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Heatmap: Cluster_2 (HCCA)

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(Showing raw values)

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Gene
4h after treatment
4h after treatment,No nitrate
8h after treatment
8h after treatment,No nitrate
20C
20h after treatment
20h after treatment,No nitrate
20h after treatment,Nocodazole added
36h after treatment
36h after treatment,No phosphate
Blue light,10min after light change
Blue light,60min after light change
Bohlin
CCAP1055/1,20C
CCAP1055/1,20C,High CO2,OligoDT primed
CCAP1055/1,20C,Low CO2,OligoDT primed
CCAP1055/1,20C,Normal CO2,OligoDT primed
CCMP2561
CCMP2561 Nitrase Reductase Knockout
CCMP632
CCMP632,24h
CCMP632,48h
CCMP632,72h
CCMP632,High light acclimated WT
CCMP632,Low light acclimated WT
NEPCC640,8h,1000ppmv CO2
NEPCC640,8h,390 ppmv CO2
No light,8h after treatment
Pt-1
Pt-1 8.6
Pt-1 8.6,With nitrogen
Pt-1 8.6,Without nitrogen
Red light,0min before light change
UTEX 646,Blue light
UTEX 646,No light
16.79 34.35 41.27 61.37 11.31 30.87 27.76 183.98 13.35 25.54 11.71 17.53 12.57 39.49 24.95 40.1 4.49 22.37 21.17 3.59 12.79 17.28 9.66 6.91 4.25 12.6 1.92 5.02 2.13 7.8 17.74 3.7 14.4 0.63 0.41
0.0 0.0 0.6 0.0 0.83 0.65 0.0 12.62 0.0 0.0 0.0 0.0 0.0 0.0 0.85 0.0 0.0 0.32 0.04 0.0 0.27 0.0 0.0 0.68 0.0 1.37 0.0 0.66 0.0 0.26 1.03 0.0 0.0 0.0 0.0
34.13 72.71 77.49 99.87 32.31 59.6 36.89 890.98 19.63 39.17 5.24 7.42 5.06 6.69 30.11 46.55 48.82 22.39 21.84 8.24 41.93 69.29 10.26 18.28 7.06 44.25 1.94 7.0 7.81 48.07 62.69 18.33 6.85 0.47 0.9
37.2 61.82 46.1 86.9 34.42 48.08 65.85 447.82 39.05 59.18 31.46 30.93 8.64 13.55 23.35 42.54 20.81 46.35 30.15 12.11 34.78 50.79 23.6 17.55 10.36 30.35 6.23 22.32 10.24 27.59 32.95 23.99 27.27 10.21 6.25
94.68 102.75 379.78 174.59 23.0 53.32 31.64 2442.97 31.07 36.29 26.29 26.28 260.64 24.67 78.98 94.33 82.17 43.83 129.88 8.98 319.48 338.15 48.24 22.26 4.52 48.02 0.96 22.21 38.6 32.97 51.71 19.57 33.96 169.91 8.39
41.23 76.76 91.77 140.2 51.25 72.84 76.31 1375.76 34.13 64.82 23.28 29.68 16.65 65.66 44.0 76.35 33.44 56.54 26.68 11.7 109.8 116.82 54.68 46.87 18.5 46.76 1.44 18.38 9.46 50.32 79.18 34.84 25.16 11.74 4.82
66.97 138.86 135.47 191.72 122.74 107.52 127.72 1291.81 122.68 134.29 20.64 24.55 149.66 33.19 63.47 108.95 81.66 59.02 44.03 85.77 100.01 100.06 86.05 76.81 77.93 114.09 35.6 55.42 49.1 78.87 101.07 55.22 26.23 8.85 123.44
7.1 12.77 12.19 19.96 11.78 13.96 10.75 65.0 8.45 10.8 21.77 26.2 14.42 25.39 8.34 12.39 3.45 11.61 6.64 7.88 8.85 18.9 6.07 4.36 1.44 3.53 0.99 5.3 5.85 8.9 10.07 5.45 26.27 9.61 13.65
55.4 112.02 124.22 127.4 41.17 79.5 57.13 593.39 35.96 67.04 22.23 22.05 10.11 8.39 45.66 71.82 79.7 51.18 43.36 31.42 41.68 71.3 20.85 32.6 11.45 58.89 4.91 7.41 18.43 58.16 108.9 10.28 26.99 30.87 0.46
7.41 22.58 14.79 28.73 4.27 11.37 26.82 193.38 4.66 7.94 3.35 2.92 1.45 3.35 2.33 3.99 0.92 7.97 4.99 1.08 2.28 4.65 1.21 3.03 0.64 1.73 1.0 1.39 0.74 2.47 2.64 2.82 2.75 0.27 2.67
791.61 1451.34 1094.01 1301.36 611.52 751.27 706.94 5545.18 277.74 758.5 163.91 214.83 167.32 151.77 591.19 858.03 1019.62 609.81 407.99 934.14 240.5 455.77 101.61 441.39 216.58 1123.22 192.72 60.72 402.03 691.36 1134.88 422.77 207.56 159.24 7.58
60.47 92.59 77.71 118.35 32.22 78.03 108.14 386.23 79.66 97.37 17.82 21.68 20.76 20.4 37.72 35.63 14.15 108.59 74.24 20.4 33.17 43.59 23.24 23.95 8.8 21.77 17.95 21.54 17.6 21.77 19.43 22.79 21.14 33.5 7.53
48.97 60.33 60.92 78.39 16.74 49.58 63.52 303.45 47.27 54.75 22.85 27.42 16.36 24.27 26.18 25.97 16.18 39.31 41.03 14.99 21.7 32.22 15.66 19.58 3.7 22.53 20.73 17.22 17.06 11.73 11.67 10.32 26.34 52.27 29.87
108.9 267.9 266.06 461.64 130.17 180.65 206.67 2676.84 73.16 166.99 11.42 21.8 2.98 13.11 85.32 165.08 51.55 78.99 28.26 35.82 92.28 134.44 48.08 42.42 23.48 151.45 3.71 24.17 19.35 107.38 126.79 96.13 17.28 2.63 0.65
42.68 103.16 119.85 183.02 84.04 72.83 98.49 807.37 35.66 74.61 11.44 16.46 1.35 1.15 218.02 350.52 182.98 109.17 30.56 151.71 8.51 43.95 5.55 13.49 5.42 68.16 0.38 10.01 24.16 28.92 38.14 34.48 15.34 5.85 0.37
81.67 185.55 218.69 306.96 203.8 140.43 163.21 2129.83 60.07 154.61 22.74 57.04 0.84 80.85 668.39 910.32 407.31 410.46 120.33 29.29 222.57 331.69 165.8 60.42 37.8 137.77 3.54 17.36 30.03 150.66 149.92 161.82 45.69 0.0 0.05
5.42 14.01 9.86 17.19 10.55 8.84 12.59 55.21 6.25 10.61 9.48 13.78 18.33 7.36 3.01 6.33 2.62 3.66 2.88 3.38 9.4 21.24 7.9 5.27 1.5 2.84 0.54 5.5 3.48 6.12 7.25 5.17 13.76 5.09 5.99
5.42 14.01 9.86 17.19 10.55 8.84 12.59 55.21 6.25 10.61 9.48 13.78 18.33 7.36 3.01 6.33 2.62 3.66 2.88 3.38 9.4 21.24 7.9 5.27 1.5 2.84 0.54 5.5 3.48 6.12 7.25 5.17 13.76 5.09 5.99
0.0 0.0 0.0 0.0 0.5 0.0 0.76 3.53 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.72 0.0 0.0 0.0 0.7 0.0 0.0 0.0 0.0 0.0 0.0 0.0
181.04 514.64 380.29 540.33 46.46 261.33 204.07 2124.58 93.71 143.76 40.82 50.18 55.12 34.32 19.44 32.81 22.86 31.0 16.51 9.12 15.4 139.14 4.28 29.6 1.74 37.94 1.21 21.08 2.64 23.47 53.11 9.45 61.08 0.19 0.15
74.12 176.86 121.93 198.28 88.32 119.83 98.66 911.59 43.98 105.4 35.74 48.89 7.8 18.93 123.58 194.31 108.1 91.92 43.8 36.31 100.17 117.04 36.96 39.97 26.99 42.41 2.25 15.81 12.13 74.47 91.83 63.48 53.18 16.02 11.21
140.84 366.17 338.41 560.75 188.54 251.22 280.13 1701.28 112.51 246.56 43.51 65.29 33.83 97.03 207.55 478.05 88.4 279.46 109.82 98.29 89.09 179.85 114.12 74.15 54.84 95.67 2.78 34.21 34.1 142.64 172.84 154.66 61.44 1.3 2.25
6.0 9.47 10.34 14.21 7.42 7.55 8.67 40.11 4.98 7.76 10.34 10.96 5.82 5.77 2.29 4.0 0.5 7.31 4.47 1.5 2.67 8.12 1.96 4.36 1.45 3.37 6.16 3.12 2.0 5.14 4.07 3.24 11.36 1.62 3.72
479.28 929.31 625.06 1011.64 313.06 551.64 617.54 5525.26 280.17 495.13 247.96 337.48 205.05 184.03 188.49 464.2 147.49 398.87 289.75 151.4 396.74 605.34 271.39 179.96 95.72 281.54 56.09 169.99 189.63 325.49 387.37 364.69 305.18 191.21 54.99
17.19 36.51 36.25 61.12 25.61 28.04 26.91 483.8 10.69 24.55 10.06 12.98 2.86 4.79 29.88 35.49 36.12 17.88 8.28 7.98 16.42 34.31 8.51 11.45 4.54 25.56 1.6 3.31 2.48 29.38 40.99 17.54 12.78 1.46 0.08
26.67 21.83 41.09 33.85 13.04 23.98 13.37 248.45 7.08 15.48 10.22 11.72 5.58 7.66 33.4 36.94 12.2 18.27 8.98 9.96 31.88 42.99 15.8 19.83 5.39 23.75 12.97 2.88 6.6 19.8 32.29 8.5 9.26 30.46 0.6
41.76 74.97 67.49 162.33 31.09 61.59 131.41 650.19 64.72 95.3 1.65 1.5 0.39 68.65 1.05 13.62 0.58 95.46 12.86 4.24 52.37 28.66 74.2 2.75 2.7 0.25 0.71 60.19 23.95 7.94 5.83 9.22 1.88 0.3 0.2
83.93 215.79 142.23 255.99 69.15 123.06 207.12 899.85 174.09 196.54 59.28 69.41 70.32 39.01 48.63 116.01 18.32 137.02 98.18 63.01 62.89 66.09 57.6 72.3 44.13 87.48 14.12 88.96 60.28 45.18 58.16 42.52 86.18 96.64 110.63
1.97 4.6 3.12 5.06 2.26 3.68 2.47 18.14 2.08 2.45 1.63 1.52 0.29 2.31 0.42 0.56 0.16 0.94 1.02 0.33 2.7 4.97 0.39 3.23 0.41 0.79 1.84 0.91 0.82 1.97 2.29 1.43 1.68 0.93 0.82
128.64 265.09 333.5 457.98 363.0 248.54 193.91 5163.71 88.55 256.49 118.95 163.06 137.12 67.89 775.58 798.76 1516.04 323.39 131.35 264.63 58.59 245.84 23.95 155.02 138.04 414.07 24.74 20.3 68.04 458.47 615.95 336.83 154.39 2.68 3.17
508.34 1218.6 1372.09 2160.48 647.29 883.1 882.86 17926.4 300.6 717.38 76.85 104.45 185.3 50.53 1277.53 1502.16 3027.28 733.35 336.53 227.33 74.46 185.16 21.66 258.23 223.0 1747.36 50.11 84.01 135.3 670.47 1114.2 348.23 107.39 3.41 5.52
791.02 1846.93 2034.81 3384.1 1384.53 1377.12 1617.69 26647.7 556.65 1335.67 346.75 470.44 764.54 257.95 1585.31 2147.64 3820.15 639.89 273.2 518.53 700.72 1327.88 252.44 843.93 640.99 4450.19 122.76 174.27 416.64 2038.6 2913.43 1460.87 455.03 10.96 8.62
666.16 1635.65 1849.36 3020.51 1159.53 1214.34 1413.34 17400.53 475.52 1096.32 363.46 476.4 434.03 323.06 1612.65 2010.26 3902.14 583.75 268.38 420.94 281.68 642.18 125.1 857.91 603.14 1262.39 30.82 127.19 283.94 1707.92 2711.29 1143.23 465.6 16.54 13.21
57.0 83.95 177.89 160.4 27.55 110.9 28.21 2648.7 32.3 27.73 13.19 16.81 6.69 32.84 31.81 52.56 65.32 151.14 28.58 12.67 1.5 4.51 0.36 357.38 4.6 6.91 0.06 15.61 33.28 7.56 3.67 2.52 19.31 1.55 1.73
4.77 7.12 8.41 8.58 3.76 6.97 6.6 59.61 4.91 5.62 9.46 8.52 6.32 1.57 1.5 1.55 1.76 1.99 3.59 1.29 5.44 4.6 3.04 0.89 0.38 0.03 0.0 4.44 2.73 1.04 1.08 0.81 8.68 2.57 2.92
67.52 121.52 150.63 238.62 74.52 122.3 110.59 2187.56 56.56 93.74 26.73 39.61 17.01 17.74 49.96 64.73 59.26 47.56 22.48 31.54 61.05 77.93 108.88 49.89 16.81 67.38 10.68 23.51 19.98 53.12 48.34 40.34 37.08 7.69 5.12
15.82 31.09 28.27 56.84 30.59 18.46 35.22 264.88 6.91 14.07 8.44 14.8 6.07 13.8 13.11 19.9 8.95 38.84 19.36 22.01 30.16 54.4 9.31 30.0 12.37 41.64 12.21 8.86 10.11 64.77 59.19 77.36 12.26 11.92 12.9
16.26 29.51 29.13 62.13 31.28 25.47 29.81 245.21 14.19 23.09 23.8 33.47 9.1 13.27 37.37 47.12 32.83 29.11 18.78 13.25 21.13 40.38 23.2 16.51 10.0 59.31 2.99 7.97 4.75 25.21 32.1 20.5 28.06 1.51 0.75
65.48 133.16 144.08 188.36 59.21 103.02 68.44 1601.13 34.09 68.86 20.8 28.0 10.1 13.93 69.36 123.99 46.89 60.61 31.01 13.47 73.04 121.29 37.31 32.32 10.59 62.35 1.77 14.27 6.86 57.87 75.69 27.56 23.78 1.08 1.47
23.1 43.67 40.79 61.49 19.76 32.19 41.97 150.93 19.32 32.63 9.39 13.27 10.0 8.02 23.93 32.95 30.39 26.83 21.23 13.26 5.63 23.46 3.48 12.96 2.91 35.38 8.67 7.47 5.96 27.35 30.26 29.05 13.11 26.11 13.92
73.97 112.17 75.06 113.11 44.07 78.46 83.43 493.96 41.5 37.11 29.55 44.51 11.08 16.78 34.96 37.63 45.66 53.82 63.01 10.96 22.23 55.08 15.93 60.38 23.51 8.44 10.99 15.75 11.6 57.86 111.35 41.07 37.47 18.59 0.45
454.32 1060.37 1041.28 1474.28 496.32 710.82 776.13 4447.61 288.24 651.17 99.67 147.99 137.94 80.94 1224.78 1478.36 1634.82 819.01 397.4 111.05 141.41 211.67 121.26 217.03 121.2 744.58 30.52 69.66 98.96 388.37 572.74 313.1 137.06 2.66 2.04
42.97 102.76 75.97 105.14 56.35 73.92 56.82 556.21 39.5 68.09 27.01 40.18 5.02 11.55 59.48 91.43 33.91 50.73 26.44 11.75 50.04 59.86 28.0 27.34 10.23 45.42 2.94 14.03 5.69 55.69 76.29 36.99 36.4 8.72 1.88
22.95 44.84 46.85 84.25 13.78 34.11 39.57 204.56 17.84 32.32 1.36 2.32 1.55 2.6 19.74 33.84 17.02 19.49 5.96 3.57 7.58 15.36 7.33 8.12 5.96 4.19 0.46 5.61 3.09 10.45 17.45 5.49 2.14 0.08 0.05
4.65 7.89 13.21 10.57 4.59 6.26 6.02 132.5 3.97 5.12 6.18 6.09 4.77 8.68 3.8 3.93 3.69 12.99 17.8 2.25 21.04 49.44 6.25 4.35 0.99 2.54 0.89 2.5 5.06 11.44 10.52 8.07 7.27 11.78 11.14
42.0 86.61 92.67 146.43 47.65 64.78 129.68 620.3 78.33 91.27 19.09 25.97 62.79 62.45 63.21 95.65 44.85 119.59 104.18 17.49 28.01 49.59 16.64 49.13 10.61 42.68 4.62 12.36 24.05 86.85 56.67 112.26 24.25 95.42 63.31
67.37 129.72 96.1 148.14 73.94 110.1 113.29 711.65 99.08 116.32 48.15 59.7 44.47 26.31 62.67 88.13 48.26 97.48 96.2 66.62 78.59 93.36 46.3 47.18 26.16 49.84 38.69 39.28 36.04 64.86 87.23 47.18 54.06 89.33 29.38
36.67 83.01 68.6 132.26 58.22 56.74 106.5 625.13 46.36 73.18 81.34 116.07 130.8 266.77 40.97 46.31 49.92 69.81 69.89 46.79 32.85 78.62 29.44 71.68 30.5 116.4 13.32 21.76 66.55 115.36 78.6 170.11 103.55 68.42 76.01
18.41 37.34 27.6 56.73 15.46 22.68 39.57 202.18 19.21 23.82 4.95 9.82 9.05 6.69 13.52 24.78 8.89 34.67 24.74 8.06 15.01 23.26 12.8 10.86 4.01 27.76 1.19 6.05 5.19 14.22 20.55 13.87 7.8 8.32 0.27
137.51 329.42 311.82 432.93 100.81 234.16 184.75 4287.1 85.55 176.23 14.84 22.57 14.59 3.8 79.84 130.24 149.14 104.17 85.14 22.5 25.4 56.88 8.09 126.99 31.09 59.42 3.71 19.45 18.59 198.86 378.51 89.89 20.95 8.19 0.55
137.51 329.42 311.82 432.93 100.81 234.16 184.75 4287.1 85.55 176.23 14.84 22.57 14.59 3.8 79.84 130.24 149.14 104.17 85.14 22.5 25.4 56.88 8.09 126.99 31.09 59.42 3.71 19.45 18.59 198.86 378.51 89.89 20.95 8.19 0.55
25.61 45.66 42.24 24.2 5.45 18.69 3.73 454.75 3.14 5.08 5.37 7.2 0.03 7.22 5.84 9.98 0.52 10.67 3.57 3.38 0.71 2.06 0.55 22.86 0.27 4.66 0.33 2.56 2.75 0.44 0.44 0.08 6.72 0.56 2.67
8.42 24.28 20.7 28.11 3.69 17.15 9.98 101.48 6.46 11.05 5.71 6.03 9.34 1.72 4.48 10.42 2.7 7.44 4.53 2.04 2.61 4.9 1.32 2.65 0.68 3.6 1.62 1.0 0.77 2.95 3.91 1.97 6.15 1.89 3.63
284.72 761.3 591.17 887.64 179.12 372.01 404.55 2450.49 107.97 326.84 112.79 220.99 23.2 161.73 382.45 540.28 418.38 273.16 132.64 32.78 177.27 354.87 105.62 112.52 29.07 267.0 6.08 28.63 18.65 142.92 194.05 178.34 167.08 2.04 1.02
27.8 48.46 57.86 66.3 7.16 32.4 32.16 293.74 13.6 33.44 16.13 21.05 3.92 13.99 15.2 7.15 21.73 23.34 42.43 2.02 8.26 34.42 5.67 24.28 5.82 4.77 3.91 4.54 2.57 8.99 13.31 5.92 24.12 43.27 4.18
40.18 79.49 101.48 152.16 102.45 57.96 81.52 741.54 34.04 60.33 30.57 40.69 27.53 50.46 53.91 68.29 106.22 35.48 30.83 28.01 12.75 55.22 11.76 86.44 41.55 79.54 2.94 14.69 33.42 98.54 134.81 60.86 40.03 14.31 11.64
129.42 372.01 204.86 391.55 156.21 187.1 250.21 1521.16 84.15 195.41 66.2 99.18 49.44 55.97 192.99 318.97 212.96 187.74 149.18 84.61 153.27 239.88 72.45 73.59 40.74 139.98 4.4 29.22 28.58 193.28 248.49 176.84 96.31 21.34 23.29

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)