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Heatmap: Cluster_123 (HCCA)

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(Showing raw values)

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Gene
4h after treatment
4h after treatment,No nitrate
8h after treatment
8h after treatment,No nitrate
20C
20h after treatment
20h after treatment,No nitrate
20h after treatment,Nocodazole added
36h after treatment
36h after treatment,No phosphate
Blue light,10min after light change
Blue light,60min after light change
Bohlin
CCAP1055/1,20C
CCAP1055/1,20C,High CO2,OligoDT primed
CCAP1055/1,20C,Low CO2,OligoDT primed
CCAP1055/1,20C,Normal CO2,OligoDT primed
CCMP2561
CCMP2561 Nitrase Reductase Knockout
CCMP632
CCMP632,24h
CCMP632,48h
CCMP632,72h
CCMP632,High light acclimated WT
CCMP632,Low light acclimated WT
NEPCC640,8h,1000ppmv CO2
NEPCC640,8h,390 ppmv CO2
No light,8h after treatment
Pt-1
Pt-1 8.6
Pt-1 8.6,With nitrogen
Pt-1 8.6,Without nitrogen
Red light,0min before light change
UTEX 646,Blue light
UTEX 646,No light
0.0 0.0 0.0 2.71 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
20.24 7.72 12.67 4.3 10.85 19.81 4.85 11.17 17.11 15.99 7.15 5.15 3.78 1.03 26.93 6.78 25.66 4.68 8.61 4.91 7.44 12.07 6.81 14.0 6.72 12.27 12.68 9.98 6.1 18.17 21.66 8.3 7.72 1.37 2.79
228.08 228.63 191.43 203.1 165.21 224.65 198.74 328.93 185.37 210.97 129.76 135.27 144.28 73.91 97.98 79.96 57.27 176.96 141.9 110.27 184.46 180.98 123.99 123.07 59.46 84.07 82.68 217.53 139.14 185.48 156.75 221.53 116.72 216.63 163.43
0.0 0.0 0.0 0.0 0.13 0.0 0.0 0.0 0.0 0.0 0.05 0.0 0.0 0.0 0.0 0.0 0.0 0.36 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
0.0 0.0 0.0 0.12 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.05 0.0 0.0
9.2 6.66 6.06 3.24 1.23 8.55 3.8 4.28 3.45 4.61 2.03 2.51 0.0 0.65 0.0 0.14 0.09 0.09 0.03 0.05 0.0 0.0 0.0 0.0 0.0 0.26 0.23 1.91 0.03 1.07 0.14 0.0 2.06 3.06 0.6
121.89 112.46 93.87 84.57 26.18 99.66 61.33 133.83 63.82 71.35 1.48 1.58 3.85 0.47 17.58 21.78 18.4 24.64 2.75 13.18 0.83 2.5 1.87 32.62 11.44 8.87 5.76 46.15 2.86 56.84 98.71 40.51 1.43 10.48 0.83
51.67 63.36 65.25 78.62 34.11 66.91 79.47 58.87 70.53 75.61 21.94 27.4 21.06 19.08 25.39 31.3 44.65 37.09 42.44 37.73 22.38 22.75 18.1 59.35 47.46 46.56 49.25 54.98 51.13 52.63 63.46 34.08 29.83 39.23 37.15
9.87 13.93 6.92 11.75 5.02 11.94 11.75 5.45 10.47 11.54 1.75 2.47 6.7 1.34 0.7 1.87 0.06 6.45 6.72 1.43 1.44 4.2 0.21 1.89 0.49 1.75 1.05 4.97 7.01 3.71 3.57 5.72 3.03 4.83 1.03
128.54 110.97 84.58 61.18 22.59 94.52 47.22 56.47 55.62 103.57 51.92 78.66 68.04 44.7 15.11 8.83 9.01 33.99 24.43 20.62 38.95 23.82 47.79 41.71 29.81 4.3 1.68 124.34 38.79 45.5 28.16 59.94 89.41 33.62 40.47
44.72 94.64 41.27 66.71 12.07 35.85 54.08 35.39 25.13 34.01 3.42 4.33 5.02 4.84 5.47 19.26 5.46 36.07 39.93 20.9 0.01 0.12 0.0 2.52 1.38 24.56 8.06 47.54 25.35 10.95 17.77 8.71 4.66 10.23 19.22
0.79 1.32 0.49 1.59 0.69 0.84 0.79 1.11 0.55 0.92 0.03 0.01 0.04 0.0 0.0 0.0 0.0 0.01 0.01 0.09 0.37 0.02 0.07 0.0 0.0 0.12 0.07 0.29 0.21 0.02 0.0 0.0 0.03 0.0 0.0
0.0 0.0 0.0 0.0 0.11 0.0 0.0 0.0 0.0 0.0 0.09 0.0 0.0 0.0 0.0 0.15 0.0 0.41 0.12 0.0 0.0 0.04 0.0 0.0 0.0 0.11 0.11 0.0 0.02 0.0 0.0 0.0 0.04 0.03 0.08
91.53 85.33 64.37 66.09 40.89 74.06 66.29 60.48 59.53 74.6 10.07 11.82 33.81 5.71 41.49 28.35 36.11 46.7 37.94 30.5 70.07 53.01 43.43 50.74 23.95 56.65 44.03 83.41 41.16 63.75 64.84 66.06 11.62 17.92 24.91
0.11 0.0 0.0 0.19 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
0.0 0.0 0.0 0.0 0.0 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 2.15 0.0 0.14 0.15 0.0 0.0 0.0 0.0 0.0 0.09 0.0 0.0 0.0 0.09 0.28 0.02 0.0 0.0 0.12 0.54
7.49 8.44 5.85 9.04 4.35 8.68 10.08 5.65 9.41 14.59 4.72 4.24 3.3 0.92 2.78 2.23 0.2 5.13 5.32 2.1 2.51 5.64 2.59 2.68 1.45 2.05 5.84 15.69 3.65 3.85 4.55 3.99 4.84 4.12 3.24
8.35 3.13 5.87 2.56 0.41 5.13 0.25 7.33 1.26 1.68 0.02 0.0 0.0 0.0 0.0 0.0 0.09 0.2 0.16 0.0 0.0 0.0 0.0 0.0 0.43 0.0 0.0 1.4 0.0 0.56 0.0 0.0 0.03 0.0 0.0
2.32 3.15 2.61 2.54 2.67 2.17 2.18 4.35 1.75 1.99 0.26 0.18 0.0 0.0 0.33 0.15 0.15 0.98 1.15 0.62 0.0 0.01 0.0 0.19 0.71 0.02 0.0 0.99 0.06 2.75 1.02 2.54 0.28 0.14 0.01
28.64 26.0 28.44 22.87 9.47 38.42 18.67 81.67 22.84 28.34 6.81 5.91 2.76 6.72 7.62 9.35 1.38 23.32 13.76 2.41 18.97 22.26 10.05 12.65 3.55 9.58 8.09 2.05 9.99 30.42 23.8 37.31 7.53 8.23 2.55
14.26 11.6 8.62 9.26 8.36 11.76 9.58 8.5 8.0 8.76 5.21 5.64 4.65 2.49 6.88 3.45 2.76 6.72 7.67 4.01 3.12 5.97 2.32 4.7 1.43 7.99 11.51 15.72 4.64 10.22 7.02 8.04 7.53 9.58 9.19
81.26 52.13 51.57 43.43 48.17 90.44 55.68 35.19 94.82 77.49 38.5 17.29 17.01 2.33 96.25 53.81 149.9 42.6 40.55 25.12 32.0 52.73 30.89 141.55 86.56 53.46 67.78 120.01 21.23 83.66 124.26 34.49 21.95 38.21 38.21
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.68 0.0 0.33 0.01 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.06 0.23 0.0 0.0 0.0 0.0
0.43 1.03 0.3 0.23 0.26 1.01 0.48 0.07 0.21 0.67 0.06 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.01 0.03 0.07 0.09 0.0 0.0 0.0 0.0 0.0 0.08 0.0 0.14 0.0 0.0 0.0 0.0 0.0
0.11 0.46 0.1 0.1 0.27 0.13 0.04 0.09 0.04 0.08 0.02 0.0 0.0 0.0 0.01 0.0 0.01 0.01 0.02 0.01 0.01 0.08 0.0 0.01 0.0 0.0 0.0 0.03 0.0 0.01 0.0 0.0 0.01 0.0 0.0
5.55 7.0 5.86 6.76 2.83 5.61 9.14 2.52 8.59 6.11 0.79 0.81 1.01 0.62 0.77 1.17 0.25 3.36 3.55 0.61 0.11 0.27 0.08 0.42 0.07 2.34 1.82 2.14 1.68 1.65 2.27 1.09 1.47 3.16 1.63
91.41 55.57 62.14 39.25 57.27 100.38 45.88 55.64 78.35 72.29 35.66 31.14 61.41 18.55 57.31 33.75 117.23 43.16 50.47 31.55 16.99 34.74 16.25 138.54 50.45 41.43 55.78 35.93 44.03 84.57 73.59 74.74 45.25 36.91 44.55
0.0 0.16 0.0 0.34 0.43 0.0 0.0 0.0 0.0 0.0 0.27 0.23 0.15 0.0 0.0 0.0 0.0 0.12 0.08 0.04 0.0 0.47 0.0 0.0 0.0 2.29 0.5 0.32 0.0 0.0 0.0 0.0 0.15 0.05 0.0
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
5.32 11.33 3.2 9.5 0.65 3.04 8.62 2.18 7.73 4.42 1.09 1.27 0.08 0.0 0.0 0.0 0.0 0.02 0.01 0.0 0.01 0.03 0.0 0.04 0.04 0.03 0.0 7.57 0.0 0.06 0.05 0.0 1.4 0.01 0.0
3806.5 1968.47 3038.17 824.21 27.32 2188.23 493.99 752.02 1436.6 4071.57 88.6 119.22 22.11 34.24 3.89 5.83 0.47 26.32 41.49 16.75 34.52 53.93 19.04 21.52 7.31 11.23 3.45 3085.25 16.75 17.92 16.2 26.06 167.8 133.78 394.58
61.03 50.53 39.16 23.66 6.54 41.23 22.31 14.64 23.69 104.0 4.05 4.4 1.54 1.82 0.46 1.17 0.07 12.1 9.09 1.1 2.1 3.08 3.14 1.54 1.03 2.56 2.76 50.73 2.24 3.82 4.91 3.42 7.61 4.03 5.01
361.82 434.53 420.24 500.36 95.41 457.94 421.5 141.6 997.76 932.7 158.54 81.33 155.36 17.98 114.74 298.7 48.86 236.17 129.3 541.5 67.36 111.7 83.17 147.69 58.63 275.22 188.23 335.09 83.95 77.14 194.58 7.37 120.65 251.81 25.61
5.99 3.35 5.92 3.01 0.0 3.82 1.35 1.72 0.07 4.44 0.04 0.0 0.0 0.0 0.0 0.0 0.0 0.09 0.07 0.0 0.0 0.0 0.0 0.0 0.0 1.9 0.82 0.28 0.28 0.0 0.0 0.0 0.0 0.0 0.02
0.0 0.0 0.0 0.08 0.05 0.0 0.0 0.08 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02 0.01 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.06 0.03 0.0 0.0 0.0 0.0
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.32 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 1.0 0.0 2.33 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.18 0.0 0.0 0.0 0.0 0.0 0.31
3.85 2.73 2.42 1.51 1.7 2.94 1.18 3.08 1.58 2.11 0.15 0.22 0.16 0.0 0.0 0.4 0.25 0.57 0.38 0.05 0.0 0.0 0.0 0.0 0.07 0.0 0.0 1.35 0.03 0.44 0.04 0.0 0.24 0.67 0.04
59.93 83.7 57.96 79.75 23.34 62.33 66.29 53.43 64.2 102.39 24.76 30.11 23.82 9.64 9.14 16.11 5.9 17.17 17.27 17.0 2.25 10.35 3.26 21.4 20.18 42.71 20.71 88.04 19.35 24.44 33.57 19.53 32.7 31.24 29.53
713.99 858.62 797.92 645.24 67.53 2255.19 945.57 535.17 1467.74 2158.01 28.77 25.48 19.61 50.34 11.54 30.62 6.46 95.76 241.79 131.93 77.11 173.86 189.89 11.81 2.84 8.58 1.62 18.14 34.99 15.7 24.67 11.13 37.67 1.69 2.74
109.5 124.34 115.47 112.59 12.75 222.63 115.16 177.39 123.54 113.88 6.35 7.55 102.64 5.52 23.5 25.27 6.76 15.19 49.66 1.67 100.11 52.07 10.07 13.73 40.09 8.36 6.83 9.31 17.47 3.42 5.04 1.99 5.05 27.57 13.57
63.29 90.04 91.71 86.52 1.24 132.3 73.85 136.12 56.4 95.08 1.76 2.03 41.56 1.48 3.14 1.34 0.24 4.08 11.96 0.12 8.93 9.06 0.9 0.45 0.35 1.22 2.19 2.18 1.78 0.27 0.66 0.04 1.2 7.1 1.04
25.62 27.19 18.9 27.19 17.65 27.51 37.89 15.42 33.25 33.6 15.85 15.9 5.17 6.34 11.86 10.78 9.1 12.05 14.92 4.35 7.25 11.35 3.36 11.33 1.46 22.41 19.89 49.96 8.49 17.85 20.05 14.24 19.11 17.22 11.6
36.72 29.13 28.37 27.8 15.08 41.33 27.01 36.08 37.42 37.25 5.08 6.75 10.42 1.82 9.13 5.2 13.65 13.18 11.94 6.7 3.95 5.65 2.4 17.14 8.25 19.45 12.87 36.52 8.67 23.6 24.54 20.39 7.23 18.1 28.06
39.61 52.23 38.06 32.91 4.76 32.48 20.68 20.41 15.92 18.02 1.15 0.83 3.29 0.15 0.26 0.0 0.1 13.75 0.87 7.85 0.0 0.26 0.0 4.4 1.61 9.18 3.68 25.42 0.96 13.33 27.28 7.85 0.42 2.13 0.82
0.19 0.21 0.19 0.14 0.06 0.32 0.16 0.03 0.29 0.21 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.04 0.0 0.0 0.2 0.0 0.0 0.0 0.0 0.0 0.0 0.0
588.67 445.73 435.23 260.82 17.0 410.79 169.61 1080.07 222.43 324.51 107.0 166.71 11.83 39.95 42.54 54.22 50.85 53.49 88.59 9.66 5.43 9.56 7.76 19.76 5.83 45.62 16.7 240.35 22.91 20.61 35.3 12.08 156.51 351.85 14.25
13.64 15.03 10.01 12.35 6.04 14.37 14.24 10.98 11.61 10.37 3.42 4.22 0.04 0.9 0.0 0.47 0.21 1.96 1.35 0.16 0.05 0.0 0.0 5.07 6.5 0.42 0.17 7.27 0.32 12.09 8.57 14.03 4.22 1.81 0.77
0.0 0.0 0.0 0.0 0.31 0.0 0.0 0.0 0.0 0.0 0.21 0.1 0.0 0.0 0.1 0.0 0.0 0.1 0.0 0.14 0.15 0.05 0.0 0.0 0.0 0.0 0.0 0.21 0.07 0.0 0.0 0.0 0.15 0.15 0.0
0.15 0.43 0.45 0.63 0.0 0.23 0.45 0.44 0.17 0.38 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.04 0.0 0.12 0.0 0.0 0.0 0.0 0.02 0.0 0.0
0.53 0.93 0.24 0.52 0.0 0.72 0.46 0.22 0.34 0.59 0.0 0.03 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.33 0.0 0.0 0.0 0.0 0.02 0.0 0.0
1.18 0.85 0.95 0.88 1.12 1.3 0.47 1.46 0.94 1.88 0.0 0.0 0.28 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.1 0.23 0.0 0.0 0.0 0.0 0.0 1.37 0.0 0.13 0.0 0.0 0.0 0.0 0.0
780.79 420.02 776.76 313.57 344.31 647.29 90.67 968.04 549.91 546.58 520.16 472.67 61.71 99.99 1858.08 860.49 1689.97 496.41 556.31 186.05 437.07 685.72 192.58 1746.54 558.26 691.56 561.99 352.05 201.69 1016.35 1224.07 349.24 701.45 312.64 208.45
13.41 15.34 8.92 12.72 5.99 12.34 14.28 8.68 11.68 12.83 1.47 2.21 1.53 1.06 1.74 1.08 1.24 5.17 4.59 0.82 2.74 1.61 2.29 4.4 4.88 2.01 1.23 14.16 1.65 12.81 9.83 15.74 1.92 4.63 0.38
97.35 155.34 57.54 164.63 18.48 81.23 121.73 82.29 110.82 110.81 12.68 23.51 19.29 15.02 7.62 6.21 0.0 31.67 18.76 0.0 1.11 0.84 0.0 7.59 1.7 10.76 4.85 91.92 5.89 4.25 3.94 4.86 17.97 24.97 21.21
1557.48 2597.05 2476.67 1946.34 2309.5 3629.66 1543.54 4034.91 3426.09 3910.74 944.39 716.5 817.24 672.68 1779.72 3305.32 1119.06 1486.85 820.42 3808.19 2759.68 3860.23 2616.28 3030.68 1985.29 1354.5 353.59 32.66 296.34 1924.73 3628.21 568.54 965.56 736.02 17.83
44.04 35.62 40.71 26.58 4.42 29.59 4.82 33.39 17.44 22.35 1.04 0.8 0.37 0.72 3.85 5.84 3.36 10.12 5.38 61.67 0.94 4.14 0.99 11.2 2.65 15.83 17.89 16.27 4.0 4.57 9.93 0.81 1.36 4.3 0.32
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.22 0.03 0.0 0.0 0.0 0.0 0.0 0.0 0.11 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
7.47 11.39 6.81 11.03 6.19 10.69 14.26 12.55 10.45 11.35 7.58 11.84 4.01 2.3 2.96 1.24 1.88 3.9 4.29 2.2 0.74 3.66 1.06 9.6 4.44 3.59 4.95 5.11 2.71 11.83 9.17 8.98 10.81 6.72 4.17
17.59 24.52 15.57 24.54 8.84 20.22 40.25 22.86 29.57 28.58 11.75 14.5 0.0 4.01 2.28 0.39 2.24 5.45 4.66 2.38 5.18 18.65 5.82 24.89 13.5 0.0 0.0 37.96 8.31 20.67 10.85 26.55 13.61 8.16 5.54
23.78 21.3 26.45 36.21 10.39 28.32 34.74 26.9 37.78 49.55 25.64 39.3 0.0 10.25 1.11 0.96 5.17 6.27 10.08 2.85 10.67 23.56 10.2 46.41 47.42 0.0 0.0 53.94 13.47 12.16 12.4 2.1 38.76 10.31 12.99
71.68 75.65 55.68 61.88 23.49 63.46 61.01 52.17 48.12 57.79 21.0 31.91 25.6 17.38 12.34 11.43 17.57 24.37 25.6 13.01 4.36 11.43 3.65 31.62 8.9 22.1 21.08 38.62 15.18 33.22 33.4 32.08 30.78 58.99 61.23
4.26 7.41 4.42 8.04 4.61 5.35 35.78 5.88 5.17 4.08 2.14 2.07 0.4 1.61 2.29 1.23 1.86 2.94 1.22 1.17 3.61 6.37 3.38 2.13 2.27 0.55 0.72 5.54 0.9 1.23 1.12 1.38 2.67 0.97 2.37
919.29 832.43 752.08 712.82 769.06 1199.42 840.18 672.71 1011.27 980.93 537.11 447.25 336.35 246.16 703.24 582.96 684.35 621.01 520.47 533.35 362.63 621.54 375.34 926.35 807.12 803.01 611.78 1182.56 589.23 729.1 1134.02 575.07 483.99 569.82 936.47
88.44 51.4 72.97 33.39 58.42 85.21 22.43 85.65 72.96 55.94 84.08 63.18 27.56 10.46 77.61 76.11 101.74 63.28 76.34 40.46 49.49 69.63 48.7 76.3 38.64 68.08 59.45 89.91 43.7 41.86 59.47 32.62 96.05 116.9 124.11
294.0 251.52 248.8 222.12 98.35 218.67 160.38 302.66 119.08 168.74 84.92 107.48 67.75 69.17 52.92 47.21 17.78 168.37 83.26 59.0 132.93 146.92 63.4 88.44 24.97 69.36 70.44 124.63 85.15 224.74 169.76 272.76 95.88 169.41 54.27

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)