomal complex | IEP | Enrichment |
BP | GO:0006334 | nucleosome assembly | IEP | Enrichment |
BP | GO:0006749 | glutathione metabolic process | IEP | Enrichment |
BP | GO:0006750 | glutathione biosynthetic process | IEP | Enrichment |
BP | GO:0006810 | transport | IEP | Enrichment |
BP | GO:0006897 | endocytosis | IEP | Enrichment |
MF | GO:0015399 | primary active transmembrane transporter activity | IEP | Enrichment |
MF | GO:0016881 | acid-amino acid ligase activity | IEP | Enrichment |
MF | GO:0016886 | ligase activity, forming phosphoric ester bonds | IEP | Enrichment |
MF | GO:0016887 | ATPase | IEP | Enrichment |
MF | GO:0017076 | purine nucleotide binding | IEP | Enrichment |
BP | GO:0019184 | nonribosomal peptide biosynthetic process | IEP | Enrichment |
MF | GO:0019239 | deaminase activity | IEP | Enrichment |
MF | GO:0022804 | active transmembrane transporter activity | IEP | Enrichment |
MF | GO:0022857 | transmembrane transporter activity | IEP | Enrichment |
MF | GO:0030145 | manganese ion binding | IEP | Enrichment |
MF | GO:0030554 | adenyl nucleotide binding | IEP | Enrichment |
MF | GO:0032553 | ribonucleotide binding | IEP | Enrichment |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Enrichment |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Enrichment |
BP | GO:0034728 | nucleosome organization | IEP | Enrichment |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Enrichment |
MF | GO:0036094 | small molecule binding | IEP | Enrichment |
BP | GO:0042398 | cellular modified amino acid biosynthetic process | IEP | Enrichment |
MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEP | Enrichment |
MF | GO:0043167 | ion binding | IEP | Enrichment |
MF | GO:0043168 | anion binding | IEP | Enrichment |
BP | GO:0051179 | localization | IEP | Enrichment |
BP | GO:0051234 | establishment of localization | IEP | Enrichment |
BP | GO:0055085 | transmembrane transport | IEP | Enrichment |
BP | GO:0065004 | protein-DNA complex assembly | IEP | Enrichment |
BP | GO:0071824 | protein-DNA complex subunit organization | IEP | Enrichment |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Enrichment |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Enrichment |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
No external refs found! |