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  5. Cz03g26100.t1

Cz03g26100.t1


Description : Pre-mRNA polyadenylation factor Fip1 domain [Interproscan].


Gene families : OG_01_0004606 (OrthoFinder) Phylogenetic Tree(s): OG0004606_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz03g26100.t1
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
Cre17.g745547 30782778 No description available 0.07 OrthoFinder
XM_002504143.1 MICPUN_61138, 61138 Pre-mRNA polyadenylation factor Fip1 domain; Zinc... 0.03 OrthoFinder
lcl|LHPG02000010.1_cds_PRW51099.1_776 PRW51099 Glycosyltransferase LARGE1 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint signaling IEP Enrichment
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Enrichment
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003887 DNA-directed DNA polymerase activity IEP Enrichment
MF GO:0003964 RNA-directed DNA polymerase activity IEP Enrichment
MF GO:0003980 UDP-glucose:glycoprotein glucosyltransferase activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
MF GO:0004674 protein serine/threonine kinase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
CC GO:0005887 integral component of plasma membrane IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0006401 RNA catabolic process IEP Enrichment
BP GO:0006402 mRNA catabolic process IEP Enrichment
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP Enrichment
BP GO:0006913 nucleocytoplasmic transport IEP Enrichment
BP GO:0007088 regulation of mitotic nuclear division IEP Enrichment
BP GO:0007093 mitotic cell cycle checkpoint signaling IEP Enrichment
BP GO:0007094 mitotic spindle assembly checkpoint signaling IEP Enrichment
BP GO:0007346 regulation of mitotic cell cycle IEP Enrichment
MF GO:0008170 N-methyltransferase activity IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
MF GO:0008276 protein methyltransferase activity IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
BP GO:0009306 protein secretion IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0009966 regulation of signal transduction IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0010564 regulation of cell cycle process IEP Enrichment
BP GO:0010629 negative regulation of gene expression IEP Enrichment
BP GO:0010639 negative regulation of organelle organization IEP Enrichment
BP GO:0010646 regulation of cell communication IEP Enrichment
BP GO:0010948 negative regulation of cell cycle process IEP Enrichment
BP GO:0010965 regulation of mitotic sister chromatid separation IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
MF GO:0016278 lysine N-methyltransferase activity IEP Enrichment
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Enrichment
MF GO:0017056 structural constituent of nuclear pore IEP Enrichment
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
BP GO:0023051 regulation of signaling IEP Enrichment
BP GO:0030071 regulation of mitotic metaphase/anaphase transition IEP Enrichment
CC GO:0031226 intrinsic component of plasma membrane IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
BP GO:0031577 spindle checkpoint signaling IEP Enrichment
BP GO:0032012 regulation of ARF protein signal transduction IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
BP GO:0033043 regulation of organelle organization IEP Enrichment
BP GO:0033044 regulation of chromosome organization IEP Enrichment
BP GO:0033045 regulation of sister chromatid segregation IEP Enrichment
BP GO:0033046 negative regulation of sister chromatid segregation IEP Enrichment
BP GO:0033047 regulation of mitotic sister chromatid segregation IEP Enrichment
BP GO:0033048 negative regulation of mitotic sister chromatid segregation IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
MF GO:0035251 UDP-glucosyltransferase activity IEP Enrichment
BP GO:0035592 establishment of protein localization to extracellular region IEP Enrichment
MF GO:0042054 histone methyltransferase activity IEP Enrichment
BP GO:0045786 negative regulation of cell cycle IEP Enrichment
BP GO:0045839 negative regulation of mitotic nuclear division IEP Enrichment
BP GO:0045841 negative regulation of mitotic metaphase/anaphase transition IEP Enrichment
BP GO:0045930 negative regulation of mitotic cell cycle IEP Enrichment
MF GO:0046527 glucosyltransferase activity IEP Enrichment
BP GO:0046578 regulation of Ras protein signal transduction IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
BP GO:0048519 negative regulation of biological process IEP Enrichment
BP GO:0048583 regulation of response to stimulus IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Enrichment
BP GO:0051128 regulation of cellular component organization IEP Enrichment
BP GO:0051129 negative regulation of cellular component organization IEP Enrichment
BP GO:0051169 nuclear transport IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0051726 regulation of cell cycle IEP Enrichment
BP GO:0051783 regulation of nuclear division IEP Enrichment
BP GO:0051784 negative regulation of nuclear division IEP Enrichment
BP GO:0051983 regulation of chromosome segregation IEP Enrichment
BP GO:0051985 negative regulation of chromosome segregation IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0071173 spindle assembly checkpoint signaling IEP Enrichment
BP GO:0071174 mitotic spindle checkpoint signaling IEP Enrichment
BP GO:0071692 protein localization to extracellular region IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901987 regulation of cell cycle phase transition IEP Enrichment
BP GO:1901988 negative regulation of cell cycle phase transition IEP Enrichment
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP Enrichment
BP GO:1901991 negative regulation of mitotic cell cycle phase transition IEP Enrichment
BP GO:1902099 regulation of metaphase/anaphase transition of cell cycle IEP Enrichment
BP GO:1902100 negative regulation of metaphase/anaphase transition of cell cycle IEP Enrichment
BP GO:1902531 regulation of intracellular signal transduction IEP Enrichment
BP GO:1903047 mitotic cell cycle process IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:1905818 regulation of chromosome separation IEP Enrichment
BP GO:1905819 negative regulation of chromosome separation IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2000816 negative regulation of mitotic sister chromatid separation IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
BP GO:2001251 negative regulation of chromosome organization IEP Enrichment
InterPro domains Description Start Stop
IPR007854 Fip1_dom 313 354
No external refs found!