Heatmap: Cluster_89 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
4h after treatment
4h after treatment,No nitrate
8h after treatment
8h after treatment,No nitrate
20C
20h after treatment
20h after treatment,No nitrate
20h after treatment,Nocodazole added
36h after treatment
36h after treatment,No phosphate
Blue light,10min after light change
Blue light,60min after light change
Bohlin
CCAP1055/1,20C
CCAP1055/1,20C,High CO2,OligoDT primed
CCAP1055/1,20C,Low CO2,OligoDT primed
CCAP1055/1,20C,Normal CO2,OligoDT primed
CCMP2561
CCMP2561 Nitrase Reductase Knockout
CCMP632
CCMP632,24h
CCMP632,48h
CCMP632,72h
CCMP632,High light acclimated WT
CCMP632,Low light acclimated WT
NEPCC640,8h,1000ppmv CO2
NEPCC640,8h,390 ppmv CO2
No light,8h after treatment
Pt-1
Pt-1 8.6
Pt-1 8.6,With nitrogen
Pt-1 8.6,Without nitrogen
Red light,0min before light change
UTEX 646,Blue light
UTEX 646,No light
0.07 0.43 -0.34 0.41 -0.02 0.3 0.86 -0.33 0.2 0.45 -0.2 -0.01 -1.21 -0.38 -1.95 -1.55 -3.07 -0.24 -0.02 -0.99 0.16 1.31 0.55 -0.01 -0.77 -0.82 -0.16 -0.75 -0.15 1.06 -0.02 0.93 0.09 0.09 -1.6
-0.38 0.98 -0.2 0.69 -0.83 -0.04 0.32 0.3 -0.36 0.71 0.1 0.53 -0.88 -0.81 -1.9 -1.1 -2.51 -1.02 -0.52 -0.91 0.64 1.33 -1.4 -0.42 -3.85 -0.83 1.5 -0.7 -0.32 0.64 0.27 -0.21 0.51 0.29 -0.47
-0.44 0.1 -0.29 0.57 -0.27 0.04 0.13 0.7 0.02 0.09 -0.38 -0.08 -0.48 -0.08 -1.58 -0.82 -2.26 -0.71 -0.6 -0.82 0.25 0.7 0.37 -0.13 -1.14 0.48 1.53 0.16 -0.44 0.46 0.78 -0.03 -0.06 -0.74 -0.61
-0.11 0.72 -0.37 0.57 0.11 0.67 0.89 -0.34 0.73 0.95 0.22 0.27 -0.25 -1.14 -0.4 -0.8 0.09 -0.16 -0.21 -0.06 0.31 0.03 -0.04 -0.68 -1.85 0.48 -0.41 -0.51 -0.94 -0.39 -0.21 -0.42 0.59 -0.55 -1.25
-0.23 0.64 0.01 0.63 -0.2 0.27 0.41 1.28 -0.01 0.43 -0.24 0.09 -2.18 -0.02 -1.82 -0.91 -3.22 0.11 0.1 -0.76 0.3 0.7 0.46 -0.4 -0.68 -0.98 0.35 -0.62 -0.4 0.6 0.52 0.33 0.0 -0.83 -0.95
-0.56 0.48 0.0 0.27 -1.25 -1.04 -0.21 0.11 -1.41 -0.14 1.09 0.89 2.14 0.06 -2.81 -2.28 -2.43 -0.59 0.15 0.22 -1.21 -0.38 -2.51 0.11 -1.42 -1.34 -1.01 -5.15 0.85 -0.06 -0.22 0.49 0.14 0.83 1.04
-0.95 0.21 -0.7 0.54 0.13 0.2 1.13 -0.58 0.77 0.65 0.13 0.2 0.69 1.02 -1.28 -1.37 -0.53 -0.33 0.02 0.68 -1.06 -0.67 -0.49 0.08 -0.87 -0.61 -1.36 -0.46 -0.15 -0.44 -0.96 -0.12 0.36 0.56 0.12
0.37 0.6 0.15 0.7 -0.01 0.52 0.78 -0.47 0.43 0.72 -0.37 0.05 0.2 -0.49 -0.53 -1.06 -0.83 -0.38 0.01 0.58 -1.68 -0.92 -2.12 0.3 -1.17 -0.08 -0.67 1.01 -0.33 -0.66 -0.77 -0.23 0.32 0.24 0.36
-0.61 -0.62 -0.69 -0.49 -0.2 -0.12 -0.25 -0.55 0.12 0.03 0.38 0.81 1.02 0.12 -1.1 -0.94 -1.71 0.1 0.14 0.19 -0.1 0.03 -0.22 -0.08 -0.16 -1.5 -1.1 0.08 -0.47 0.55 -0.39 0.96 0.41 0.32 1.12
-1.11 -0.58 -0.97 0.04 -0.33 -0.17 -0.18 0.01 0.21 0.0 -0.46 -0.08 0.34 -0.19 -1.46 -0.67 -1.92 -0.12 -0.02 -0.53 0.92 0.84 0.49 -0.08 -1.57 0.44 2.08 -0.09 -0.83 0.06 0.23 -0.32 -0.12 0.04 -0.93
-0.11 -0.1 -0.3 -0.05 0.07 0.12 0.26 0.31 0.3 0.45 0.12 0.38 0.21 0.56 -1.16 -1.34 -1.31 -0.33 0.21 0.22 0.1 1.21 -0.39 -0.18 -1.52 -2.0 -1.91 0.02 -0.17 0.58 0.33 0.15 0.28 -0.26 0.12
-0.7 -0.12 -0.41 0.63 -0.35 0.04 1.06 -0.48 0.46 0.52 -0.45 -0.28 0.48 1.6 -0.88 -1.47 -0.67 0.37 0.62 0.57 -2.13 -1.11 -1.98 -0.31 -1.05 -1.1 -1.82 0.93 0.35 -0.54 -1.53 0.21 -0.37 -0.01 0.85
-1.28 -0.03 0.14 0.81 -1.66 -0.56 0.57 -0.02 0.25 0.16 0.6 -0.71 0.28 0.31 -2.28 -0.39 -3.18 -0.15 0.68 -0.06 1.21 0.28 -0.4 -0.69 -1.76 -2.56 -2.0 -0.01 0.47 -0.61 -1.63 0.13 -1.39 0.37 2.05
-0.59 0.21 -0.41 0.1 -0.76 -0.28 -0.08 2.02 -0.64 0.06 -0.05 0.12 -2.2 -1.0 -1.26 -0.18 -1.93 -0.46 0.05 -0.55 0.08 1.26 -0.64 -0.05 -1.54 0.66 1.32 -1.99 -1.5 0.03 0.93 -0.86 -0.16 -0.15 0.12
-0.3 -0.54 0.04 -0.63 -0.51 -0.28 -1.39 0.96 -0.7 -0.44 0.45 -0.24 -2.19 -0.35 -0.43 -0.95 -0.16 -0.93 -0.27 -2.09 -0.06 0.08 -0.71 0.73 0.28 0.41 1.72 -0.08 0.05 0.57 0.99 -0.26 -0.2 0.4 0.08
-0.41 -0.43 -0.73 -0.78 0.67 0.14 -0.87 -1.22 0.2 -0.5 0.75 0.72 -2.02 -1.77 0.34 -0.24 0.91 -0.52 0.21 -1.8 1.72 1.13 1.49 -1.34 -1.25 -1.07 -1.77 1.07 -1.67 -2.34 -2.25 -1.97 0.79 0.13 -0.04
-1.01 -0.29 -1.81 -0.44 0.93 -0.6 0.09 -2.01 -0.05 -0.05 0.76 0.86 0.56 0.41 0.39 0.12 1.07 -0.23 0.11 0.16 -0.41 0.91 -0.26 -1.48 -1.57 -1.45 -2.02 0.42 -0.99 -0.96 -1.1 -0.69 0.93 -0.68 1.18
-5.36 -5.13 -4.21 -3.96 0.3 -4.7 -5.2 -3.09 -3.36 -3.84 1.16 0.36 1.82 1.7 -3.06 0.06 -5.39 -0.66 -0.69 0.08 1.32 0.98 3.15 -2.09 -0.52 -1.71 -3.25 -2.19 1.56 -2.37 -2.52 -2.85 -4.81 -0.01 -3.63
-0.56 -0.23 -0.31 -0.02 -0.28 -0.07 0.22 0.3 0.06 0.12 0.82 1.36 0.27 0.43 -1.38 -1.95 -1.27 -0.89 0.02 -0.16 -3.63 -1.51 -3.38 0.35 -2.25 0.45 1.65 -1.32 0.52 -0.04 0.33 -0.76 1.08 -0.6 0.05
-0.81 -0.39 -0.62 -0.42 0.47 -0.1 -0.2 -0.55 -0.8 -0.3 0.21 0.97 -0.26 0.85 -0.83 -1.71 0.24 -0.72 -0.42 -0.13 -1.78 -1.12 -1.82 0.31 0.62 0.17 0.17 -1.07 0.44 0.79 0.12 0.98 0.41 0.81 0.24
-0.47 1.54 -1.75 0.88 -1.51 0.85 1.46 -0.57 2.11 0.03 -1.68 -1.84 -2.73 -0.21 -2.78 -1.73 -4.1 1.2 -0.59 1.25 -0.57 -0.84 -1.29 -2.59 -2.4 -1.77 -1.9 -1.91 1.93 0.02 -1.64 1.07 -1.65 -1.27 -4.04
0.09 0.15 -0.27 -0.09 1.19 0.3 -0.02 -0.23 0.65 0.51 0.59 0.48 -1.6 -0.39 0.13 -1.4 -0.01 -1.41 -0.65 -0.27 -1.22 1.26 -0.56 -0.59 -1.1 -1.98 -1.49 1.4 0.02 -0.37 -0.26 -0.34 0.64 -0.48 -0.28
- - - - - - - - - - - - - -26.52 - - - -3.32 -17.41 -0.07 - - - - - 2.83 4.62 - -1.48 -1.38 0.62 - - -12.67 -
-0.31 -1.24 -2.29 -0.76 -0.2 -0.63 -0.6 -1.12 -0.6 -0.16 1.79 1.96 -3.13 0.55 - -1.35 -5.12 -0.25 -0.3 -0.48 0.3 2.4 0.35 -0.96 -5.32 -4.63 -4.39 -0.3 0.37 -2.14 - -1.17 1.82 0.32 0.11
-0.47 0.15 -0.55 0.05 0.27 0.18 0.26 -0.88 0.24 0.17 -0.78 -0.56 0.36 -0.16 0.46 -0.01 0.58 0.17 0.25 0.93 -0.04 0.48 -0.08 0.33 -0.78 -0.52 -1.28 -0.1 -0.45 0.18 0.49 -0.57 -0.46 -0.6 0.04
0.48 -0.03 0.16 -0.27 -0.16 0.48 0.42 -0.31 0.25 0.27 0.83 0.58 -1.58 -0.14 0.45 -0.5 1.08 -0.04 0.66 -0.85 -1.86 -1.31 -3.56 -0.96 -2.54 -0.52 -0.7 -1.48 -0.28 -0.77 -1.82 -0.35 1.2 1.23 0.84
-1.52 -0.65 0.12 1.08 0.25 -1.14 -0.73 2.12 -1.49 -1.15 1.23 1.07 -1.28 -0.76 -3.4 -3.6 -5.44 -0.28 -0.5 -0.77 2.36 1.31 -0.45 -0.55 -2.77 -1.81 -3.25 0.38 -0.65 -1.49 -1.25 -1.49 0.56 -2.44 0.4
-3.47 - - -3.17 0.51 - -1.5 -2.18 -0.96 - 1.94 2.38 - 3.53 - - - -3.86 -4.23 -3.78 -3.63 -1.74 - -3.22 - 1.0 0.98 -3.18 -3.77 -2.81 -2.26 -1.47 2.44 -1.46 -1.3
-0.77 -0.57 -0.88 -0.37 -0.16 -0.29 -0.22 -0.28 -0.11 -0.16 0.5 0.34 1.53 0.28 -1.77 -0.78 -4.01 -0.01 0.11 -0.34 0.63 0.28 0.25 -0.29 -0.63 -1.51 -2.07 -0.0 -0.92 0.41 -0.51 0.56 0.07 0.29 1.73
-2.5 -1.15 -0.75 -0.26 0.94 -0.71 0.84 -0.48 -0.92 -0.89 1.02 1.49 0.21 1.19 -3.12 -2.37 -1.92 -0.85 -0.11 -5.96 -5.31 -4.72 - 0.99 1.78 0.78 0.38 -1.96 0.73 0.42 -1.13 -0.56 1.14 -0.88 -0.24
-4.99 - - - - - 0.9 - - - 1.14 -3.39 2.11 -0.66 - - - -1.1 - -0.07 - - - 1.81 0.6 3.23 1.77 - 2.42 - - - -7.34 0.34 -
-0.62 -0.08 -0.62 0.03 0.63 -0.36 0.21 -0.55 -0.15 -0.06 0.48 1.04 1.42 1.48 -2.34 -1.52 -3.5 -0.9 -0.58 -0.18 0.42 0.25 -0.03 -0.62 -1.52 -0.71 -0.5 0.26 0.12 -0.82 -0.86 -0.61 0.34 0.54 0.56
0.91 0.68 0.44 0.68 0.76 0.75 0.25 0.51 0.51 0.81 0.99 1.1 -0.39 -3.17 -4.37 -2.23 -3.17 -0.44 -1.08 -1.79 -1.98 -1.61 -2.54 -3.39 -2.52 -0.0 2.31 0.12 -3.29 0.48 -1.1 -1.31 0.86 -2.54 -3.37
-1.31 0.14 -1.0 0.32 0.22 -0.75 0.81 -1.64 -0.22 -0.1 0.16 0.09 1.43 1.3 -1.01 0.04 -0.11 -0.37 0.26 0.33 -1.23 -0.88 -0.43 -0.03 -0.04 -0.94 -2.14 -0.24 0.33 -0.72 -0.8 -0.02 0.0 -0.37 1.4
-0.28 -0.51 -0.39 -0.61 -0.2 0.78 0.05 0.32 0.03 0.53 -0.35 0.21 0.97 2.2 -1.19 -2.04 -1.86 0.32 0.12 -0.32 -0.56 -0.26 -1.08 0.65 -0.65 -1.66 -1.83 -5.5 0.37 0.57 -0.2 0.97 -0.54 -0.05 -4.64
-1.26 -0.02 -0.96 0.02 0.07 0.12 0.48 -0.28 0.36 0.32 -0.26 -0.1 0.87 0.83 -1.31 -1.1 -1.47 -0.59 -0.28 0.21 -1.39 -1.02 -0.68 0.77 -0.11 -0.08 0.2 -0.57 0.42 0.77 0.96 0.04 -0.01 -0.54 0.45
-2.15 -3.89 -2.13 -1.26 0.46 -0.86 -2.72 0.52 -0.97 -0.7 1.61 1.56 1.48 1.28 -0.99 -2.33 -1.62 -1.25 -1.63 -1.48 -0.4 1.43 - -1.89 -2.11 -1.32 -0.64 -1.0 -1.64 0.66 -0.09 0.17 1.79 -0.4 1.26
-0.41 -0.62 -0.59 -0.52 0.61 0.23 -0.39 -0.21 0.23 -0.0 0.42 0.69 -1.05 0.08 -0.59 -0.94 -1.24 0.14 0.02 -0.38 1.08 0.89 1.28 0.69 0.42 -1.5 -1.71 -0.77 -0.35 -0.04 -0.04 -0.4 0.1 -0.45 -0.17
-2.36 -1.83 -2.24 -1.92 -0.26 -1.78 -2.07 -0.34 -1.45 -1.38 -0.41 0.57 -1.79 -2.06 -2.11 -1.42 -3.05 1.02 0.85 1.22 2.16 0.57 -0.57 1.33 1.15 -1.23 -2.03 -1.01 0.73 0.88 0.77 0.08 -0.2 -0.68 0.28
-0.41 -1.02 -0.27 -0.8 0.13 0.66 -0.22 0.19 1.58 1.09 -0.63 -0.4 0.84 0.02 -0.9 -1.14 -0.32 -0.09 0.71 0.35 0.11 -0.54 -0.62 -0.22 -2.75 -1.05 -1.33 -1.42 1.55 -1.46 -1.81 -2.16 -0.46 0.19 1.25
-0.68 -0.08 -0.59 -0.28 0.29 -0.59 -0.33 -0.12 -0.65 -0.44 0.19 0.12 0.99 0.12 -1.52 -1.52 -2.02 -0.22 -0.66 0.56 -0.98 -0.75 0.89 0.09 0.53 0.63 0.34 -0.3 0.53 0.63 0.62 0.53 -0.13 -0.37 0.02
-0.34 -1.16 -0.7 -1.04 0.79 -0.49 -0.53 -1.18 -0.03 0.09 0.12 0.63 0.86 -1.59 -3.38 -1.53 -6.72 -0.68 -1.97 0.85 -5.26 -3.48 -3.05 -0.43 0.4 2.36 2.29 0.83 -0.14 -0.13 0.23 -0.09 0.13 -9.61 -10.67
-2.96 -0.09 -0.35 0.69 -3.4 0.15 -0.24 0.64 -0.43 0.53 2.04 1.82 1.51 -0.51 - - - -1.98 -1.13 -1.94 -2.95 -3.96 - - - 1.67 0.31 -0.17 -0.49 -4.06 - - 2.38 0.6 -0.77
-0.92 -0.67 -0.89 -0.68 -1.14 -0.63 -0.83 0.32 -0.49 -0.42 0.96 0.61 -1.42 0.32 -2.1 -1.35 -4.18 -0.39 -0.2 -0.76 0.48 0.49 0.57 -0.03 -0.6 0.05 2.03 -0.17 -0.02 0.5 1.04 -0.66 0.52 -0.04 -0.18
-0.05 0.14 -0.33 0.21 -0.79 -0.2 0.21 -0.56 0.18 0.12 0.06 0.1 1.02 0.86 -0.82 -0.77 -1.08 -0.08 -0.4 0.29 0.41 -0.08 0.98 0.27 -0.67 -0.42 -1.74 -0.47 -0.87 -0.48 -0.7 -0.18 0.11 0.98 0.4
-1.03 -0.22 -0.87 0.11 0.68 0.05 0.55 0.18 0.85 0.91 0.5 0.76 0.05 -0.59 -1.61 -0.56 -1.27 -0.73 -0.49 0.53 -3.37 -1.37 -3.05 -0.0 -1.45 0.23 -0.09 0.04 0.58 -0.02 -0.53 -0.19 0.93 0.65 0.59
-0.64 0.41 -0.65 0.58 0.77 0.42 1.33 -1.28 1.25 1.19 1.55 1.27 -0.37 1.33 -0.31 -0.33 0.05 -1.12 -3.12 -1.08 -1.26 0.22 -0.21 -2.53 -4.67 -3.84 -5.13 0.07 -1.42 -3.1 -2.93 -3.61 1.71 -2.91 -4.13
-0.66 -0.87 -0.97 -0.97 -1.18 -0.59 -0.93 -0.94 -0.65 -0.72 1.25 1.1 1.34 0.29 -1.18 -0.72 -2.48 -1.21 0.29 -1.55 1.33 1.09 -0.43 0.6 0.0 -1.34 -1.37 -0.15 -1.08 -0.41 -1.57 -0.11 0.99 0.78 1.08
-0.3 0.1 -0.4 -0.0 0.3 0.08 -0.04 -0.79 0.28 0.13 0.42 0.53 0.39 0.07 -0.34 -0.81 -0.96 -0.31 -0.59 0.61 0.06 0.16 0.27 0.15 -0.3 -0.25 -1.1 0.68 -0.47 -0.73 -0.26 -1.36 0.46 0.47 0.77
-0.45 0.47 -0.1 0.59 -0.53 0.04 0.86 -0.0 0.94 1.03 0.31 0.37 0.37 1.36 -1.88 -1.53 -1.69 -0.95 -0.48 -0.34 0.67 0.4 -0.14 -0.78 -3.37 -2.8 -4.09 0.26 0.47 -0.43 -0.58 -0.23 0.58 -0.39 -0.34
-0.02 -0.03 -0.16 0.15 0.11 0.15 0.24 -0.59 0.44 0.38 0.86 0.96 -0.53 -0.03 -0.6 -0.61 -0.14 0.11 -0.01 0.82 -0.57 -0.61 -0.4 -0.55 -1.12 -0.39 -1.49 -0.11 -0.19 -0.43 -0.78 0.08 0.94 0.65 -0.27
0.31 0.68 -0.54 0.74 0.41 -0.1 0.83 -1.14 0.19 -0.03 0.93 0.96 -0.0 0.04 0.7 -0.18 1.24 0.14 0.15 -1.49 -1.28 -0.38 -0.5 -1.14 -1.66 -1.04 -1.74 -0.27 -0.96 -1.62 -1.89 -1.22 1.22 -0.26 -0.15
-1.02 -1.01 -1.54 -2.37 -1.3 -1.7 -2.09 -1.02 -1.88 -2.54 0.67 1.49 -1.75 -0.56 -2.37 -1.15 -4.32 -0.19 -1.04 -3.49 -8.1 -3.26 -6.78 -1.47 -0.65 3.06 3.17 0.09 -1.13 -0.88 -0.36 -2.72 1.22 -3.74 -2.38
-0.31 -0.21 -0.64 -0.38 0.47 -0.19 -0.39 -0.89 0.45 0.24 0.69 0.86 -0.69 1.23 -1.7 -1.79 -2.06 -1.06 -0.53 -1.58 0.3 0.61 1.0 -0.84 -0.9 0.03 -0.26 1.59 -1.22 -0.86 -1.15 -1.44 0.88 -0.64 1.04
-0.1 0.86 -0.19 0.77 -0.07 0.16 1.2 0.04 0.26 0.44 -0.93 -0.94 0.21 0.93 -0.43 -0.51 0.6 0.22 0.74 0.56 -1.16 -0.32 -1.5 0.04 -1.78 0.06 -0.63 0.06 0.14 -0.59 -0.59 -0.73 -0.48 -0.62 -1.69
-0.68 0.76 -0.39 0.57 -0.68 -0.05 0.62 0.37 -0.4 0.61 0.27 0.6 -1.36 -2.0 -1.35 -0.38 -1.68 -0.91 -0.32 -0.29 0.88 1.49 -0.55 -0.01 -2.84 - - -0.11 -0.23 0.68 0.2 0.26 0.76 0.47 0.55
-0.55 0.34 -0.38 0.25 -0.37 0.58 0.68 -0.2 0.6 0.59 -0.01 -0.0 1.35 -0.15 -0.08 -0.36 1.06 0.19 0.32 1.11 -2.07 -0.72 -1.93 0.33 -2.05 -0.32 -1.26 -3.78 -1.04 -0.02 0.29 -1.24 0.39 -0.2 -1.54
-2.15 -2.24 -2.77 -2.13 -0.02 -1.79 -1.76 -0.26 -1.53 -1.81 1.22 0.97 -1.31 0.34 -1.81 -2.18 -1.33 -0.74 -0.72 -1.6 1.63 1.24 2.35 -2.4 -1.12 -1.65 -1.57 0.05 1.12 - - - 1.22 -0.47 2.21
-0.91 0.38 -0.16 0.57 -0.8 -0.64 0.35 -0.08 -0.11 -0.06 -0.73 -1.04 -0.15 -1.76 -1.09 -0.02 -1.62 0.53 0.63 0.97 -0.28 0.31 0.08 1.32 0.16 -1.47 -0.72 -3.59 0.32 0.7 0.81 0.46 -0.88 -0.11 0.26

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.