Heatmap: Cluster_64 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	CCAP211/11P,High light	CCAP211/11P,Low light	CPCC90,BBM,72h,Autotrophy	CPCC90,BBM,97h,Mixotrophy	CPCC90,BBM,98h,Mixotrophy	CPCC90,BBM,120h,Mixotrophy	CPCC90,BBM,144h,Heterotrophy	NJ-7,20C	NJ-7,4C	UTEX259,20C	UTEX259,4C
Transcript_contig_11780 (11780)	1.42	1.07	-2.03	-0.23	0.61	-1.84	0.5	0.57	-	-3.88	-1.53
Transcript_contig_1490 (1490)	0.73	1.08	-1.84	0.01	0.81	-1.3	1.14	0.5	-	-3.81	-3.47
Transcript_contig_18585 (18585)	0.74	1.28	0.58	0.59	0.37	-1.8	-0.13	0.01	-	-2.44	-2.22
Transcript_contig_23031 (23031)	0.99	1.26	1.2	-0.96	-0.54	-2.29	-0.55	1.09	-	-3.35	-
Transcript_contig_2388 (2388)	0.31	0.87	0.16	0.31	-0.04	-1.04	0.95	1.0	-2.98	-	-4.05
Transcript_contig_2517 (2517)	0.61	0.63	0.2	-0.14	-0.17	-0.21	0.73	0.7	-3.15	-1.21	-1.79
Transcript_contig_2672 (2672)	0.65	0.84	0.22	-0.12	-1.93	-0.19	1.12	0.82	-3.13	-2.58	-2.46
Transcript_contig_2683 (2683)	0.64	0.9	0.46	0.3	-0.17	-0.81	0.64	0.92	-5.51	-5.86	-4.7
Transcript_contig_2976 (2976)	1.32	1.18	1.3	-0.1	-0.81	-2.07	0.28	-0.37	-4.53	-	-
Transcript_contig_3188 (3188)	0.14	0.61	0.68	0.19	0.01	-0.19	0.85	0.52	-3.0	-3.13	-1.8
Transcript_contig_3835 (3835)	1.1	0.9	1.12	-1.32	-1.35	-3.37	-0.07	1.43	-	-3.43	-2.46
Transcript_contig_4370 (4370)	0.73	0.65	0.21	-0.65	0.85	-0.65	0.91	0.53	-	-4.78	-2.48
Transcript_contig_4712 (4712)	0.48	0.9	0.31	-0.69	-0.79	0.14	0.42	0.82	-1.55	-1.29	-1.52
Transcript_contig_54888 (54888)	-0.39	0.01	1.43	0.68	-1.07	-0.07	1.1	0.31	-3.9	-5.62	-4.69
Transcript_contig_5529 (5529)	0.46	0.89	-0.36	0.13	0.65	-0.44	0.79	0.74	-	-5.21	-2.67
Transcript_contig_55927 (55927)	0.19	0.6	0.71	0.71	-0.42	-0.6	0.74	0.9	-5.12	-8.21	-3.42
Transcript_contig_55933 (55933)	0.63	0.97	0.52	0.27	-1.56	-0.47	0.62	0.58	-1.99	-2.15	-1.77
Transcript_contig_57064 (57064)	0.31	0.59	-0.1	-0.18	0.48	-0.83	0.7	0.85	-0.08	-7.4	-3.23
Transcript_contig_57387 (57387)	0.68	0.91	0.07	0.34	-0.21	-0.76	0.35	0.64	-3.31	-1.15	-1.44
Transcript_contig_57815 (57815)	0.53	0.73	0.52	0.12	-0.38	-0.49	0.49	0.88	-	-1.71	-1.6
Transcript_contig_58217 (58217)	0.66	0.84	0.63	0.32	-0.4	-0.43	0.63	0.27	-1.26	-	-2.62
Transcript_contig_58398 (58398)	0.57	0.81	0.42	0.03	-0.23	-0.76	0.83	0.59	-2.26	-2.24	-1.96
Transcript_contig_58594 (58594)	0.11	0.11	0.99	0.13	0.38	-0.67	0.98	0.19	-1.76	-2.2	-2.29
Transcript_contig_58704 (58704)	0.5	0.98	-0.16	-0.75	-1.54	0.28	0.58	0.95	-1.95	-0.95	-1.41
Transcript_contig_58795 (58795)	0.33	0.6	0.68	0.12	0.24	-0.7	1.0	0.67	-4.6	-4.7	-3.8
Transcript_contig_59660 (59660)	0.63	0.91	0.37	0.19	-0.6	-0.45	1.08	0.56	-	-	-2.6
Transcript_contig_5991 (5991)	1.04	0.64	1.05	-0.57	-1.18	-2.2	0.24	0.93	-	-1.28	-1.09
Transcript_contig_60706 (60706)	1.16	1.4	-1.34	-1.79	1.07	-1.5	-0.21	1.08	-	-	-
Transcript_contig_61824 (61824)	0.2	0.38	1.04	0.23	-0.19	-0.52	0.99	0.76	-	-	-3.77
Transcript_contig_62287 (62287)	1.66	1.38	1.96	-0.26	-	-2.15	-1.79	-	-	-	-
Transcript_contig_63097 (63097)	1.5	1.1	-0.26	0.45	-0.03	-	-0.18	0.75	-1.82	-	-
Transcript_contig_63126 (63126)	0.91	0.63	-0.64	-0.87	1.25	-1.43	0.77	0.95	-	-	-
Transcript_contig_6396 (6396)	0.61	0.55	0.61	-0.08	0.01	-0.13	0.9	0.76	-	-3.97	-
Transcript_contig_64265 (64265)	1.31	1.27	0.95	-0.11	-1.94	-1.23	0.6	-0.74	-1.31	-	-4.39
Transcript_contig_64400 (64400)	0.67	0.75	1.07	-1.36	-0.29	0.04	0.82	0.71	-	-	-
Transcript_contig_6553 (6553)	0.52	0.85	0.87	0.13	-0.49	-1.09	0.78	0.58	-2.25	-2.35	-4.11
Transcript_contig_65757 (65757)	0.64	0.38	0.76	-0.43	0.45	-0.93	0.88	0.39	-	-2.33	-1.15
Transcript_contig_66350 (66350)	0.41	1.09	0.62	-0.32	-1.31	-1.99	0.87	1.43	-	-	-5.54
Transcript_contig_669 (669)	0.66	0.89	-1.85	0.09	0.11	-1.1	0.95	1.4	-	-3.69	-4.73
Transcript_contig_68062 (68062)	0.25	0.73	0.74	0.28	-0.15	-0.24	0.97	0.45	-	-	-2.38
Transcript_contig_68283 (68283)	0.41	0.89	-0.69	0.72	0.44	-1.31	0.38	0.78	-0.93	-3.53	-2.62
Transcript_contig_69062 (69062)	0.44	0.69	0.68	0.03	-0.97	-0.34	1.07	0.81	-4.47	-3.59	-3.02
Transcript_contig_69083 (69083)	0.47	0.83	0.27	-0.73	-0.99	0.02	0.58	0.8	-0.83	-1.63	-1.36
Transcript_contig_69246 (69246)	0.42	0.63	0.73	0.51	0.23	-0.88	0.73	0.44	-	-2.15	-3.86
Transcript_contig_69368 (69368)	0.51	0.7	0.29	0.73	0.48	-1.5	0.99	0.3	-	-	-3.15
Transcript_contig_70135 (70135)	1.24	0.48	1.29	-0.94	-0.94	-0.41	1.22	-0.58	-	-	-
Transcript_contig_70271 (70271)	0.63	0.49	0.15	0.36	-0.83	-0.11	0.73	1.0	-3.17	-2.9	-1.89
Transcript_contig_71551 (71551)	0.68	0.77	-0.25	0.01	0.46	-1.58	0.76	0.85	-	-1.57	-1.72
Transcript_contig_71728 (71728)	0.51	0.46	1.03	-0.31	0.67	0.08	1.13	-1.66	-	-3.51	-3.3
Transcript_contig_72532 (72532)	-0.37	0.27	0.91	-0.27	0.13	-0.25	1.01	0.28	-0.79	-1.97	-1.69
Transcript_contig_73245 (73245)	0.55	1.34	-0.26	0.42	0.84	-3.06	0.74	0.33	-	-	-
Transcript_contig_78036 (78036)	0.59	0.74	0.46	0.01	-0.17	-0.64	0.9	0.97	-	-	-3.32
Transcript_contig_781 (781)	0.3	0.25	1.11	-0.68	0.07	-0.24	1.22	0.64	-	-	-
Transcript_contig_78481 (78481)	0.62	0.81	0.04	-0.28	-0.75	-0.3	1.01	0.51	-2.49	-1.13	-1.49
Transcript_contig_78673 (78673)	0.57	0.69	-0.3	0.33	-1.12	-0.47	0.76	0.61	-0.61	-1.43	-1.3
Transcript_contig_78797 (78797)	0.55	0.69	-0.38	-0.08	0.29	-0.08	0.92	0.66	-1.33	-4.15	-3.11
Transcript_contig_79144 (79144)	0.58	0.72	0.45	0.07	-0.91	-0.32	0.75	-0.05	-2.13	-0.45	-0.96
Transcript_contig_79156 (79156)	0.64	0.98	0.75	0.3	-0.25	-0.8	0.58	0.55	-5.5	-3.69	-3.72
Transcript_contig_79225 (79225)	0.35	0.77	0.78	0.34	0.25	-0.4	0.91	-0.0	-2.97	-	-3.85
Transcript_contig_79233 (79233)	0.62	0.84	0.28	0.3	-0.39	-0.52	0.74	0.95	-	-	-2.65
Transcript_contig_79317 (79317)	0.27	0.71	1.07	0.17	-1.18	-0.24	0.82	0.77	-3.19	-5.54	-4.84
Transcript_contig_79510 (79510)	0.83	0.9	0.47	0.38	0.04	-0.34	0.71	-0.17	-1.97	-	-3.62
Transcript_contig_79673 (79673)	0.55	0.67	0.44	0.45	-0.18	-0.33	0.85	0.05	-3.0	-2.21	-1.47
Transcript_contig_80008 (80008)	0.59	0.9	0.37	-0.03	-0.31	-0.61	0.57	1.13	-	-	-2.25
Transcript_contig_80133 (80133)	0.23	0.69	0.49	0.13	-0.42	-0.14	0.78	1.0	-	-	-1.54
Transcript_contig_80509 (80509)	0.88	1.07	1.14	-0.56	-0.4	-0.26	0.62	0.08	-	-	-
Transcript_contig_80957 (80957)	0.66	0.51	-0.15	-0.2	0.38	-0.58	0.27	1.22	-	-1.0	-2.25
Transcript_contig_81979 (81979)	0.95	0.93	0.35	-0.04	-0.74	-0.55	0.88	0.0	-3.47	-1.2	-1.89
Transcript_contig_81992 (81992)	0.55	0.75	0.34	0.25	-0.51	-0.5	0.65	0.64	-2.11	-1.66	-1.63
Transcript_contig_82352 (82352)	0.47	1.24	-0.04	0.89	0.45	-0.92	-0.04	0.47	-	-	-2.44
Transcript_contig_824 (824)	0.61	0.77	0.78	0.14	-1.1	-0.24	0.75	0.87	-7.48	-	-3.09
Transcript_contig_82803 (82803)	0.42	0.76	0.49	-0.91	-0.77	-0.3	0.63	0.77	-0.86	-1.23	-1.33
Transcript_contig_83433 (83433)	0.36	0.74	0.8	0.1	-0.67	-0.43	0.83	0.84	-5.32	-4.03	-2.3
Transcript_contig_84255 (84255)	0.55	0.79	0.69	0.27	-0.72	-0.77	0.75	1.02	-	-6.36	-4.05
Transcript_contig_8869 (8869)	0.2	0.21	1.29	0.33	0.75	-0.71	0.9	-0.47	-	-4.91	-3.7
Transcript_contig_89152 (89152)	0.31	0.56	0.52	0.37	-0.18	-0.08	0.85	0.05	-2.44	-1.95	-1.19
Transcript_contig_89164 (89164)	0.51	0.63	0.38	0.01	0.38	-0.66	0.8	0.45	-2.07	-2.15	-2.23
Transcript_contig_89716 (89716)	0.48	0.72	0.16	0.42	0.05	-0.83	0.18	0.43	-0.73	-1.13	-1.47
Transcript_contig_89961 (89961)	0.28	0.63	0.99	-0.04	-0.11	-0.21	0.79	0.54	-4.4	-2.75	-3.15
Transcript_contig_9103 (9103)	0.88	0.74	0.93	-0.02	-3.26	0.02	0.91	0.33	-4.19	-2.55	-3.02
Transcript_contig_91468 (91468)	0.76	0.57	0.81	0.08	-1.5	0.6	1.25	-0.81	-	-	-2.45
Transcript_contig_9208 (9208)	0.39	0.63	1.03	-0.64	-0.17	-0.21	0.49	0.83	-	-2.12	-1.75
Transcript_contig_9763 (9763)	1.07	0.88	0.86	0.31	-0.12	-2.25	0.38	0.55	-	-	-3.1

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.