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  5. Cz04g00170.t1

Cz04g00170.t1


Description : ABC transporter periplasmic binding domain [Interproscan].


Gene families : OG_01_0001373 (OrthoFinder) Phylogenetic Tree(s): OG0001373_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz04g00170.t1
Cluster HCCA: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
Cre06.g266800 30779492 No description available 0.01 OrthoFinder
EOD18086 No alias Hypothetical protein [Ensembl]. 0.02 OrthoFinder
TP06G07560.1 No alias Protein of unknown function DUF5522; ABC transporter... 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004190 aspartic-type endopeptidase activity IEP Enrichment
MF GO:0004252 serine-type endopeptidase activity IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
MF GO:0070001 aspartic-type peptidase activity IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
InterPro domains Description Start Stop
IPR002491 ABC_transptr_periplasmic_BD 6 274
No external refs found!