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  5. Cz03g10180.t1

Cz03g10180.t1


Description : Glycosyl hydrolase, family 13, catalytic domain; Alpha-amylase/branching enzyme, C-terminal all beta; Glycoside hydrolase, family 13, N-terminal [Interproscan].


Gene families : OG_01_0000579 (OrthoFinder) Phylogenetic Tree(s): OG0000579_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz03g10180.t1
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021432.19 tig00021432_g21211.t1 Carbohydrate metabolism.starch... 0.01 OrthoFinder
Dusal.0572s00007.1 33202694 Alpha-amylase/branching enzyme, C-terminal all beta... 0.02 OrthoFinder
OT_04G03980.1 No alias Glycoside hydrolase, family 13, N-terminal; Glycosyl... 0.02 OrthoFinder
Vocar.0002s0315.1 32891138 Glycosyl hydrolase, family 13, catalytic domain;... 0.03 OrthoFinder
Vocar.0013s0009.1 32896275 Glycosyl hydrolase, family 13, catalytic domain;... 0.02 OrthoFinder
Vocar.0026s0071.1 32892436 Glycosyl hydrolase, family 13, catalytic domain;... 0.03 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60631.1_4500 PRW60631 Starch branching enzyme I 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
MF GO:0043169 cation binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000295 adenine nucleotide transmembrane transporter activity IEP Enrichment
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
MF GO:0000976 transcription cis-regulatory region binding IEP Enrichment
MF GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding IEP Enrichment
MF GO:0001067 transcription regulatory region nucleic acid binding IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0004177 aminopeptidase activity IEP Enrichment
MF GO:0004329 formate-tetrahydrofolate ligase activity IEP Enrichment
MF GO:0004371 glycerone kinase activity IEP Enrichment
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005346 purine ribonucleotide transmembrane transporter activity IEP Enrichment
MF GO:0005347 ATP transmembrane transporter activity IEP Enrichment
MF GO:0005471 ATP:ADP antiporter activity IEP Enrichment
BP GO:0006071 glycerol metabolic process IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006862 nucleotide transport IEP Enrichment
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Enrichment
CC GO:0008303 caspase complex IEP Enrichment
MF GO:0008509 anion transmembrane transporter activity IEP Enrichment
MF GO:0008514 organic anion transmembrane transporter activity IEP Enrichment
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Enrichment
MF GO:0015215 nucleotide transmembrane transporter activity IEP Enrichment
MF GO:0015216 purine nucleotide transmembrane transporter activity IEP Enrichment
MF GO:0015217 ADP transmembrane transporter activity IEP Enrichment
MF GO:0015291 secondary active transmembrane transporter activity IEP Enrichment
MF GO:0015297 antiporter activity IEP Enrichment
MF GO:0015301 anion:anion antiporter activity IEP Enrichment
MF GO:0015605 organophosphate ester transmembrane transporter activity IEP Enrichment
BP GO:0015748 organophosphate ester transport IEP Enrichment
BP GO:0015931 nucleobase-containing compound transport IEP Enrichment
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
BP GO:0016255 attachment of GPI anchor to protein IEP Enrichment
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
MF GO:0016860 intramolecular oxidoreductase activity IEP Enrichment
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
BP GO:0019400 alditol metabolic process IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0022853 active ion transmembrane transporter activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
MF GO:0032422 purine-rich negative regulatory element binding IEP Enrichment
CC GO:0042765 GPI-anchor transamidase complex IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0140323 solute:anion antiporter activity IEP Enrichment
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1905368 peptidase complex IEP Enrichment
CC GO:1905369 endopeptidase complex IEP Enrichment
MF GO:1990837 sequence-specific double-stranded DNA binding IEP Enrichment
InterPro domains Description Start Stop
IPR006048 A-amylase/branching_C 652 746
IPR004193 Glyco_hydro_13_N 120 201
IPR006047 Glyco_hydro_13_cat_dom 273 343
No external refs found!