Heatmap: Cluster_88 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
4h after treatment
4h after treatment,No nitrate
8h after treatment
8h after treatment,No nitrate
20C
20h after treatment
20h after treatment,No nitrate
20h after treatment,Nocodazole added
36h after treatment
36h after treatment,No phosphate
Blue light,10min after light change
Blue light,60min after light change
Bohlin
CCAP1055/1,20C
CCAP1055/1,20C,High CO2,OligoDT primed
CCAP1055/1,20C,Low CO2,OligoDT primed
CCAP1055/1,20C,Normal CO2,OligoDT primed
CCMP2561
CCMP2561 Nitrase Reductase Knockout
CCMP632
CCMP632,24h
CCMP632,48h
CCMP632,72h
CCMP632,High light acclimated WT
CCMP632,Low light acclimated WT
NEPCC640,8h,1000ppmv CO2
NEPCC640,8h,390 ppmv CO2
No light,8h after treatment
Pt-1
Pt-1 8.6
Pt-1 8.6,With nitrogen
Pt-1 8.6,Without nitrogen
Red light,0min before light change
UTEX 646,Blue light
UTEX 646,No light
-0.46 -0.44 -0.24 -0.19 -0.84 -0.2 -0.09 -0.15 0.14 0.31 -0.13 0.18 -0.32 1.27 -1.19 -1.18 -1.42 -1.28 -0.93 -0.15 -0.01 0.05 -0.33 0.47 -0.06 0.52 0.35 -0.69 0.24 1.13 0.65 1.21 -0.01 -1.05 -0.67
-1.1 -0.3 -1.13 -0.48 -0.84 -0.99 -0.07 -0.61 -0.52 -0.47 0.38 0.2 -1.19 0.26 -1.03 -1.34 -2.14 -0.37 0.93 -2.06 0.49 1.01 -0.62 0.18 -0.5 0.67 0.8 0.89 0.49 0.4 -0.25 0.9 0.64 0.46 -0.24
-0.9 -0.76 -0.98 -0.96 -1.27 -0.65 -0.79 -0.5 -0.87 -0.91 -1.07 -0.58 -0.68 -1.14 -2.07 -2.76 -2.03 -1.07 -1.08 -1.39 -2.53 -1.57 -2.82 0.18 -1.34 1.4 2.94 -1.77 -0.18 0.93 1.55 1.08 -0.57 1.16 0.8
-0.9 -0.11 -0.89 0.09 -0.84 -0.36 0.38 -0.2 -0.25 -0.09 -0.9 -0.84 -0.58 -0.67 -2.4 -1.3 -4.39 -0.11 0.26 -0.23 -3.07 -1.41 -2.97 -0.35 -0.95 0.92 2.0 0.23 0.87 1.33 1.28 1.32 -0.84 -0.76 0.29
-1.05 -0.9 -1.03 -0.93 -0.7 -0.21 -0.93 -0.67 -0.25 -0.55 -1.46 -1.48 -0.32 -1.17 -0.53 -0.64 -2.01 -0.42 -0.39 1.03 -1.97 -1.55 -1.51 -0.16 0.28 1.79 2.32 -0.42 0.39 0.58 1.34 -0.6 -1.32 -0.14 1.11
-1.52 -1.51 -1.27 -1.76 -1.81 -1.21 -2.71 0.21 -1.59 -1.92 0.28 -1.03 1.14 -0.89 -2.45 -2.19 -3.4 -1.42 -0.15 -1.71 1.6 1.15 0.38 -0.48 -1.41 0.89 2.85 -1.07 0.18 0.42 0.97 -1.33 -1.41 0.19 -0.15
-0.38 -0.09 -0.22 0.08 -0.26 0.11 0.49 0.39 0.16 0.16 -0.16 -0.0 0.53 0.85 -1.49 -1.69 -2.35 -1.19 0.33 -1.63 -0.29 -0.1 -1.01 0.23 -0.13 0.32 0.96 0.23 0.41 0.11 -0.06 -0.23 -0.12 0.22 0.57
0.41 -0.07 0.66 0.02 0.33 0.37 -0.34 0.29 0.1 0.23 0.93 0.41 -3.43 -0.31 -0.85 -1.61 -0.63 -0.7 0.09 0.45 -2.49 -0.28 -2.79 0.28 -1.79 -1.93 -1.24 0.33 0.51 0.33 0.13 0.57 -0.12 1.23 0.58
-0.7 -0.26 -1.04 -0.09 -1.45 -0.17 -0.03 -0.45 -0.17 -0.42 -3.2 -2.82 -1.36 -1.82 -2.95 -2.45 -2.0 -0.06 0.44 0.62 0.11 -0.67 -2.77 -0.03 -0.95 1.25 2.93 -0.73 -0.89 1.51 1.52 0.14 -2.83 -1.63 -1.2
-1.16 -0.63 -1.3 -0.73 -0.99 -0.81 -0.33 -1.03 -0.58 -0.61 -0.79 -0.73 -0.16 -0.42 -1.08 -1.88 -0.86 -0.38 0.12 0.49 -2.84 -1.87 -2.21 -0.32 -0.77 1.29 3.08 -1.5 -0.01 1.03 0.84 0.3 -0.75 -0.26 0.11
-0.9 -0.77 -1.05 -0.69 -0.34 -0.37 -0.47 -0.82 -0.07 -0.2 -0.16 -0.01 -1.16 0.23 -1.4 -1.01 -4.22 -0.41 -0.28 -0.59 0.91 0.5 1.35 -0.13 0.41 -0.23 1.91 0.22 -0.5 -0.26 0.04 -1.0 -0.11 -0.46 1.5
-1.18 -0.51 -1.17 -0.43 -0.44 -0.76 0.07 -1.26 -0.1 -0.17 0.99 0.38 1.04 0.98 -0.5 -1.13 -0.04 -0.82 -0.55 0.03 -2.35 -0.92 -1.72 0.3 0.66 -1.13 -0.45 0.04 0.06 0.91 0.49 0.62 0.16 0.43 0.95
-1.91 -1.02 -1.62 -1.53 -1.41 -1.46 -1.27 -0.98 -1.72 -1.21 0.46 0.7 -1.28 1.31 -3.77 -2.03 -4.72 -1.18 0.07 0.93 0.29 1.2 -0.59 0.27 -1.2 0.56 1.79 -2.57 0.1 0.64 0.97 0.17 0.7 0.33 1.0
-1.11 -0.88 -0.99 -0.82 -0.72 -1.11 -0.44 0.25 -0.81 -0.79 0.56 -0.14 -0.75 0.14 -1.51 -1.44 -2.41 -0.86 -0.3 0.11 -1.86 -0.18 -2.77 -0.01 -1.41 -0.04 1.81 0.53 0.53 1.13 1.23 0.77 -0.28 0.47 1.51
-1.68 -1.15 -1.69 -1.09 -0.82 -1.37 -0.61 -1.36 -0.91 -0.84 0.58 -0.16 -0.29 0.63 -2.22 -1.7 -1.34 -1.04 -0.52 -0.82 0.48 0.35 0.34 0.31 0.64 0.32 1.78 -0.01 0.73 0.88 0.97 0.41 -0.14 -0.32 1.03
-1.12 -0.54 -2.11 0.35 -0.78 0.04 - 0.17 -0.14 -1.28 -1.21 -0.99 - -2.45 -2.55 -0.35 -2.92 -2.43 -1.86 1.74 -1.51 -0.87 -1.08 1.79 0.37 -0.66 0.5 0.51 0.88 1.15 0.61 -1.48 -0.7 -0.43 2.43
-2.0 -1.31 0.06 -0.6 -1.13 -0.91 -0.64 0.87 -1.26 -0.88 -1.5 -1.2 -0.7 1.07 -3.52 -2.28 -4.03 -1.96 0.2 -0.3 1.29 0.95 -0.97 0.41 -2.08 0.54 2.36 -1.13 0.8 0.89 1.2 -0.08 -1.33 -0.77 -0.26
-1.1 -1.18 -1.12 -0.96 -0.54 -0.72 -0.62 -0.78 -0.72 -0.78 0.1 -0.32 0.03 1.8 -1.6 -2.1 -0.95 -1.14 0.44 0.16 -0.55 -0.89 -1.31 0.68 0.72 -0.16 1.61 -0.4 0.66 0.64 0.72 0.25 -0.64 0.61 0.37
0.33 0.2 0.27 0.0 -0.14 0.42 0.02 0.54 0.21 0.51 -0.35 -0.0 -1.09 0.5 -1.68 -0.6 -2.17 -0.28 0.05 -0.3 0.11 0.29 0.67 0.05 -0.44 -1.98 -1.39 0.81 0.56 0.26 -0.02 0.69 -0.17 0.1 -1.88
-0.32 -1.17 -0.5 -1.78 -0.7 -0.91 -2.59 -0.87 -0.78 -0.89 0.83 0.76 -1.37 -2.93 -0.67 -0.71 -1.17 -2.34 -1.88 -0.66 0.45 -0.02 0.22 0.49 0.78 -0.35 -1.05 1.96 0.68 1.27 1.78 -2.56 -0.0 0.84 -0.33
-0.92 -0.49 -0.9 -0.6 -1.12 -0.56 -0.53 -0.36 -0.52 -0.34 1.21 0.64 -0.3 -0.31 -1.41 -0.84 -1.97 -0.27 0.37 -0.32 -3.03 -1.02 -3.32 0.3 -0.96 -0.45 0.72 0.27 0.38 1.43 1.5 0.58 0.19 0.5 0.95
-0.83 -0.55 -0.53 -0.37 -0.87 -0.58 -0.46 0.25 -0.23 -0.06 -0.27 0.12 0.26 1.26 -1.0 -1.0 -0.82 -0.32 0.55 0.36 -0.54 -0.01 -0.93 0.37 -0.16 1.15 0.68 -0.52 0.15 0.41 0.5 0.06 0.15 -0.46 0.12
-1.14 -0.66 -0.59 -0.0 -0.49 -0.76 0.08 -0.8 0.01 -0.09 -0.0 -0.21 0.11 -0.63 -1.23 -1.08 -0.72 -0.68 -0.29 0.47 -1.61 -1.1 -1.17 0.25 0.35 0.43 1.54 0.19 0.87 1.2 1.19 0.38 -0.22 -0.59 0.17
-1.17 -0.81 -0.92 -0.41 0.11 -0.44 -0.05 -0.35 0.22 0.07 -0.06 -0.54 -0.83 -0.56 -0.47 -0.89 -1.05 -0.27 -0.09 0.99 -0.91 -0.67 -0.58 0.63 -0.55 0.06 1.05 0.48 -0.28 1.42 1.11 0.72 -0.78 0.34 -0.3
-0.77 -0.55 -0.66 -0.47 -0.97 -0.79 -0.73 -0.19 -0.49 -0.7 2.04 0.75 -0.17 -1.82 -1.13 -0.85 -0.83 -1.01 -0.85 -0.39 -1.71 -0.78 -1.89 -0.76 -0.6 0.53 1.38 0.75 0.61 0.31 0.51 -0.99 0.48 0.6 1.26
-0.44 0.09 -0.09 0.2 -1.74 0.54 0.21 0.92 1.01 0.37 -0.92 -1.26 -2.28 -0.5 -2.75 -2.48 -3.16 -0.97 0.04 0.89 -1.05 -0.57 -2.11 0.56 -1.76 -1.36 -1.31 1.01 1.19 1.39 0.69 0.45 -1.28 -1.0 1.35
-0.77 -0.0 -0.69 0.15 -0.59 -0.2 0.41 0.14 0.12 0.23 0.9 0.05 -0.42 0.08 -1.99 -1.6 -1.89 -0.67 -0.39 0.82 -1.92 -0.48 -1.72 0.76 -1.51 -1.68 -1.96 0.44 0.52 1.67 0.66 1.17 -0.17 -0.74 0.65
-0.5 -0.19 -0.75 -0.24 -0.86 -0.28 0.07 -0.78 0.0 -0.02 -0.06 -0.25 0.59 -1.4 -1.1 -0.96 -2.15 -0.67 -0.45 -0.26 0.31 -0.35 0.34 0.02 0.73 0.17 2.07 -0.09 -0.17 0.31 -0.04 0.23 -0.26 -0.6 0.91
-1.28 -0.94 -0.58 -0.36 -1.15 -0.99 -0.32 0.32 -0.66 -0.5 -0.31 -0.1 -1.53 1.43 -1.68 -1.13 -1.78 -1.03 -0.2 -0.75 0.2 0.17 -1.02 0.04 -1.48 0.49 2.27 -0.63 -0.1 0.63 1.0 -0.35 -0.31 -0.46 1.4
-1.72 -1.01 -0.91 -0.58 -0.61 -0.57 -0.53 -0.01 -0.29 -0.15 -0.77 -0.45 -0.42 0.81 -1.5 -1.24 -0.6 -0.76 0.09 -0.4 0.39 0.08 -0.58 0.27 -0.7 0.54 2.29 -0.89 1.02 0.5 0.54 -0.7 -0.43 -0.19 0.79
-0.73 -0.23 -0.48 0.02 -0.58 -0.35 0.05 0.07 -0.02 0.13 0.98 0.3 -0.15 -0.76 -1.21 -1.54 -1.2 -0.72 -0.84 -0.38 -1.29 -0.01 -0.68 0.28 -0.4 0.37 1.29 0.56 0.2 0.62 0.41 0.42 0.12 0.35 0.51
-0.29 -0.85 -0.51 -0.92 -0.5 -0.26 -1.06 -0.06 -0.41 -0.56 0.42 0.53 -0.35 -0.42 -0.5 -1.68 -0.7 -0.73 -0.4 -1.41 -0.32 0.14 -1.23 1.11 -0.63 -0.31 1.99 -1.18 -0.7 0.65 0.78 0.11 0.67 0.19 1.16
-2.47 -1.38 -2.07 -0.92 -0.58 -1.17 -0.48 -1.57 -0.65 -0.71 0.77 0.7 -0.32 1.16 -1.94 -1.31 -2.48 -1.09 -0.68 -0.52 -1.14 0.19 -0.38 0.09 0.7 0.96 2.1 -0.84 0.45 -0.19 -0.3 0.04 0.58 0.22 1.44
-0.63 -1.06 -0.9 -0.65 -0.45 -0.74 -1.17 -0.01 -0.94 -0.9 0.68 0.57 -1.62 -1.29 -1.41 -2.3 -0.95 -2.0 -1.59 0.01 -3.4 -1.35 -3.15 -0.12 -1.23 1.04 2.64 -0.46 0.11 1.02 0.95 0.39 0.62 0.45 1.11
-0.39 -0.3 -0.27 -0.4 0.08 -0.3 -0.45 -0.73 -0.27 -0.25 0.58 0.39 0.72 1.13 -0.6 -1.47 -0.1 -0.77 -0.49 -0.1 -4.0 -2.64 -3.13 0.52 0.52 0.14 0.14 0.3 0.4 0.03 0.66 -0.43 0.18 0.11 1.39
-1.79 -0.87 -1.59 -1.01 -0.65 -1.05 -0.53 0.51 -1.84 -1.49 1.47 0.57 -2.98 0.55 -2.14 -2.46 -2.94 -1.48 -1.35 -0.54 -0.51 0.76 -3.2 2.07 1.67 -2.09 -2.52 -3.3 -2.46 1.64 1.27 1.38 0.19 -0.41 0.02
-2.52 -1.84 -2.3 -1.45 -0.49 -1.04 -1.38 -0.88 -0.63 -1.08 -0.68 -1.04 -0.26 -0.37 -1.36 -2.04 -1.05 -1.84 -1.47 -0.2 0.32 -0.07 1.24 0.45 1.49 0.6 2.72 -0.48 -0.22 0.17 0.7 -1.22 -1.32 -2.34 1.68
-0.93 -0.33 -1.0 -0.29 -0.69 -0.28 -0.06 -0.1 0.07 -0.05 -1.59 -1.27 0.01 -1.56 -2.26 -1.57 -4.57 -0.19 -0.12 -1.14 -0.11 -0.44 -0.27 -0.24 -0.3 0.69 2.07 -0.24 0.92 1.2 1.7 0.4 -1.2 -0.2 0.28
-3.03 -2.32 -1.2 -1.43 -1.7 -1.42 -1.31 0.76 -2.32 -2.84 -3.51 -3.29 -2.3 -1.2 -3.95 -2.72 -5.38 -2.16 0.66 -1.42 1.29 0.63 -1.34 -0.0 -0.62 1.64 2.86 -2.41 0.63 1.49 2.25 -0.48 -3.41 -0.7 -1.39
-0.9 -0.49 -0.96 -0.53 -0.82 -0.6 -0.29 -0.46 -0.28 -0.29 -1.34 -1.11 0.53 -0.94 -0.99 -1.36 -0.84 -0.43 0.16 -0.07 -1.87 -1.03 -1.57 -0.51 -0.97 1.09 2.45 0.13 0.53 0.91 1.2 0.44 -0.84 -0.07 0.66
-0.78 -0.1 -1.05 -0.38 -0.93 -0.14 0.09 -0.74 0.02 0.1 -0.74 -0.38 -1.22 -0.39 -0.64 -0.91 -0.06 -0.38 -0.34 -0.6 -3.7 -2.17 -3.32 0.08 -0.49 0.66 1.86 0.62 0.83 1.13 1.85 0.21 -0.28 -0.49 -0.05
-1.61 -0.93 -1.2 -0.65 -0.94 -1.18 -0.57 0.77 -0.91 -0.74 -0.7 -0.98 0.08 -0.81 -1.73 -2.14 -1.34 -1.32 -1.18 0.08 -3.21 -1.81 -3.88 0.55 -0.34 1.05 2.53 -1.81 0.58 1.21 1.34 0.1 -1.01 0.51 1.51
-1.08 -0.64 -1.33 -0.75 -0.74 -0.98 -0.57 -0.08 -1.03 -0.98 1.69 0.53 0.09 0.87 -1.22 -0.85 -1.65 0.23 0.88 -0.36 -3.26 -1.27 -3.22 -0.36 -0.46 -0.89 0.62 0.88 -0.32 0.86 0.86 0.43 -0.01 0.95 0.82
-0.14 -0.41 -0.49 -0.52 -0.25 -0.2 -0.35 -0.29 -0.12 0.01 1.3 0.81 -1.53 -0.21 -0.67 -0.83 -1.64 -0.13 0.32 -0.22 -1.92 -0.63 -1.82 0.17 -0.17 -0.0 0.35 0.59 0.07 0.58 0.15 0.95 0.67 0.82 -0.28
-1.27 -0.33 -1.46 -0.35 -2.01 -1.47 0.03 -0.56 -1.29 -0.48 1.66 0.21 -0.17 0.52 -2.07 -1.08 -4.18 0.25 0.49 1.02 -1.79 -0.76 -1.99 -0.78 -1.03 -0.31 0.12 1.97 0.53 0.52 0.4 0.21 -0.05 -0.25 0.98
-1.45 -0.89 -0.93 -0.81 -0.84 -1.02 -0.32 -0.1 -0.99 -0.83 -0.67 -0.72 -0.13 1.35 -1.45 -0.94 -1.47 -0.53 0.71 -0.76 0.18 0.17 -0.95 0.76 0.05 -0.14 1.35 -0.4 0.83 1.0 0.78 0.88 -1.01 -0.08 0.84
-2.52 -1.8 -1.33 -1.59 -1.05 -1.66 -1.19 -0.79 -1.17 -0.7 0.57 0.93 0.63 1.62 -1.48 -1.15 -3.36 -0.47 -0.92 -0.02 -0.25 0.22 -1.06 0.97 0.23 -3.65 -4.89 -1.8 -0.34 1.48 0.57 1.92 1.02 0.68 0.34
0.07 -0.05 -1.22 -0.86 0.03 0.2 -0.7 -0.86 0.11 -0.71 0.77 0.53 -1.13 -1.13 -0.42 -1.5 -1.31 -0.87 -0.02 0.47 -0.7 -0.02 -0.53 0.52 -0.11 -0.31 0.75 0.49 -0.46 0.87 1.04 0.32 0.22 0.75 0.31
-0.73 -0.53 -0.88 -0.38 -0.22 -0.05 -0.32 -0.57 0.28 -0.27 -0.47 -0.47 -0.34 -0.63 -1.43 -1.22 -1.57 -0.96 -0.4 -0.61 -0.72 -0.98 -1.14 0.12 0.36 1.11 2.59 -0.1 -0.14 0.33 0.75 -0.46 -0.19 -0.48 0.91
-1.02 -0.94 -0.99 -1.12 -1.39 -0.69 -0.75 -0.67 -0.45 0.74 0.02 0.74 -1.14 0.44 -1.64 -1.83 -1.94 -0.63 -0.31 1.4 -1.71 -0.64 -2.15 -0.41 -2.45 1.14 2.75 -2.38 -0.25 -0.65 -0.74 -0.7 0.45 0.67 1.03
-1.04 -0.54 0.05 -0.11 -1.19 -0.41 -0.01 1.14 -0.43 -0.03 -0.25 0.14 -1.03 1.96 -4.0 -3.52 -3.63 -2.56 -1.31 -0.62 1.25 0.62 -1.27 0.67 -0.19 -0.43 1.09 -1.53 0.81 -0.08 -0.45 0.15 -0.27 0.31 0.44
-1.44 -1.03 -0.66 -0.5 -0.61 -0.94 -0.46 -0.8 -0.72 -0.7 -0.48 -1.55 -0.07 -0.45 -1.18 -0.45 -1.67 -0.19 -0.46 -0.75 -2.75 -1.68 -2.99 0.36 -0.57 1.2 2.46 -0.38 0.71 0.81 1.16 -0.08 -1.05 -0.29 1.88
-0.48 -0.05 -0.99 -0.21 -0.3 -0.54 -0.06 -1.3 0.03 0.06 1.67 0.15 0.49 0.59 -0.3 -0.18 -0.6 -0.23 1.13 -0.0 -0.68 0.25 -0.15 -0.31 -1.31 -0.5 -0.65 0.62 -0.07 -1.21 -1.41 -0.87 -0.22 0.78 0.8
-2.03 -1.74 -0.94 -1.14 -1.09 -1.01 -1.69 0.39 -0.86 -0.7 0.45 0.42 -0.34 2.03 -1.45 -1.57 -1.58 -1.21 -0.26 0.56 1.01 0.88 0.33 0.54 -0.99 -0.35 1.07 -1.61 0.78 0.43 0.56 -0.43 0.47 -0.56 -0.47
-0.08 -0.23 -0.13 -0.22 -1.06 -0.3 -0.96 -0.13 -0.38 -0.03 0.13 -0.96 -1.14 -3.14 -0.22 -0.35 -2.33 -0.61 -0.43 0.21 -2.23 -0.92 -3.65 0.14 -0.73 1.17 2.78 0.01 -0.47 0.74 1.17 -0.37 -0.9 0.31 -0.89
-0.97 -0.84 -0.75 -0.51 -1.59 -0.8 -0.52 0.21 -0.82 -0.52 1.18 0.83 -1.07 -0.58 -0.28 -0.69 0.58 -0.55 0.24 -1.06 -4.88 -1.75 -5.6 -0.69 -2.79 -0.08 1.66 -0.56 0.51 0.84 1.1 -0.02 0.82 1.25 0.81
-0.99 -0.74 -0.74 -0.97 -0.64 -0.74 -0.81 -0.3 -0.54 -0.41 1.9 1.11 -2.03 -0.76 -0.94 -1.59 -0.3 -1.67 -0.99 -0.76 -4.81 -2.52 -5.01 1.28 -0.57 -0.29 0.25 -0.76 0.27 1.15 1.19 -0.25 1.32 1.06 0.88
-0.94 -0.47 -0.84 -0.24 -0.73 -0.36 0.05 -0.3 -0.07 -0.12 1.17 0.66 -0.17 0.27 -1.89 -1.34 -3.38 -0.49 -0.22 0.51 0.39 0.48 0.29 -0.28 -1.02 -0.95 -1.2 -0.21 -0.5 0.98 0.42 1.15 0.69 0.47 0.34
-1.83 -1.56 -2.18 -1.91 -1.51 -1.6 -2.33 -0.76 -1.3 -1.74 0.67 -0.61 -1.5 -1.9 -0.67 -0.51 -0.83 -1.68 -1.52 -0.17 -0.87 -1.08 -1.56 0.43 0.45 0.98 1.41 -0.68 1.11 1.36 2.44 -1.32 -0.23 1.56 0.8

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.