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  5. Cz04g06050.t1

Cz04g06050.t1


Description : K Homology domain, type 1; WW domain [Interproscan].


Gene families : OG_01_0000189 (OrthoFinder) Phylogenetic Tree(s): OG0000189_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz04g06050.t1
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
Dusal.0174s00001.1 33196261 K Homology domain, type 1 [Interproscan]. 0.02 OrthoFinder
Dusal.0481s00010.1 33201483 K Homology domain, type 1; WW domain [Interproscan]. 0.03 OrthoFinder
EOD09616 No alias K Homology domain, type 1 [Interproscan]. 0.03 OrthoFinder
Sro133_g063130.1 Contig2274.g18872 K Homology domain, type 1 [Interproscan]. 0.02 OrthoFinder
Sro84_g044640.1 Contig220.g2597 Far upstream element-binding protein 2 0.04 OrthoFinder
SymbC1.scaffold2518.1 2518.1 K Homology domain, type 1 [Interproscan]. 0.02 OrthoFinder
TP05G02060.1 No alias WW domain; K Homology domain, type 1 [Interproscan]. 0.02 OrthoFinder
XM_003060543.1 MicpuC2_47841, 47841 K Homology domain, type 1; WW domain [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
MF GO:0031369 translation initiation factor binding IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 278 338
IPR004088 KH_dom_type_1 200 261
IPR004088 KH_dom_type_1 360 420
IPR001202 WW_dom 587 612
No external refs found!