Heatmap: Cluster_104 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	CCAP211/11P,High light	CCAP211/11P,Low light	CPCC90,BBM,72h,Autotrophy	CPCC90,BBM,97h,Mixotrophy	CPCC90,BBM,98h,Mixotrophy	CPCC90,BBM,120h,Mixotrophy	CPCC90,BBM,144h,Heterotrophy	NJ-7,20C	NJ-7,4C	UTEX259,20C	UTEX259,4C
Transcript_contig_10105 (10105)	0.92	-0.64	0.85	-0.37	-1.24	0.06	1.17	1.12	-	-	-
Transcript_contig_10770 (10770)	-0.07	0.81	-0.11	2.07	-	-2.0	0.16	-	0.33	-2.08	-1.74
Transcript_contig_11737 (11737)	0.19	-0.63	-0.06	1.28	-0.83	0.47	1.54	-0.05	-	-	-
Transcript_contig_11828 (11828)	0.54	0.88	-0.27	0.27	-1.62	0.08	1.04	1.16	-	-	-
Transcript_contig_12285 (12285)	0.09	-0.32	0.71	0.63	0.28	-0.53	1.74	-1.22	-3.38	-2.41	-
Transcript_contig_12346 (12346)	0.45	0.2	-	1.47	-	0.89	1.84	-	-	-	-1.75
Transcript_contig_1319 (1319)	0.95	0.79	-1.51	1.0	-	-2.3	1.17	0.5	-	-0.85	-0.8
Transcript_contig_13625 (13625)	0.62	0.76	-	-0.34	0.53	-0.49	0.2	1.31	-	-	0.25
Transcript_contig_14895 (14895)	-0.19	-0.23	0.18	0.13	1.08	-1.35	1.87	-1.13	-	-	-1.19
Transcript_contig_15632 (15632)	1.54	1.12	-	1.02	-	-	0.07	1.51	-	-	-
Transcript_contig_15951 (15951)	0.25	-	1.38	1.29	0.19	-	1.86	-	-	-	-
Transcript_contig_17122 (17122)	0.24	0.71	-1.39	-0.98	0.75	-0.07	1.68	-0.38	-	-1.36	-1.77
Transcript_contig_18888 (18888)	0.66	-0.09	0.55	0.15	-2.55	-0.46	1.66	0.46	-1.6	-3.23	-4.99
Transcript_contig_19348 (19348)	0.35	-0.35	0.41	0.52	0.08	-0.76	1.78	0.06	-	-4.97	-4.75
Transcript_contig_19818 (19818)	0.07	1.1	0.23	1.45	-1.13	-0.56	-0.38	-0.35	-	-2.33	0.01
Transcript_contig_22639 (22639)	-0.06	-	1.4	1.05	-0.95	0.35	1.82	-	-	-	-
Transcript_contig_23991 (23991)	0.25	0.98	-0.89	1.93	-	-	-0.43	1.12	-	-1.74	-1.77
Transcript_contig_2401 (2401)	0.22	-	0.68	1.42	-0.67	0.31	1.88	-	-	-	-
Transcript_contig_2528 (2528)	0.63	0.45	0.48	0.41	-1.87	-2.89	1.4	0.91	-	-2.94	-1.74
Transcript_contig_26984 (26984)	0.46	0.61	0.13	0.91	-0.68	-0.36	1.37	0.02	-	-3.42	-4.45
Transcript_contig_30062 (30062)	-0.25	-0.42	1.47	0.96	0.11	-	1.86	-	-	-	-
Transcript_contig_3845 (3845)	0.16	-0.46	0.02	0.14	-0.34	-1.61	1.53	0.35	-0.22	-1.04	-1.3
Transcript_contig_4071 (4071)	-0.28	-1.64	-1.64	1.92	-0.41	0.37	1.62	-	-	-	-0.69
Transcript_contig_4262 (4262)	-0.65	0.59	0.84	1.46	-	-	1.33	0.86	-	-	-
Transcript_contig_4557 (4557)	0.73	-0.56	0.89	1.07	-2.06	-1.2	1.79	-	-	-	-0.76
Transcript_contig_4916 (4916)	-0.51	0.51	0.4	1.47	0.48	0.14	0.23	-0.05	-2.63	-	-
Transcript_contig_5309 (5309)	-1.6	-	-0.69	1.61	-1.04	0.31	2.08	-	-1.83	-2.24	-0.83
Transcript_contig_5322 (5322)	-0.69	-1.24	0.28	1.05	-1.08	0.8	1.31	-3.71	-1.47	-0.19	-0.57
Transcript_contig_53746 (53746)	0.22	0.7	-1.6	-0.13	0.05	-0.32	0.54	0.93	-0.83	-0.49	-0.99
Transcript_contig_5716 (5716)	-0.2	-0.64	0.44	0.12	-0.65	-1.67	1.67	1.14	-	-	-0.51
Transcript_contig_5861 (5861)	0.7	-0.21	-0.14	0.21	0.82	-2.1	0.57	1.28	-1.87	-1.94	-
Transcript_contig_59883 (59883)	0.29	-0.13	0.16	1.56	1.12	-1.11	0.05	0.17	-	-	-
Transcript_contig_60286 (60286)	0.2	-0.05	1.45	0.73	-2.41	-2.48	1.28	-0.63	-	-0.71	-1.2
Transcript_contig_60630 (60630)	0.01	-0.15	1.02	0.6	-0.56	-0.13	1.46	-1.77	-1.35	-1.69	-2.29
Transcript_contig_60786 (60786)	1.09	1.02	0.32	0.72	-	-2.9	0.73	1.01	-	-	-2.64
Transcript_contig_60794 (60794)	-0.32	-	1.47	1.5	0.11	-	1.82	-	-	-	-
Transcript_contig_62515 (62515)	0.5	-0.01	0.18	0.44	0.2	-2.15	1.16	0.52	-3.81	-1.01	-1.0
Transcript_contig_62821 (62821)	-0.99	-1.5	-1.08	1.24	0.37	0.0	2.32	-	-	-	-
Transcript_contig_62876 (62876)	-0.25	-1.37	0.36	0.6	-0.91	0.8	1.34	-0.95	-0.11	-0.93	-2.36
Transcript_contig_63896 (63896)	0.34	0.65	-	0.84	-	-0.44	0.77	1.39	-	-	0.39
Transcript_contig_6463 (6463)	-0.87	-1.97	-0.67	1.15	0.48	0.41	1.95	-1.24	-	-2.1	-3.34
Transcript_contig_66305 (66305)	0.0	-0.03	0.71	1.46	1.05	-2.08	0.58	-0.28	-	-	-
Transcript_contig_66342 (66342)	0.8	0.91	-0.58	1.12	-1.94	-1.37	0.26	1.43	-	-	-
Transcript_contig_67614 (67614)	0.14	0.22	0.87	0.74	-0.63	-0.77	1.22	0.27	-	-2.42	-1.84
Transcript_contig_67889 (67889)	0.85	0.21	0.76	0.51	-0.74	-0.62	0.82	0.68	-	-	-1.75
Transcript_contig_67943 (67943)	0.84	0.02	-1.61	0.49	0.49	-2.4	1.46	0.73	-1.17	-	-
Transcript_contig_67997 (67997)	0.9	0.06	1.79	1.04	-	-	0.86	-	-0.36	-	-
Transcript_contig_68037 (68037)	-0.04	0.27	0.9	1.17	-1.76	-	0.69	0.24	-	0.13	-0.93
Transcript_contig_68134 (68134)	0.31	1.59	-	2.11	-	-	-	1.28	-	-	-
Transcript_contig_68284 (68284)	-0.48	-3.15	0.85	0.48	-0.98	0.73	1.85	-3.0	0.01	-	-3.65
Transcript_contig_69529 (69529)	-0.9	-0.75	1.09	0.82	-0.14	0.41	1.47	-0.12	-	-5.14	-
Transcript_contig_6976 (6976)	-0.17	-0.23	0.16	0.77	0.58	0.27	1.17	-1.57	-	-0.62	-1.03
Transcript_contig_7009 (7009)	-0.12	-0.04	0.83	0.77	-0.32	-0.6	1.78	-0.86	-	-	-2.5
Transcript_contig_7506 (7506)	0.49	0.16	-1.12	-0.05	0.6	-1.91	1.07	1.47	-	-1.97	-2.76
Transcript_contig_7852 (7852)	0.0	1.3	0.12	0.78	-0.98	-0.68	0.49	1.13	-	-	-
Transcript_contig_7958 (7958)	0.04	-0.3	0.81	0.82	-0.96	0.86	0.99	0.41	-	-	-
Transcript_contig_8127 (8127)	-0.69	0.84	-	1.17	-	-	-	2.67	-	-	-
Transcript_contig_81919 (81919)	-0.42	-0.7	0.64	1.64	0.51	-0.68	1.5	-	-	-	-3.58
Transcript_contig_83365 (83365)	0.8	0.87	0.74	1.34	-1.35	-	-0.31	1.02	-	-	-
Transcript_contig_84332 (84332)	0.19	0.67	-0.5	-0.46	0.19	-2.25	1.06	1.04	-3.6	-0.42	-0.98
Transcript_contig_85096 (85096)	0.34	-1.57	1.78	-0.12	0.01	-0.43	1.72	-	-	-	-
Transcript_contig_85930 (85930)	0.39	0.55	-0.89	0.27	-0.27	-2.0	0.87	1.35	-3.0	-1.19	-1.13
Transcript_contig_8984 (8984)	0.73	-1.28	1.89	0.97	-	-	0.39	0.74	-	-	-1.91
Transcript_contig_90415 (90415)	1.48	0.65	1.72	0.75	-	-	0.74	-	-	-	-
Transcript_contig_9109 (9109)	1.25	1.73	-	0.64	-	-	1.91	-	-	-	-
Transcript_contig_9242 (9242)	1.51	0.47	-1.05	1.36	-2.4	-2.42	1.25	-0.04	-	-	-
Transcript_contig_9401 (9401)	0.55	-0.41	1.11	0.21	-0.66	0.43	1.27	0.12	-	-	-
Transcript_contig_9434 (9434)	0.81	-0.85	0.89	0.9	-0.47	-1.7	0.34	1.42	-	-	-
Transcript_contig_9788 (9788)	0.08	-0.21	0.74	1.02	-1.32	-0.33	0.99	0.16	-0.05	-	-3.29

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.