1. Home
  2. Species
  3. Chromochloris zofingiensis
  4. Sequence
  5. Cz03g20190.t1

Cz03g20190.t1


Description : Serine hydroxymethyltransferase-like domain [Interproscan].


Gene families : OG_01_0000330 (OrthoFinder) Phylogenetic Tree(s): OG0000330_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz03g20190.t1
Cluster HCCA: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001130.31 tig00001130_g7262.t1 Enzyme classification.EC_2 transferases.EC_2.1... 0.03 OrthoFinder
Cre16.g664550 30776923, SHMT1 Amino acid metabolism.biosynthesis.serine... 0.04 OrthoFinder
EOD40427 No alias Serine hydroxymethyltransferase [Ensembl]. 0.03 OrthoFinder
OT_14G02690.1 No alias Serine hydroxymethyltransferase-like domain [Interproscan]. 0.08 OrthoFinder
PTI_01G07740.1 No alias Serine hydroxymethyltransferase-like domain [Interproscan]. 0.04 OrthoFinder
Sro30_g019890.1 Contig3962.g30389 Serine hydroxymethyltransferase 0.02 OrthoFinder
TP18G01090.1 No alias Serine hydroxymethyltransferase-like domain [Interproscan]. 0.03 OrthoFinder
Transcript_contig_56285 56285 Serine hydroxymethyltransferase-like domain [Interproscan]. 0.07 OrthoFinder
Vocar.0041s0018.1 32888726 Serine hydroxymethyltransferase-like domain [Interproscan]. 0.04 OrthoFinder
XM_003059639.1 MicpuC2_49634, 49634 Serine hydroxymethyltransferase-like domain [Interproscan]. 0.03 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61055.1_24 PRW61055 Serine hydroxymethyltransferase 0.14 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
MF GO:0004375 glycine dehydrogenase (decarboxylating) activity IEP Enrichment
BP GO:0006544 glycine metabolic process IEP Enrichment
BP GO:0006546 glycine catabolic process IEP Enrichment
BP GO:0009063 cellular amino acid catabolic process IEP Enrichment
BP GO:0009069 serine family amino acid metabolic process IEP Enrichment
BP GO:0009071 serine family amino acid catabolic process IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
BP GO:0016054 organic acid catabolic process IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Enrichment
MF GO:0016642 oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0044282 small molecule catabolic process IEP Enrichment
BP GO:0046395 carboxylic acid catabolic process IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:1901565 organonitrogen compound catabolic process IEP Enrichment
BP GO:1901606 alpha-amino acid catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR039429 SHMT-like_dom 60 459
No external refs found!