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  5. Cz03g08020.t1

Cz03g08020.t1


Description : OB-fold nucleic acid binding domain, AA-tRNA synthetase-type [Interproscan].


Gene families : OG_01_0003292 (OrthoFinder) Phylogenetic Tree(s): OG0003292_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz03g08020.t1
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
Cre02.g100000 30785704 Cell cycle.mitosis and meiosis.meiotic recombination.DNA... 0.02 OrthoFinder
Sro461_g147680.1 Contig3552.g27422 Replication protein A 32 kDa subunit 0.01 OrthoFinder
Vocar.0012s0105.1 32894898 OB-fold nucleic acid binding domain, AA-tRNA... 0.02 OrthoFinder
XM_003058768.1 MicpuC2_57959, 57959 OB-fold nucleic acid binding domain, AA-tRNA... 0.01 OrthoFinder
lcl|BLLF01000593.1_cds_GFH13281.1_7758 HaLaN_09131, GFH13281 RPA_C domain-containing protein 0.02 OrthoFinder
lcl|LHPG02000009.1_cds_PRW56187.1_10019 PRW56187 Replication A 32 kDa subunit A-like 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004180 carboxypeptidase activity IEP Enrichment
MF GO:0004185 serine-type carboxypeptidase activity IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
MF GO:0008238 exopeptidase activity IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
MF GO:0070008 serine-type exopeptidase activity IEP Enrichment
InterPro domains Description Start Stop
IPR004365 NA-bd_OB_tRNA 74 151
No external refs found!