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  5. Cz03g32240.t1

Cz03g32240.t1


Description : Polycystin cation channel, PKD1/PKD2 [Interproscan].


Gene families : OG_01_0001490 (OrthoFinder) Phylogenetic Tree(s): OG0001490_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz03g32240.t1
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001535.3 tig00001535_g9284.t1 No description available 0.03 OrthoFinder
Cre17.g715300 30782850 No description available 0.08 OrthoFinder
Dusal.0290s00022.1 33198649 Polycystin cation channel, PKD1/PKD2 [Interproscan]. 0.04 OrthoFinder
Dusal.0313s00013.1 33202817 Polycystin cation channel, PKD1/PKD2 [Interproscan]. 0.02 OrthoFinder
Dusal.0456s00009.1 33199038 Hypothetical protein 0.08 OrthoFinder
SymbC1.scaffold587.1 587.1 Polycystin cation channel, PKD1/PKD2 [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold8202.2 8202.2 Hypothetical protein 0.02 OrthoFinder
XM_002506375.1 MICPUN_64572, 64572 Polycystin cation channel family 0.02 OrthoFinder
XM_003064328.1 MicpuC2_49212, 49212 Polycystin cation channel, PKD1/PKD2 [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000045.1_cds_GFH06573.1_1050 HaLaN_01226, GFH06573 PKD_channel domain-containing protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005875 microtubule associated complex IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
BP GO:0006813 potassium ion transport IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
CC GO:0030286 dynein complex IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
InterPro domains Description Start Stop
IPR013122 PKD1_2_channel 1036 1362
No external refs found!