Heatmap: Cluster_6 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	CCAP211/11P,High light	CCAP211/11P,Low light	CPCC90,BBM,72h,Autotrophy	CPCC90,BBM,97h,Mixotrophy	CPCC90,BBM,98h,Mixotrophy	CPCC90,BBM,120h,Mixotrophy	CPCC90,BBM,144h,Heterotrophy	NJ-7,20C	NJ-7,4C	UTEX259,20C	UTEX259,4C
Transcript_contig_10002 (10002)	0.15	0.89	-0.1	-0.05	-0.08	-0.33	-0.2	0.59	-0.4	-0.94	-0.42
Transcript_contig_10108 (10108)	0.7	-1.41	0.94	1.45	0.17	-	-	-	-	1.68	-
Transcript_contig_10451 (10451)	-1.07	-	0.86	0.76	0.63	1.03	0.16	-	-	-0.81	0.79
Transcript_contig_10560 (10560)	-	-	1.27	0.46	-	1.48	1.62	-	-	0.42	-
Transcript_contig_10951 (10951)	0.99	1.27	-	-	0.82	-	-0.06	1.6	-	-0.25	-
Transcript_contig_11462 (11462)	-1.04	-	-	-	0.19	0.69	-0.79	-	-	-2.23	2.8
Transcript_contig_11536 (11536)	-0.23	-1.46	1.29	-1.52	-0.8	-1.09	0.86	-	-0.59	-	1.79
Transcript_contig_11567 (11567)	-	-	0.56	0.43	0.79	0.5	-0.2	-	-	-0.29	1.74
Transcript_contig_1189 (1189)	-0.8	-0.17	-	-1.09	-0.37	2.1	-	-	-	1.14	0.84
Transcript_contig_12315 (12315)	1.16	-1.75	-	-	-	0.39	-1.05	-	-	1.75	1.72
Transcript_contig_12792 (12792)	0.62	1.62	-0.69	-	-	-	-0.13	1.32	-	0.43	0.01
Transcript_contig_13085 (13085)	0.29	1.64	-	-	-	-0.06	2.51	-	-	-	-
Transcript_contig_13383 (13383)	-1.03	0.99	-	-	-0.49	-0.0	-2.37	0.88	0.31	0.98	0.64
Transcript_contig_13617 (13617)	0.93	1.14	-2.54	-0.75	0.18	-1.11	-2.08	1.05	-	0.34	-0.08
Transcript_contig_14312 (14312)	-0.36	0.1	0.14	-0.92	-1.96	0.35	-2.95	-	0.58	1.22	1.03
Transcript_contig_14765 (14765)	-	-	0.08	-	0.3	0.87	1.99	-	-	0.82	0.2
Transcript_contig_15398 (15398)	-	-	2.79	-	-	-	-	-	-	-	2.03
Transcript_contig_15417 (15417)	-0.42	-1.23	0.2	0.72	1.16	-1.59	-	-	-	0.35	1.67
Transcript_contig_16114 (16114)	-2.12	-0.58	1.12	0.22	-	-0.84	0.34	1.36	-	-1.85	1.06
Transcript_contig_1624 (1624)	0.27	-0.18	0.65	0.33	-1.62	-0.54	-0.07	0.06	-1.51	0.6	0.29
Transcript_contig_16438 (16438)	-1.77	-	-	2.11	-	0.17	-0.64	-	0.45	1.44	-0.87
Transcript_contig_17010 (17010)	-0.64	-	-0.45	0.27	-0.56	-0.21	1.68	-	1.08	-0.1	-0.65
Transcript_contig_17490 (17490)	1.0	2.1	-	2.24	-	-	-	-	-	-	-
Transcript_contig_18038 (18038)	-	-	-	-	-	-	3.46	-	-	-	-
Transcript_contig_18197 (18197)	-	-	-	2.06	2.77	-	-	-	-	-	-
Transcript_contig_19086 (19086)	-	-	-	-	-	-	3.11	-	-	-	1.24
Transcript_contig_19875 (19875)	-0.37	-	0.83	-	-	2.04	1.24	-	-	0.98	-
Transcript_contig_22988 (22988)	-	-	3.3	-	-	-	0.22	-	-	-	-
Transcript_contig_2375 (2375)	-1.74	-	2.36	1.14	-	-0.75	0.28	-	-	-0.93	0.06
Transcript_contig_23909 (23909)	-0.36	-	-	0.61	-	1.53	1.15	-	1.54	-	-0.54
Transcript_contig_23996 (23996)	-	-	-	-	-	1.63	-	-	-	1.68	2.23
Transcript_contig_2570 (2570)	-1.57	-1.67	0.56	0.94	0.58	0.31	1.09	-1.75	-	-0.8	0.27
Transcript_contig_26040 (26040)	-	2.56	-	-	-	-	-	-	-	-	2.35
Transcript_contig_2742 (2742)	0.1	0.58	1.3	-	-	1.1	1.65	-	-	-0.54	-
Transcript_contig_3202 (3202)	-0.02	0.36	0.3	0.69	0.53	-0.37	0.55	-0.77	-3.34	0.04	-1.03
Transcript_contig_3292 (3292)	-	-	-	-	2.97	-	-	-	-	-	1.65
Transcript_contig_3362 (3362)	-	-	-	-0.12	0.6	-	1.64	1.38	-	1.1	-0.51
Transcript_contig_33627 (33627)	-	-	-	-	-	-	-	-	-	-	3.46
Transcript_contig_3365 (3365)	0.48	-1.43	0.58	0.38	-	-	0.91	2.0	-	-1.85	-1.89
Transcript_contig_3424 (3424)	-0.07	-0.01	0.62	0.14	1.22	-1.39	0.39	-0.46	-1.8	-0.81	-0.29
Transcript_contig_3448 (3448)	-	-	2.26	1.78	-	1.47	-	-	-	-	-
Transcript_contig_35670 (35670)	0.7	1.07	-4.75	-2.33	-	-0.8	-2.36	0.44	1.74	-0.02	-0.76
Transcript_contig_3675 (3675)	-	-	-	-	-	-	-	-	-	3.05	1.43
Transcript_contig_3948 (3948)	-0.86	-	1.6	-2.21	-0.17	1.1	1.24	-	-	0.05	-0.38
Transcript_contig_3999 (3999)	0.74	1.91	-1.09	0.75	-0.86	-1.88	0.43	-	-	0.0	-1.97
Transcript_contig_4023 (4023)	-	-	-	-	-	-	-	-	-	3.46	-
Transcript_contig_41123 (41123)	-	-	-	-	-	-	-	-	-	-	-
Transcript_contig_43251 (43251)	0.48	-	3.26	-	-	-	-	-	-	-	-
Transcript_contig_4355 (4355)	0.48	0.16	-1.31	-0.33	-0.43	0.03	1.26	-2.3	-5.46	1.13	-0.49
Transcript_contig_4995 (4995)	-	-	1.3	-	-	1.81	-	-	2.33	-	-
Transcript_contig_5043 (5043)	-4.14	-	0.52	1.46	2.22	-0.51	0.19	-	-	-	-2.06
Transcript_contig_5102 (5102)	0.8	0.64	-2.07	-0.51	-1.29	-0.32	0.82	-0.52	-0.49	0.68	-0.34
Transcript_contig_54485 (54485)	0.12	0.19	-2.39	0.92	0.98	0.06	0.71	-0.42	-4.27	-0.47	-0.93
Transcript_contig_5539 (5539)	-	-	-	-	-	1.89	0.19	-	2.39	-	-0.14
Transcript_contig_55597 (55597)	0.1	0.1	-0.42	0.08	-0.46	-0.88	-0.36	-0.41	1.31	0.31	-0.92
Transcript_contig_55711 (55711)	0.04	-0.02	0.35	0.5	-0.11	-0.96	-0.1	-0.13	0.52	-0.16	-0.56
Transcript_contig_56439 (56439)	0.32	0.56	-0.06	0.24	-0.33	-1.21	-0.38	0.62	0.1	-0.14	-0.69
Transcript_contig_5740 (5740)	1.94	-	-	-	-	-	-	-	-	-	2.84
Transcript_contig_57600 (57600)	0.01	0.53	0.93	0.61	-	-1.3	1.2	-0.06	-	-0.33	-0.62
Transcript_contig_57818 (57818)	-1.68	-4.98	-0.04	1.36	0.87	0.3	1.41	-2.62	-1.19	-1.66	-1.02
Transcript_contig_58624 (58624)	1.27	0.5	-2.4	-5.53	-	0.09	-1.77	-0.25	-1.96	1.09	1.25
Transcript_contig_5888 (5888)	-0.85	-	0.93	-1.07	-	0.5	1.6	-	-1.63	-0.2	1.27
Transcript_contig_59652 (59652)	-0.13	-0.49	1.59	-0.86	-0.99	0.31	1.59	-0.79	-	-3.78	-1.26
Transcript_contig_59739 (59739)	-0.67	-	0.95	0.52	-0.09	-0.58	1.03	-	-1.62	0.43	0.77
Transcript_contig_5978 (5978)	-1.76	-2.65	-0.33	-1.37	-0.69	0.42	-1.27	-	-2.21	2.12	1.29
Transcript_contig_60053 (60053)	0.41	0.64	-0.63	-0.88	-2.51	-0.14	0.18	1.43	-0.28	-1.25	-0.38
Transcript_contig_60205 (60205)	0.49	0.61	-0.7	-1.13	-0.29	-0.6	-0.25	-0.46	-0.35	0.52	0.79
Transcript_contig_60220 (60220)	0.51	0.45	-	-	-	1.11	0.59	2.18	-	-	-
Transcript_contig_60343 (60343)	0.59	-0.89	-1.03	-0.9	-1.8	0.5	2.25	-0.02	-	-	-1.08
Transcript_contig_60524 (60524)	-1.01	-1.28	0.23	1.28	0.74	-0.65	1.09	-2.57	-0.82	-0.13	-1.31
Transcript_contig_61338 (61338)	0.17	-0.29	-0.2	0.45	0.52	-0.02	0.48	-0.51	-0.42	-0.19	-0.57
Transcript_contig_61640 (61640)	0.15	-2.29	0.29	1.25	1.0	-0.0	0.69	-	-1.85	-0.01	-2.27
Transcript_contig_61645 (61645)	-1.82	-	-	-0.85	1.4	-	-0.69	0.97	1.98	-0.01	-
Transcript_contig_61689 (61689)	-	-	-	2.12	-	-	1.28	-	-	1.09	1.06
Transcript_contig_61692 (61692)	-	-	-	1.18	-	-	1.23	2.68	-	-	-
Transcript_contig_62080 (62080)	0.29	-0.25	0.66	-0.14	-2.09	-0.07	1.31	-	-0.83	0.12	0.19
Transcript_contig_6226 (6226)	0.15	1.03	-1.74	-1.24	-3.09	-1.87	-0.08	1.39	-	0.53	0.78
Transcript_contig_62300 (62300)	0.22	-0.06	0.67	0.06	-0.38	-0.44	0.46	-0.87	0.34	0.09	-1.04
Transcript_contig_62549 (62549)	1.35	2.09	-	-	-	-	-0.22	1.44	-	-	-0.67
Transcript_contig_62656 (62656)	1.24	2.42	-	-	-	-	-	-	-	0.54	0.88
Transcript_contig_62718 (62718)	0.12	-0.45	1.93	-0.87	-0.01	0.4	0.88	-0.96	-	-2.81	-
Transcript_contig_63135 (63135)	-	-	-	-	-	3.46	-	-	-	-	-
Transcript_contig_63368 (63368)	-	-	-	-	-	-	1.53	-	-	3.02	-
Transcript_contig_63576 (63576)	-0.83	-0.17	2.34	-0.38	-	-	-1.45	-	1.02	-1.04	-0.27
Transcript_contig_63727 (63727)	0.29	0.03	1.45	0.71	-0.49	-2.51	-0.82	-0.71	-	0.24	0.19
Transcript_contig_63918 (63918)	0.47	0.4	0.09	0.77	-	0.38	0.27	-1.48	-0.05	-0.03	-0.48
Transcript_contig_64977 (64977)	1.28	1.78	-	-	1.53	-	-0.57	-	-	0.11	-1.01
Transcript_contig_6510 (6510)	0.74	0.32	-1.5	0.03	-1.27	0.68	0.49	-	-	0.98	0.39
Transcript_contig_65363 (65363)	-	-	-	-	-	-	-	-	-	-	-
Transcript_contig_66259 (66259)	-	-	-	-	-	-	-	-	-	3.46	-
Transcript_contig_66452 (66452)	-	-	3.46	-	-	-	-	-	-	-	-
Transcript_contig_66501 (66501)	-	-	-	-	-	-	-	-	-	-	-
Transcript_contig_66889 (66889)	1.83	1.79	-	-3.37	-	-2.39	-2.2	1.63	-	-1.39	-
Transcript_contig_67673 (67673)	-	1.69	-	-	-	1.69	-	-	-	1.42	0.9
Transcript_contig_67780 (67780)	0.2	-0.33	0.02	1.63	0.73	-0.32	0.69	-	-	-1.14	-1.2
Transcript_contig_67888 (67888)	0.82	2.06	-	-	1.71	-	0.83	-	-	-	-
Transcript_contig_67946 (67946)	-0.35	0.92	0.14	-0.4	-0.16	-0.29	0.18	1.17	-2.35	-0.43	-1.26
Transcript_contig_67988 (67988)	0.51	0.63	-2.51	-0.09	0.22	0.37	-0.09	0.55	-0.48	-0.08	-1.37
Transcript_contig_68013 (68013)	-0.02	-0.67	-0.58	-1.01	0.37	0.95	1.62	-	-	0.2	-0.36
Transcript_contig_68058 (68058)	0.04	0.33	-2.88	0.42	0.01	-0.26	0.87	1.46	-2.44	-2.72	-1.08
Transcript_contig_68147 (68147)	-	-	-	-	2.38	-	0.39	2.16	-	-	-
Transcript_contig_68156 (68156)	-	-	-	-	-	-	-	-	-	-	-
Transcript_contig_68172 (68172)	-0.57	1.89	-	-1.4	-	-1.4	-	1.4	0.83	-1.44	0.1
Transcript_contig_68323 (68323)	0.59	0.48	-0.29	-0.59	-0.42	-	-0.82	1.98	-0.42	-	-0.73
Transcript_contig_68399 (68399)	-	-	-	1.8	-	-0.19	0.27	-	-	2.19	-0.18
Transcript_contig_68481 (68481)	-0.13	-	0.07	0.58	0.3	0.76	1.67	-	0.51	-	-
Transcript_contig_68551 (68551)	-0.11	-2.54	-1.2	-1.32	0.03	1.39	-0.04	-	-	1.53	0.64
Transcript_contig_68672 (68672)	-0.0	0.61	0.31	-0.16	-	-0.74	1.38	0.32	-	-0.38	0.16
Transcript_contig_69593 (69593)	-0.4	-0.95	-0.95	1.45	0.28	-1.84	0.81	-	-	0.2	1.05
Transcript_contig_71235 (71235)	-	-	-	-	-	-	-	-	-	3.46	-
Transcript_contig_71425 (71425)	0.41	-	1.61	-	-	2.31	-	-	-	-	0.73
Transcript_contig_7161 (7161)	-1.68	-	-0.57	-2.05	0.77	-0.12	-0.05	-	0.46	1.62	0.79
Transcript_contig_71763 (71763)	-0.54	0.38	-2.32	-0.18	-0.87	0.26	0.86	-1.3	-	1.3	0.59
Transcript_contig_71779 (71779)	0.82	-	-	-	-	0.59	-	-	-	2.37	1.34
Transcript_contig_71871 (71871)	0.94	1.22	-	0.02	-	0.73	-2.46	-0.8	-0.37	0.67	-0.06
Transcript_contig_7252 (7252)	-0.15	-	-2.33	0.95	0.71	-3.12	0.22	-	-	1.58	1.05
Transcript_contig_73151 (73151)	-1.09	-0.61	0.7	0.38	-2.24	1.29	1.11	-	-0.03	-1.85	-0.2
Transcript_contig_7453 (7453)	-	-	-	-	-	-	-	-	-	3.46	-
Transcript_contig_7688 (7688)	-1.29	-	0.56	0.33	0.74	0.74	1.2	-	-	0.44	-0.2
Transcript_contig_7801 (7801)	0.8	1.22	-	0.28	-	-1.28	-1.25	0.52	0.95	0.25	-1.59
Transcript_contig_7849 (7849)	0.52	-1.46	-0.73	-	-0.5	-0.04	-	-	1.29	0.67	1.52
Transcript_contig_79470 (79470)	-	-	-	1.32	-	2.24	1.91	-	-	-	-
Transcript_contig_79498 (79498)	0.58	0.73	0.64	0.41	-1.89	-0.88	0.72	-0.13	-3.95	-0.5	-0.3
Transcript_contig_79711 (79711)	-0.81	0.07	-0.49	-0.98	-0.26	-1.28	-0.55	0.52	-0.05	0.4	1.33
Transcript_contig_8003 (8003)	-1.12	-3.01	0.42	0.66	0.7	-0.26	0.84	-	-	0.97	0.37
Transcript_contig_80397 (80397)	-0.87	-0.45	0.13	-0.48	-0.12	0.17	-0.35	0.14	1.27	-2.3	0.45
Transcript_contig_80499 (80499)	-0.52	-0.06	0.26	0.92	0.68	-0.06	1.36	0.05	-	-4.4	-4.43
Transcript_contig_80652 (80652)	0.11	1.17	-	-1.79	-	0.13	-	1.62	-	0.76	0.6
Transcript_contig_81064 (81064)	0.11	0.88	1.66	-0.41	-	-	0.54	1.09	-	-0.77	-
Transcript_contig_81171 (81171)	0.57	0.31	-0.28	0.34	-0.39	-0.93	-1.22	-0.23	-1.19	0.88	0.42
Transcript_contig_816 (816)	-	1.9	-	-	-	-	2.86	-	-	-	-
Transcript_contig_81609 (81609)	-0.19	-	0.09	-3.21	-0.76	1.02	1.51	-	0.52	-0.65	0.5
Transcript_contig_81766 (81766)	0.71	2.44	-	-	-	-	-	1.8	-	-1.06	-
Transcript_contig_82263 (82263)	-	-	2.82	-	-	-	-	-	-	1.97	-
Transcript_contig_82308 (82308)	2.46	2.46	-	-	-	-	-	-	-	-	-
Transcript_contig_82450 (82450)	0.89	1.12	-0.55	-0.14	-0.29	-0.73	0.49	0.95	-4.5	-1.56	-2.07
Transcript_contig_83146 (83146)	-0.91	0.88	0.13	-1.94	-1.23	1.23	-1.04	-	-	1.5	0.25
Transcript_contig_83477 (83477)	0.48	-0.71	-0.23	0.44	0.62	-1.16	1.08	-2.22	-1.79	0.35	-0.16
Transcript_contig_83562 (83562)	0.86	1.67	-	0.69	1.74	-	0.08	-	-	-	-
Transcript_contig_83573 (83573)	-	-	-1.16	-2.23	-0.78	1.42	1.87	-	-	-	1.78
Transcript_contig_8424 (8424)	-0.21	1.32	-	-	-	1.83	0.7	-	-	1.3	-
Transcript_contig_84645 (84645)	-0.83	-	-0.92	0.59	-	0.24	0.01	1.09	-	1.56	0.2
Transcript_contig_8998 (8998)	-	-	-	-	-	-	3.46	-	-	-	-
Transcript_contig_9002 (9002)	1.25	0.51	-0.16	-1.04	-1.52	-1.8	0.08	1.27	-1.31	-0.72	-0.52
Transcript_contig_90037 (90037)	-1.05	-0.72	0.28	0.39	-0.75	-1.49	-0.15	-0.37	2.08	-1.46	-2.65
Transcript_contig_90076 (90076)	-	-	1.51	0.94	0.57	0.61	1.3	-	-	-1.5	-1.29
Transcript_contig_90447 (90447)	-	-0.22	-	0.02	-	-0.29	-0.15	1.52	-	1.96	-0.59
Transcript_contig_90985 (90985)	-	-	-	-	-	2.86	-	-	-	1.91	-
Transcript_contig_9297 (9297)	1.5	1.89	-	-1.32	-	-1.9	-0.43	0.76	-0.4	-1.1	-2.93
Transcript_contig_9861 (9861)	-	-	-	-	2.02	1.31	-	-	-	1.94	-0.67
Transcript_contig_9986 (9986)	-0.89	0.16	0.89	0.08	-	-	1.75	-	-	-	1.62

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.