Heatmap: Cluster_161 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

Gene	CCAP211/11P,High light	CCAP211/11P,Low light	CPCC90,BBM,72h,Autotrophy	CPCC90,BBM,97h,Mixotrophy	CPCC90,BBM,98h,Mixotrophy	CPCC90,BBM,120h,Mixotrophy	CPCC90,BBM,144h,Heterotrophy	NJ-7,20C	NJ-7,4C	UTEX259,20C	UTEX259,4C
Transcript_contig_12782 (12782)	0.32	0.0	5.77	8.64	15.88	2.55	7.91	0.0	0.0	0.0	0.6
Transcript_contig_1279 (1279)	11.06	0.0	27.43	62.31	69.52	51.74	59.53	0.0	34.56	18.57	9.57
Transcript_contig_13829 (13829)	6.83	3.38	15.86	40.62	54.42	10.55	20.95	0.0	0.0	3.95	7.08
Transcript_contig_17005 (17005)	1.74	0.46	0.62	6.27	16.25	3.21	2.66	1.25	0.0	3.11	0.0
Transcript_contig_18226 (18226)	0.81	0.0	4.36	7.99	12.34	0.72	2.02	0.0	0.0	0.0	0.0
Transcript_contig_19589 (19589)	17.59	3.56	49.03	104.72	187.06	23.2	58.63	0.0	0.0	3.27	8.65
Transcript_contig_218 (218)	14.51	11.22	24.86	27.79	70.08	8.91	27.52	10.37	4.07	5.55	4.11
Transcript_contig_24095 (24095)	3.39	0.0	6.32	11.86	13.91	6.24	7.46	0.0	0.0	0.76	1.37
Transcript_contig_2707 (2707)	18.39	3.52	43.1	61.9	99.85	18.29	46.07	5.87	0.0	13.67	15.58
Transcript_contig_4294 (4294)	4.8	4.69	6.95	11.48	25.7	6.21	10.71	5.84	1.96	4.07	1.62
Transcript_contig_4814 (4814)	1.55	0.8	6.16	13.27	21.82	4.91	7.13	0.12	0.08	3.91	3.01
Transcript_contig_54284 (54284)	18.71	14.15	48.36	68.75	98.18	27.25	44.0	12.55	14.47	22.98	19.21
Transcript_contig_57118 (57118)	0.63	0.65	11.57	10.13	15.19	3.06	2.72	0.4	0.27	0.0	1.59
Transcript_contig_57449 (57449)	13.94	11.86	11.76	44.95	75.04	10.54	24.98	7.56	6.91	10.67	6.53
Transcript_contig_58724 (58724)	28.12	22.06	54.81	107.48	130.67	36.83	65.66	22.88	8.28	24.54	17.55
Transcript_contig_592 (592)	0.55	0.17	1.73	9.21	24.45	1.58	3.56	0.87	0.0	0.0	0.28
Transcript_contig_59892 (59892)	15.65	6.2	29.99	41.27	91.44	14.87	39.87	5.25	0.0	19.14	10.7
Transcript_contig_59899 (59899)	6.92	4.08	23.31	23.48	30.44	10.02	16.37	3.69	3.72	0.51	5.01
Transcript_contig_60420 (60420)	6.59	0.56	15.11	37.05	117.78	11.88	39.33	1.07	0.24	0.0	1.49
Transcript_contig_60562 (60562)	13.05	9.61	33.19	37.87	67.29	14.08	32.7	8.56	0.35	9.44	8.11
Transcript_contig_60655 (60655)	8.77	8.62	23.38	32.58	45.26	9.26	16.21	13.37	8.52	13.59	8.69
Transcript_contig_61600 (61600)	18.08	16.45	26.21	44.25	52.48	30.6	30.73	19.67	15.32	16.86	13.39
Transcript_contig_62202 (62202)	33.74	2.07	241.17	297.88	610.63	77.55	200.02	0.0	2.39	0.45	9.62
Transcript_contig_6250 (6250)	1.85	0.26	3.91	7.32	12.31	1.85	4.96	0.72	0.0	0.39	1.19
Transcript_contig_62614 (62614)	0.09	0.0	1.95	3.36	5.67	2.04	2.86	0.0	0.0	0.06	0.23
Transcript_contig_63415 (63415)	28.78	23.09	51.88	77.81	107.14	41.61	83.05	13.46	0.7	26.58	17.13
Transcript_contig_66152 (66152)	2.16	2.27	11.99	16.81	31.73	6.71	8.97	0.52	0.35	4.07	2.26
Transcript_contig_67695 (67695)	0.88	0.86	2.01	1.6	5.55	0.0	1.3	0.0	0.0	0.1	0.5
Transcript_contig_68091 (68091)	25.68	0.0	79.73	122.52	260.13	117.81	151.72	0.0	69.09	5.95	4.52
Transcript_contig_68412 (68412)	24.36	22.78	59.8	107.76	186.95	45.86	74.87	27.21	67.56	22.38	24.36
Transcript_contig_68640 (68640)	10.43	0.0	10.31	114.34	193.84	38.35	65.88	0.0	0.0	0.0	8.85
Transcript_contig_68973 (68973)	11.96	0.0	32.81	66.67	122.74	30.18	57.29	0.0	2.44	54.24	43.62
Transcript_contig_68992 (68992)	51.48	0.0	161.55	214.31	612.47	99.63	211.72	0.0	0.0	148.78	69.36
Transcript_contig_70443 (70443)	2.06	0.0	11.46	10.47	18.07	4.68	12.29	0.0	0.0	0.0	1.44
Transcript_contig_78137 (78137)	8.87	2.37	40.41	70.98	132.45	32.21	62.49	1.71	4.08	10.88	14.74
Transcript_contig_78172 (78172)	17.68	21.02	82.51	100.73	149.99	32.76	63.3	32.76	2.05	36.81	34.25
Transcript_contig_78706 (78706)	4.63	0.72	9.09	20.81	35.4	6.32	18.18	1.48	0.0	1.64	1.58
Transcript_contig_78734 (78734)	3.09	1.86	12.68	15.52	21.54	6.48	11.85	1.16	1.92	4.01	2.7
Transcript_contig_79172 (79172)	264.08	325.19	582.92	1071.64	1447.12	448.38	530.45	448.68	28.51	126.67	362.3
Transcript_contig_79371 (79371)	30.62	0.0	246.41	308.3	619.4	142.88	183.04	0.0	0.0	0.0	48.74
Transcript_contig_79570 (79570)	25.7	21.53	49.37	71.07	116.24	15.95	42.86	9.24	2.56	10.77	13.78
Transcript_contig_79637 (79637)	2.74	0.07	24.26	34.62	42.59	12.32	15.65	0.18	4.77	13.66	7.03
Transcript_contig_79663 (79663)	1.52	0.81	1.49	1.76	5.66	1.11	1.78	0.25	0.0	0.07	0.0
Transcript_contig_79827 (79827)	14.45	0.0	127.69	140.59	210.39	90.35	134.13	0.0	15.05	0.0	8.35
Transcript_contig_79994 (79994)	124.07	0.0	497.53	624.66	1178.74	212.51	560.86	0.0	0.0	131.79	91.96
Transcript_contig_80292 (80292)	0.58	0.0	0.0	1.94	8.3	0.77	2.97	0.0	0.0	0.0	0.0
Transcript_contig_80324 (80324)	28.97	21.56	128.07	188.41	248.12	53.27	118.7	28.83	4.85	23.91	25.17
Transcript_contig_80418 (80418)	25.13	0.0	79.27	95.86	158.99	34.54	100.98	0.0	12.4	11.9	17.07
Transcript_contig_80422 (80422)	5.51	2.26	18.06	26.83	55.32	12.16	15.36	4.7	1.58	5.42	5.66
Transcript_contig_80470 (80470)	50.86	0.0	554.32	607.89	1061.36	233.45	674.4	0.0	0.0	57.18	41.12
Transcript_contig_80481 (80481)	9.53	0.0	53.93	69.71	101.04	24.37	54.38	0.0	0.0	0.37	1.09
Transcript_contig_80736 (80736)	26.86	0.0	163.8	302.07	335.8	105.31	225.15	0.0	0.0	139.73	94.91
Transcript_contig_81108 (81108)	11.46	7.41	55.83	83.68	139.14	31.58	46.76	7.85	13.49	28.72	22.59
Transcript_contig_82864 (82864)	1.72	0.0	15.39	22.85	44.66	3.31	8.09	0.0	0.0	0.96	1.02
Transcript_contig_89700 (89700)	13.12	13.42	36.63	48.69	73.87	27.14	38.13	17.0	6.57	11.0	8.9
Transcript_contig_90292 (90292)	9.54	2.48	39.06	56.07	93.98	14.17	32.44	1.04	9.75	4.65	7.59
Transcript_contig_90583 (90583)	8.9	1.15	52.41	79.64	142.35	42.31	75.44	1.04	0.0	0.0	13.24
Transcript_contig_9336 (9336)	29.5	39.32	48.2	86.52	181.27	34.13	75.3	26.05	7.97	19.21	19.68

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)