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  5. Cz03g02020.t1

Cz03g02020.t1


Description : Pectate lyase superfamily protein [Interproscan].


Gene families : OG_01_0001489 (OrthoFinder) Phylogenetic Tree(s): OG0001489_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz03g02020.t1
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
Transcript_contig_54339 54339 Chitin-binding, type 1; D-galactoside/L-rhamnose binding... 0.02 OrthoFinder
Transcript_contig_56669 56669 D-galactoside/L-rhamnose binding SUEL lectin domain;... 0.01 OrthoFinder
lcl|BLLF01000975.1_cds_GFH16287.1_10764 HaLaN_12677, GFH16287 Pectate_lyase_3 domain-containing protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006631 fatty acid metabolic process IEP Enrichment
BP GO:0006633 fatty acid biosynthetic process IEP Enrichment
BP GO:0008610 lipid biosynthetic process IEP Enrichment
BP GO:0016053 organic acid biosynthetic process IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
BP GO:0032787 monocarboxylic acid metabolic process IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0044255 cellular lipid metabolic process IEP Enrichment
BP GO:0044283 small molecule biosynthetic process IEP Enrichment
BP GO:0046394 carboxylic acid biosynthetic process IEP Enrichment
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR024535 Pectate_lyase_SF_prot 94 170
No external refs found!