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  5. Cz03g17160.t1

Cz03g17160.t1


Description : Calponin homology domain [Interproscan].


Gene families : OG_01_0002564 (OrthoFinder) Phylogenetic Tree(s): OG0002564_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz03g17160.t1
Cluster HCCA: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000949.32 tig00000949_g5746.t1 No description available 0.04 OrthoFinder
Cpa|evm.model.tig00021179.27 tig00021179_g19242.t1 No description available 0.03 OrthoFinder
Cre17.g704300 30782660, FAP47 No description available 0.08 OrthoFinder
Dusal.0323s00006.1 33192405 Abnormal spindle-like microcephaly-associated protein,... 0.09 OrthoFinder
EOD24780 No alias Hypothetical protein [Ensembl]. 0.03 OrthoFinder
EOD32033 No alias Flagellar-associated PapD-like [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold1352.2 1352.2 Hypothetical protein 0.02 OrthoFinder
Vocar.0004s0205.1 32889434 Calponin homology domain; Flagellar-associated PapD-like... 0.03 OrthoFinder
XM_002502822.1 MICPUN_104861, 104861 Flagellar associated protein (FAP47) 0.05 OrthoFinder
XM_003060936.1 MicpuC2_60791, 60791 Hypothetical protein 0.03 OrthoFinder
lcl|BLLF01000368.1_cds_GFH11031.1_5508 HaLaN_06460, GFH11031 Hypothetical protein 0.02 OrthoFinder
lcl|BLLF01000368.1_cds_GFH11035.1_5512 HaLaN_06464, GFH11035 Calponin-homology (CH) domain-containing protein 0.06 OrthoFinder
lcl|BLLF01000368.1_cds_GFH11038.1_5515 HaLaN_06467, GFH11038 Calponin-homology (CH) domain-containing protein 0.05 OrthoFinder
lcl|BLLF01000731.1_cds_GFH14484.1_8961 HaLaN_10548, GFH14484 Calponin-homology (CH) domain-containing protein 0.07 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0003887 DNA-directed DNA polymerase activity IEP Enrichment
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005875 microtubule associated complex IEP Enrichment
BP GO:0006753 nucleoside phosphate metabolic process IEP Enrichment
BP GO:0006813 potassium ion transport IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0009117 nucleotide metabolic process IEP Enrichment
BP GO:0009165 nucleotide biosynthetic process IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0019637 organophosphate metabolic process IEP Enrichment
CC GO:0030286 dynein complex IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0090407 organophosphate biosynthetic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
InterPro domains Description Start Stop
IPR001715 CH-domain 1625 1728
No external refs found!