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Heatmap: Cluster_115 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
4h after treatment
4h after treatment,No nitrate
8h after treatment
8h after treatment,No nitrate
20C
20h after treatment
20h after treatment,No nitrate
20h after treatment,Nocodazole added
36h after treatment
36h after treatment,No phosphate
Blue light,10min after light change
Blue light,60min after light change
Bohlin
CCAP1055/1,20C
CCAP1055/1,20C,High CO2,OligoDT primed
CCAP1055/1,20C,Low CO2,OligoDT primed
CCAP1055/1,20C,Normal CO2,OligoDT primed
CCMP2561
CCMP2561 Nitrase Reductase Knockout
CCMP632
CCMP632,24h
CCMP632,48h
CCMP632,72h
CCMP632,High light acclimated WT
CCMP632,Low light acclimated WT
NEPCC640,8h,1000ppmv CO2
NEPCC640,8h,390 ppmv CO2
No light,8h after treatment
Pt-1
Pt-1 8.6
Pt-1 8.6,With nitrogen
Pt-1 8.6,Without nitrogen
Red light,0min before light change
UTEX 646,Blue light
UTEX 646,No light
0.29 0.71 -0.23 0.46 -0.02 0.38 0.91 -0.21 0.21 0.42 -0.3 -0.16 0.14 -0.07 -0.73 -0.64 -1.94 0.36 0.45 -1.59 -0.31 0.88 -0.33 -0.09 -0.83 -0.28 0.09 -0.97 -1.13 0.65 0.46 0.63 -0.2 -0.48 -1.95
0.08 0.69 -0.08 0.83 0.08 0.46 0.9 -0.23 0.8 0.82 -0.14 0.11 0.18 -1.19 -0.76 -0.46 -1.04 0.11 0.78 -0.46 -0.36 0.72 -0.2 0.2 -1.66 -0.92 -1.43 -0.13 -1.32 -0.06 -0.31 0.13 0.14 -0.59 -1.14
0.02 1.37 0.11 1.28 0.4 0.49 1.04 1.0 0.08 0.84 -32.34 -35.49 -3.04 -34.41 -0.69 0.82 -0.44 0.07 0.23 -1.38 1.05 1.46 0.59 -0.9 -2.06 0.06 -1.88 -0.21 -1.57 -0.21 0.03 -0.1 - -30.15 -35.39
-1.08 0.4 -1.0 0.37 -1.02 -0.08 1.16 -0.63 0.02 0.41 -0.69 0.06 2.59 0.36 -1.16 -0.34 -2.12 1.01 0.83 0.28 -1.27 -0.67 -0.64 -0.06 -2.07 -3.27 -4.58 -4.6 -1.9 0.33 -1.78 0.84 -0.11 0.47 -1.67
0.43 0.62 0.29 0.53 -0.24 0.93 0.64 0.16 0.88 0.98 0.18 0.13 -1.13 -0.6 -0.65 -0.77 -2.05 0.38 0.53 -1.14 0.34 0.82 -0.11 -0.91 -2.7 -1.07 -1.75 -1.0 -1.43 -0.22 0.33 -1.43 0.47 0.14 -0.09
0.71 0.96 0.26 0.92 0.03 1.15 0.97 -0.07 1.02 1.05 -0.73 -0.42 -1.41 0.02 0.15 -0.18 -0.86 0.52 0.77 -1.0 0.08 0.22 0.1 -0.57 -2.81 -1.22 -1.04 -1.12 -1.69 -1.21 -1.29 -1.23 -0.48 0.43 -5.0
-0.01 0.78 0.02 0.68 0.08 0.68 0.72 0.06 0.76 0.86 -0.52 -0.33 -1.65 -0.27 -0.14 -0.0 -0.73 0.4 0.48 -0.24 1.01 1.33 0.83 -0.65 -1.82 -1.15 -2.05 -0.61 -2.66 -1.03 -0.67 -0.76 -0.21 -1.04 -1.6
0.6 0.43 0.19 0.32 0.6 0.9 0.29 -0.21 1.12 0.95 -0.53 -0.05 -1.46 -2.3 0.04 -0.4 -1.91 0.25 0.23 -1.21 0.84 0.49 0.3 -1.07 -1.76 -1.64 -1.34 0.43 -1.2 -0.89 -0.97 -0.58 -0.07 0.93 -0.24
-0.21 0.65 -0.58 0.33 -1.53 0.71 0.74 0.15 0.43 0.83 0.68 0.87 -0.19 -0.52 -0.8 -0.8 -1.57 0.94 1.21 -1.56 -0.69 0.71 -0.62 -2.21 -3.59 -3.77 -3.69 -1.98 -1.66 -0.27 -1.8 0.64 1.09 1.48 -2.63
0.45 0.18 -0.15 -0.1 0.51 1.02 0.54 0.14 0.91 0.72 -0.36 -0.8 -1.02 -0.57 0.56 -0.83 0.77 0.02 0.41 -0.79 0.2 0.33 -0.07 0.23 -0.58 0.06 -0.3 -0.63 -0.79 -0.37 0.06 -0.97 -0.31 -1.8 -2.0
-0.81 0.3 -0.78 0.23 0.55 -0.38 0.4 0.17 -0.46 -0.05 0.22 0.36 -0.34 0.22 -1.2 -0.4 -2.85 0.39 -0.25 -0.25 0.88 1.21 0.85 -0.33 -0.96 -1.27 -1.94 -0.96 -0.67 0.45 -0.12 1.01 0.2 0.14 -0.52
0.83 0.63 0.15 0.01 0.03 1.84 1.01 0.84 0.85 1.21 -0.33 -1.0 -0.58 -0.46 0.01 -2.74 0.12 0.56 0.92 -1.53 -0.61 0.21 -0.75 -0.49 -2.25 -2.03 -2.33 -3.94 -1.33 -0.01 -0.12 0.16 -0.45 -1.57 -5.24
-0.5 -0.18 -0.71 -0.05 0.21 -0.19 0.16 -1.15 0.13 -0.06 -0.05 0.2 1.16 -0.53 -0.17 -0.33 -0.9 0.92 0.73 0.12 0.23 0.04 0.64 0.48 0.45 -1.21 -2.41 -0.55 -0.59 -0.83 -1.0 -0.91 0.34 -0.34 1.09
-0.15 0.5 -0.36 0.37 -0.06 -0.08 1.23 -0.32 0.17 0.24 -0.37 -0.03 1.02 -0.9 -0.9 -0.8 -0.94 0.54 0.84 0.33 0.6 0.88 0.93 -0.04 -1.47 -1.61 -2.08 -0.14 -0.99 -0.62 -0.91 -0.63 -0.22 -0.91 0.04
-0.51 -0.31 -0.77 -0.13 0.3 -0.01 0.34 -0.58 0.45 0.34 -0.42 -0.05 0.89 -0.82 -1.32 -0.79 -2.66 0.48 0.52 -0.13 0.72 0.53 0.71 -0.51 -1.5 -2.36 -2.75 0.46 -0.28 0.36 -0.96 1.0 0.01 0.58 0.63
0.36 0.76 0.1 0.78 0.01 0.68 0.92 0.11 0.61 0.6 -0.29 0.16 -0.81 -1.61 -0.47 -0.35 -2.29 -0.16 0.6 -1.27 -0.47 0.36 -0.85 -1.07 -2.04 -0.48 0.24 0.21 -1.37 0.16 -0.08 0.2 0.03 0.87 -1.15
0.1 0.47 -0.26 0.35 0.3 0.45 0.42 -0.79 0.49 0.39 -0.7 -0.57 -0.35 -1.71 -0.2 0.01 -2.75 0.51 0.62 0.17 0.4 0.7 0.39 0.16 -0.53 -0.29 0.55 -1.13 -1.85 -0.2 -0.2 -0.52 -0.37 -0.34 0.71
-0.41 0.6 -0.21 1.17 0.19 0.03 0.97 0.27 0.01 0.36 -0.65 -0.21 -1.44 -0.85 -1.11 -0.63 -2.71 0.49 0.34 -0.9 0.98 1.2 1.08 -0.15 -1.03 -1.76 -2.65 -0.18 -0.03 0.01 -0.09 0.51 -0.19 -0.87 -2.21
0.74 0.9 0.3 0.65 0.66 1.52 1.11 -0.19 1.82 1.56 -0.56 -0.63 -1.34 -3.2 -0.01 -0.15 -0.82 -0.01 0.12 0.47 -1.76 -0.47 -0.94 -1.19 -2.6 -1.3 -2.48 -0.54 -0.96 -1.26 -0.51 -2.49 -0.15 -0.62 -2.48
0.07 0.08 -0.58 -0.18 -0.35 0.22 0.15 -0.22 0.09 0.1 0.42 0.04 0.13 -0.37 -0.36 -0.96 -1.37 0.34 0.57 -0.83 0.26 0.83 0.13 -0.35 -0.88 0.08 -0.13 -0.05 -0.74 0.12 -0.47 0.51 -0.09 0.77 0.34
0.47 0.34 -0.03 0.15 0.33 0.42 -0.1 -0.44 0.49 0.35 -0.14 0.02 -0.04 -0.05 -0.11 -0.26 -0.44 0.46 0.46 -0.82 0.69 -0.24 0.66 0.12 -0.53 -2.05 -2.26 -0.33 -0.47 -0.54 -0.61 -0.3 -0.06 1.0 -0.46
1.01 0.46 0.22 -0.6 0.07 1.73 -0.25 -0.3 1.29 1.22 0.89 -0.37 -3.42 -2.13 0.44 -1.6 0.41 -0.58 0.61 -1.6 -0.1 1.34 -0.35 -1.15 -3.48 -1.45 -1.48 -4.14 -1.5 -0.55 0.51 -2.59 0.47 -0.18 -4.63
-0.03 1.08 0.46 1.12 -0.72 0.91 1.34 0.33 0.31 0.89 -0.14 -0.44 -0.58 -0.31 -1.0 -0.71 -0.83 0.79 0.87 -0.08 -0.78 -0.28 -1.04 -0.41 -2.72 -2.68 -4.14 -4.18 -0.67 0.15 0.08 0.46 0.09 -0.03 -1.33
0.11 -0.07 -0.07 -0.28 0.18 0.65 -0.03 0.51 0.78 0.65 0.41 0.38 -1.23 0.07 0.55 0.06 -0.67 0.56 0.67 -1.31 0.29 0.5 -0.45 0.09 -2.73 -1.39 -2.56 -1.7 -1.48 -0.27 -0.48 -0.34 0.68 0.68 -0.4
0.23 1.11 0.66 1.21 -0.66 0.67 0.96 1.01 0.16 0.84 -0.4 -0.02 -2.61 -0.89 -0.65 -0.11 -1.81 0.39 0.47 -2.31 0.77 1.26 -0.03 -0.56 -1.88 -1.21 -1.42 -1.76 -1.84 -0.17 -0.3 0.41 -0.52 -1.63 -6.07
0.78 1.03 0.32 0.51 0.48 1.46 1.06 -0.21 1.7 1.41 -1.16 -1.27 -1.68 -2.38 0.41 -0.04 -0.6 0.1 -0.12 -0.35 -0.0 0.31 -0.21 -1.17 -3.38 -0.98 -1.4 -0.81 -2.24 -0.74 -0.05 -2.5 -0.59 -0.69 -2.88
0.02 0.11 0.12 0.26 0.39 1.08 0.72 0.32 0.96 0.8 0.09 -0.51 -3.49 -0.42 -1.21 -2.1 -1.7 0.61 0.88 -0.85 0.66 2.04 0.18 -0.5 -4.38 -3.41 -5.6 -3.29 -2.13 -0.03 -0.91 0.59 0.09 -0.07 -4.42
-0.43 0.2 -0.71 0.37 0.25 -0.03 0.69 -0.59 0.19 0.46 -0.18 -0.0 -0.49 -1.18 -1.02 -0.53 -1.95 0.63 0.48 0.28 0.94 1.19 0.87 0.02 -0.58 -2.08 -3.06 0.13 -0.47 0.0 -0.95 0.54 0.14 -0.67 0.01
-0.37 0.43 -0.68 0.18 0.05 0.09 0.45 -0.75 0.04 0.05 -0.1 0.33 -0.01 -0.69 -0.78 -0.61 -2.34 0.67 0.47 0.1 1.06 1.06 1.01 -0.12 -0.46 -2.75 -3.76 -0.36 -0.8 0.08 -0.97 0.7 0.35 0.15 -0.46
0.93 0.47 1.05 -0.01 0.42 1.35 -0.71 0.35 0.77 0.87 0.55 -0.2 -1.34 -0.79 0.1 -1.21 0.94 0.04 0.9 -0.83 -4.4 -1.23 -5.07 -0.38 -2.21 -0.04 -0.75 -1.88 -1.55 -0.07 0.09 -0.04 0.65 -0.33 -2.83
0.53 0.56 0.04 0.54 -0.01 0.81 0.85 -0.41 1.2 0.94 -1.08 -1.06 -0.55 0.03 0.12 0.15 -0.43 0.55 0.74 -0.28 0.19 -0.04 0.35 0.2 -1.06 -1.23 -1.8 -0.01 -1.04 -1.13 -1.43 -0.61 -0.88 -0.31 -1.03
0.2 0.56 1.05 0.91 -0.68 0.7 0.69 0.29 0.82 0.24 -0.59 -1.24 0.23 -1.29 -0.61 0.35 -1.65 0.34 0.69 -0.08 0.22 -0.32 -0.18 0.41 -1.07 -1.49 -2.09 0.55 -0.47 -0.62 -0.4 -0.89 -1.26 -0.13 -0.14
-0.07 0.47 -0.06 0.27 -0.41 0.26 0.27 0.2 -0.34 0.1 0.44 0.4 -0.4 -0.51 -1.14 -1.29 -2.54 0.05 0.06 -1.38 0.75 1.12 0.23 -0.25 -1.19 -1.12 -1.38 -0.11 -0.47 0.44 -0.42 1.17 0.17 0.04 0.5
0.37 0.45 0.35 0.54 -0.05 0.81 0.64 0.0 0.68 0.74 -0.17 0.19 -2.49 -0.52 0.13 -0.3 0.09 0.69 1.02 -1.34 -0.71 -0.1 -0.76 -0.33 -2.21 -1.29 -1.69 -0.61 -1.62 0.18 -0.47 0.68 -0.18 0.42 -0.71
0.72 0.57 0.23 0.38 0.13 1.15 1.01 -0.23 1.27 1.26 -0.4 -0.63 -2.11 -1.59 0.51 0.12 -1.04 0.47 0.39 -0.56 0.6 0.68 0.1 -0.67 -2.7 -1.84 -2.43 -0.5 -1.46 -1.0 -0.63 -0.82 -0.29 -0.35 -2.01
0.07 0.72 -0.43 0.47 0.19 0.87 0.78 -0.13 1.09 0.86 -0.19 0.0 -0.81 -0.7 -0.31 -0.7 -1.72 0.69 0.65 -1.37 0.63 0.3 -0.47 -0.9 -2.56 -2.65 -3.47 -1.6 -1.03 -1.2 -2.11 -0.25 0.3 1.54 0.47
0.72 0.33 0.26 0.39 -0.04 0.47 0.62 0.28 0.22 0.23 0.32 0.44 0.72 -1.48 -0.67 -0.99 -2.29 0.91 0.5 -2.24 0.02 0.49 -0.44 -0.36 -2.09 -0.55 -1.0 0.76 -1.46 -1.64 -1.78 -1.87 0.76 0.55 0.3
0.42 0.77 0.37 0.6 0.48 0.76 0.72 -0.11 0.88 0.97 0.02 -0.1 -1.79 -1.92 0.37 -0.13 -0.22 0.18 0.15 -1.34 -0.01 0.76 0.31 -0.4 -2.64 -0.93 -1.7 0.52 -0.96 -1.36 -1.3 -1.04 0.09 -0.04 -0.87
0.97 1.43 0.6 1.23 -0.44 1.66 1.15 0.44 1.14 0.88 -0.07 -0.37 -1.77 -0.53 -1.22 -1.51 -2.69 0.22 0.48 -1.25 -0.45 0.91 -1.04 -1.27 -3.17 -1.29 -0.09 -3.55 -4.21 -0.89 -0.6 -1.41 0.12 -0.79 -6.95
-0.25 -0.02 -0.34 0.04 -0.0 0.02 0.26 -0.45 -0.0 0.08 -1.06 -0.66 0.41 -0.34 -0.28 -0.31 -1.44 0.53 0.31 0.42 0.45 -0.06 0.36 0.31 -0.33 -1.66 -2.0 0.28 -0.16 0.5 -0.36 1.19 -0.56 0.61 0.14
1.09 1.05 0.54 0.88 0.17 1.21 0.85 -0.09 0.88 1.13 -0.48 -0.14 -1.29 -0.98 -0.13 -0.16 -3.01 0.56 0.1 -0.32 0.22 0.09 -0.65 -1.37 -3.08 -1.56 -1.87 -0.22 -1.34 -1.09 -0.84 -0.97 -0.03 0.28 -0.95
-0.43 0.99 0.12 1.08 0.18 1.3 1.26 -0.28 1.42 1.28 -0.25 -0.28 -1.2 -3.38 -0.17 0.26 -1.14 1.07 0.51 0.17 -0.25 0.36 0.19 -1.26 -2.83 -0.12 -3.11 -3.19 -3.71 -1.53 -0.63 -3.06 0.25 -1.33 -4.47
-0.54 0.09 -0.62 0.4 -0.0 -0.07 0.95 -0.96 0.54 0.91 -0.42 0.04 -0.58 -0.95 -0.53 0.1 -1.49 0.55 0.49 0.83 0.66 0.46 0.65 -0.42 0.28 -2.2 -2.6 0.59 0.08 -0.11 -1.34 0.68 -0.14 -1.66 -1.94
0.14 0.32 0.29 1.15 0.21 0.31 0.79 0.57 0.52 0.43 -0.72 -0.16 -1.06 -0.77 -0.81 -0.84 -2.53 0.41 -0.34 -1.25 -0.23 0.35 -0.46 -0.12 -1.84 -0.07 -0.84 -0.22 -0.74 0.67 0.87 0.53 -0.36 0.45 -1.49
-0.41 0.09 -0.52 0.12 0.18 0.08 0.36 -0.48 0.41 0.29 -0.75 -0.7 1.0 -0.19 -0.41 -0.34 -1.29 0.67 0.48 0.27 0.88 -0.4 0.83 -0.34 -0.13 0.02 -0.11 -1.67 -0.72 0.32 -0.54 0.32 -0.63 -0.02 -0.57
0.3 0.7 0.79 0.71 -0.83 0.68 0.8 1.14 0.31 0.59 -0.33 0.06 0.28 0.3 -0.69 -0.49 -1.3 0.29 0.54 -1.8 0.42 0.56 -1.08 -0.55 -3.72 -2.44 -3.55 -0.74 -1.48 0.08 -0.97 0.54 0.15 0.18 -1.25
-0.12 0.38 -0.41 0.57 0.18 0.3 0.95 -0.4 0.62 0.61 0.29 0.51 0.65 -0.29 -0.61 -0.74 -1.76 0.93 0.68 -0.88 -0.17 0.15 -0.54 -0.85 -1.78 -2.11 -2.15 -0.69 -0.36 -0.84 -1.27 -0.38 0.61 1.28 -0.56
0.42 0.86 0.72 0.41 0.38 0.78 0.47 -0.03 0.38 0.86 -0.74 -0.13 - -1.28 -0.79 -1.32 -1.59 0.62 0.44 -0.16 0.59 1.31 -0.15 -0.15 -1.85 - - -0.3 -0.8 0.31 0.1 0.22 -0.43 0.34 -1.23
0.76 0.9 0.53 0.54 -0.4 0.92 1.03 0.76 0.72 1.05 -0.77 -0.45 -1.74 -1.87 -0.37 -0.82 -1.0 0.08 0.89 -2.29 -0.85 0.28 -1.17 -0.45 -3.01 -1.23 -0.94 0.07 -0.52 0.33 -0.64 0.88 -0.29 -0.56 -0.69
0.14 0.7 -0.04 0.67 -0.46 0.48 0.74 -0.51 0.44 0.47 0.49 0.35 -0.4 -0.88 0.16 0.1 -0.68 -0.14 0.77 -0.88 -0.15 0.48 -0.64 -1.0 -2.18 -0.51 -1.15 0.76 -0.96 -0.62 -0.28 -0.92 0.43 0.34 -0.16
0.36 0.54 0.17 0.42 0.21 0.72 0.44 0.0 0.77 0.72 -0.08 0.14 -1.21 -1.07 0.07 0.02 -0.76 0.25 0.79 -0.16 -0.14 0.26 -0.61 -0.5 -1.05 -2.19 -2.89 0.15 -0.81 -0.73 -0.95 -0.43 0.37 0.19 0.67
-0.56 -0.44 -0.49 -0.32 0.55 0.8 -0.17 -1.03 0.96 0.67 0.06 -0.37 -0.3 -1.41 1.3 0.98 1.51 0.67 0.98 0.58 -2.8 -1.07 -1.81 0.66 -0.12 -3.1 -3.37 -1.81 -1.04 -0.26 0.67 -3.63 0.31 -1.47 -3.22
0.44 0.46 0.06 0.33 0.55 0.91 0.44 -0.21 0.75 0.73 0.11 -0.02 -0.22 0.49 -0.59 -0.52 -2.33 0.51 0.57 -0.88 -0.21 0.32 0.18 0.02 -1.11 -1.89 -3.04 0.19 -0.58 -0.53 -0.51 -0.37 0.27 -0.66 -0.33
0.75 1.52 0.14 1.11 0.25 1.16 1.25 0.07 1.12 1.16 -1.27 -1.25 -0.18 -2.53 -0.34 -0.77 0.13 -0.56 -0.41 -1.5 -0.07 0.38 -0.29 0.58 -0.84 -1.56 -2.36 -0.16 -1.38 -0.97 -0.27 -1.99 -1.28 -1.72 -0.96
0.6 1.57 0.79 1.32 -0.27 1.0 1.35 0.11 0.83 1.33 -0.62 -0.49 -1.83 -2.83 -0.84 -1.12 0.17 -0.34 -0.01 -0.07 -1.6 0.56 -1.89 -0.04 -1.97 -0.96 -1.41 -1.43 -2.63 -0.49 -0.09 -1.92 0.01 0.23 -4.04
1.02 0.5 0.25 -0.03 0.05 1.49 0.42 0.32 1.03 0.84 -1.17 -1.55 -1.84 -1.76 0.6 -0.63 0.0 0.69 1.24 -1.43 -0.42 0.03 -1.01 0.13 -1.76 -2.09 -2.31 -0.32 -1.24 0.5 0.35 0.49 -1.03 -2.64 -2.44
0.23 0.16 -0.34 -0.06 -0.03 0.73 0.41 -0.03 0.75 0.57 -0.19 -0.42 0.14 -1.05 -0.35 -0.97 -0.31 0.14 0.4 -0.38 -0.15 -0.47 -0.36 0.24 -0.58 -1.39 0.49 -0.32 -0.03 -0.04 -0.33 0.19 0.0 0.33 0.44

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.