Cz03g22200.t1


Description : Porphobilinogen deaminase, C-terminal; Porphobilinogen deaminase, N-terminal [Interproscan].


Gene families : OG_01_0001267 (OrthoFinder) Phylogenetic Tree(s): OG0001267_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz03g22200.t1
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000241.50 tig00000241_g20912.t1 Coenzyme metabolism.tetrapyrrol... 0.06 OrthoFinder
Cre16.g663900 30777054 Coenzyme metabolism.tetrapyrrol... 0.21 OrthoFinder
Dusal.0145s00001.1 33195901 Porphobilinogen deaminase, N-terminal; Porphobilinogen... 0.04 OrthoFinder
EOD30502 No alias Porphobilinogen deaminase, N-terminal; Porphobilinogen... 0.04 OrthoFinder
OT_05G01260.1 No alias Porphobilinogen deaminase, N-terminal; Porphobilinogen... 0.14 OrthoFinder
PTI_06G02850.1 No alias Porphobilinogen deaminase, C-terminal; Porphobilinogen... 0.12 OrthoFinder
Sro10_g008400.1 Contig1.g64 Porphobilinogen deaminase 0.1 OrthoFinder
TP12G01000.1 No alias Porphobilinogen deaminase, C-terminal; Porphobilinogen... 0.08 OrthoFinder
Transcript_contig_56407 56407 Porphobilinogen deaminase, N-terminal; Porphobilinogen... 0.05 OrthoFinder
Vocar.0041s0034.1 32888740 Porphobilinogen deaminase, C-terminal; Porphobilinogen... 0.06 OrthoFinder
XM_002507518.1 MICPUN_78011, 78011 Hydroxymethylbilane synthase (HMBS) 0.03 OrthoFinder
XM_003056504.1 MicpuC2_31842, 31842 Porphobilinogen deaminase, chloroplast precursor (HEMC) 0.03 OrthoFinder
lcl|BLLF01008196.1_cds_GFH33283.1_27760 HaLaN_32630, GFH33283 Hypothetical protein 0.02 OrthoFinder
lcl|LHPG02000001.1_cds_PRW60963.1_596 PRW60963 Porphobilinogen deaminase 0.1 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004418 hydroxymethylbilane synthase activity IEA Interproscan
BP GO:0033014 tetrapyrrole biosynthetic process IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Enrichment
MF GO:0004655 porphobilinogen synthase activity IEP Enrichment
MF GO:0004852 uroporphyrinogen-III synthase activity IEP Enrichment
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006605 protein targeting IEP Enrichment
BP GO:0006612 protein targeting to membrane IEP Enrichment
BP GO:0006613 cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
MF GO:0008312 7S RNA binding IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
CC GO:0009507 chloroplast IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009522 photosystem I IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009536 plastid IEP Enrichment
CC GO:0009538 photosystem I reaction center IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0010109 regulation of photosynthesis IEP Enrichment
BP GO:0010207 photosystem II assembly IEP Enrichment
MF GO:0010242 oxygen evolving activity IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
BP GO:0015994 chlorophyll metabolic process IEP Enrichment
BP GO:0015995 chlorophyll biosynthetic process IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
MF GO:0016835 carbon-oxygen lyase activity IEP Enrichment
MF GO:0016836 hydro-lyase activity IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
MF GO:0030145 manganese ion binding IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0033365 protein localization to organelle IEP Enrichment
BP GO:0034613 cellular protein localization IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0042440 pigment metabolic process IEP Enrichment
BP GO:0042548 regulation of photosynthesis, light reaction IEP Enrichment
BP GO:0042549 photosystem II stabilization IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
BP GO:0045047 protein targeting to ER IEP Enrichment
BP GO:0046148 pigment biosynthetic process IEP Enrichment
MF GO:0046406 magnesium protoporphyrin IX methyltransferase activity IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
CC GO:0048500 signal recognition particle IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0051668 localization within membrane IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0070727 cellular macromolecule localization IEP Enrichment
BP GO:0070972 protein localization to endoplasmic reticulum IEP Enrichment
MF GO:0071949 FAD binding IEP Enrichment
BP GO:0072594 establishment of protein localization to organelle IEP Enrichment
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072657 protein localization to membrane IEP Enrichment
BP GO:0090150 establishment of protein localization to membrane IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR022418 Porphobilinogen_deaminase_C 277 348
IPR022417 Porphobilin_deaminase_N 52 260
No external refs found!