Cz03g11100.t1

Description : ABC-2 type transporter; ABC transporter-like [Interproscan].

Gene families : OG_01_0000021 (OrthoFinder) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cz03g11100.t1
Cluster	HCCA: Cluster_32

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00001130.22	tig00001130_g7252.t1	ABC transporter G family member 22 OS=Arabidopsis thaliana	0.02	OrthoFinder
Cpa\|evm.model.tig00020685.31	tig00020685_g12947.t1	ABC transporter G family member 22 OS=Arabidopsis thaliana	0.01	OrthoFinder
Cre05.g241350	30783120	ABC transporter G family member 28 OS=Arabidopsis thaliana	0.02	OrthoFinder
Cz09g11220.t1	No alias	ABC-2 type transporter; ABC transporter-like [Interproscan].	0.04	OrthoFinder
Cz11g07110.t1	No alias	ABC-2 type transporter; ABC transporter-like [Interproscan].	0.05	OrthoFinder
Transcript_contig_56456	56456	Hypothetical protein	0.02	OrthoFinder
Transcript_contig_61805	61805	ABC-2 type transporter; ABC transporter-like [Interproscan].	0.01	OrthoFinder
lcl\|BLLF01000963.1_cds_GFH16217.1_10694	HaLaN_12597, GFH16217	ABC transporter-like [Interproscan].	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0016887	ATPase	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004175	endopeptidase activity	IEP	Enrichment
MF	GO:0004252	serine-type endopeptidase activity	IEP	Enrichment
BP	GO:0006629	lipid metabolic process	IEP	Enrichment
BP	GO:0006631	fatty acid metabolic process	IEP	Enrichment
BP	GO:0006633	fatty acid biosynthetic process	IEP	Enrichment
BP	GO:0007155	cell adhesion	IEP	Enrichment
MF	GO:0008374	O-acyltransferase activity	IEP	Enrichment
BP	GO:0008610	lipid biosynthetic process	IEP	Enrichment
BP	GO:0016053	organic acid biosynthetic process	IEP	Enrichment
MF	GO:0016746	acyltransferase activity	IEP	Enrichment
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	Enrichment
MF	GO:0016840	carbon-nitrogen lyase activity	IEP	Enrichment
MF	GO:0016843	amine-lyase activity	IEP	Enrichment
MF	GO:0016844	strictosidine synthase activity	IEP	Enrichment
BP	GO:0022610	biological adhesion	IEP	Enrichment
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	Enrichment
BP	GO:0044255	cellular lipid metabolic process	IEP	Enrichment
BP	GO:0044283	small molecule biosynthetic process	IEP	Enrichment
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	Enrichment
BP	GO:0072330	monocarboxylic acid biosynthetic process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR013525	ABC_2_trans	383	591
IPR003439	ABC_transporter-like_ATP-bd	30	183

External Links

No external refs found!