Heatmap: Cluster_9 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
4h after treatment
4h after treatment,No nitrate
8h after treatment
8h after treatment,No nitrate
20C
20h after treatment
20h after treatment,No nitrate
20h after treatment,Nocodazole added
36h after treatment
36h after treatment,No phosphate
Blue light,10min after light change
Blue light,60min after light change
Bohlin
CCAP1055/1,20C
CCAP1055/1,20C,High CO2,OligoDT primed
CCAP1055/1,20C,Low CO2,OligoDT primed
CCAP1055/1,20C,Normal CO2,OligoDT primed
CCMP2561
CCMP2561 Nitrase Reductase Knockout
CCMP632
CCMP632,24h
CCMP632,48h
CCMP632,72h
CCMP632,High light acclimated WT
CCMP632,Low light acclimated WT
NEPCC640,8h,1000ppmv CO2
NEPCC640,8h,390 ppmv CO2
No light,8h after treatment
Pt-1
Pt-1 8.6
Pt-1 8.6,With nitrogen
Pt-1 8.6,Without nitrogen
Red light,0min before light change
UTEX 646,Blue light
UTEX 646,No light
- 0.74 - - 1.56 - - - - - 0.21 -1.32 3.98 - - - - -1.48 -2.18 - - - - - 1.04 - 2.02 - - - - - 0.39 0.22 1.94
-0.69 -0.44 -1.02 -0.22 0.44 -0.53 0.12 -0.67 0.1 0.2 -3.19 -3.62 0.78 1.28 -1.5 -2.05 -1.16 -0.77 -1.2 -0.25 1.06 1.28 1.27 -1.09 -1.62 -0.45 -0.08 0.9 -1.53 -1.66 -1.26 -1.5 -1.27 0.6 2.14
-0.01 0.03 -0.21 0.15 -0.62 0.3 0.37 -0.66 1.02 0.55 -1.71 -1.4 0.25 -1.43 -0.8 -0.6 -2.54 0.41 0.36 -0.45 0.38 -0.82 -0.2 1.12 0.14 -1.03 -1.61 -0.52 0.44 -0.06 -0.65 0.48 -1.33 0.74 1.47
0.05 -0.23 -0.22 -0.45 -0.11 0.43 -0.48 -0.42 0.48 0.31 0.11 -0.16 1.64 -0.69 -0.1 -0.23 0.49 -0.23 0.04 -0.29 -0.3 -0.43 0.09 -0.02 -0.63 -0.13 -1.0 0.39 -0.39 -0.71 -0.48 -1.22 -0.14 0.22 0.99
-0.89 -0.84 -0.93 -0.7 -0.25 -0.49 -0.49 -0.39 -0.14 -0.28 -0.34 -0.17 0.09 -0.71 0.09 -0.51 -0.26 0.25 -0.01 -0.22 0.51 0.35 0.27 0.65 -0.24 -1.47 -2.06 0.52 -1.12 -0.02 -0.47 -0.22 -0.29 0.72 2.36
0.0 0.18 -0.31 0.17 0.01 0.13 0.41 -0.58 0.53 0.4 -0.76 -0.59 -0.7 -0.77 -1.06 -1.28 -1.68 -0.65 -0.42 0.06 1.12 0.13 0.22 -0.2 -0.45 -1.69 -1.99 1.63 -0.19 -0.34 -0.29 -0.05 -0.45 0.46 1.45
-0.17 -0.54 -0.38 -1.2 -0.76 -0.56 -1.82 -0.48 -0.48 -0.77 0.5 -0.28 2.2 -0.77 -0.01 0.8 -0.21 0.08 0.71 -1.26 -0.17 0.45 0.11 -0.52 -1.54 0.48 0.25 0.91 -0.94 -1.57 -0.73 -2.54 -0.64 0.89 0.62
0.44 1.74 0.26 0.79 -0.18 0.04 0.53 0.34 -0.66 0.48 -0.1 0.36 1.81 -2.36 -3.22 -1.6 -3.88 -0.9 -0.2 -2.59 -0.71 0.27 -2.28 -1.84 -2.83 -0.62 -1.17 -1.77 -2.02 -0.99 -0.7 -1.86 0.58 0.64 2.08
-0.02 -0.12 -0.07 -0.11 -0.01 0.21 -0.12 -0.22 0.33 0.34 -0.72 -0.56 -0.6 -0.96 0.16 -0.44 -0.69 0.28 0.58 -0.51 1.18 0.59 0.27 0.33 -0.81 -1.01 -1.46 0.01 -0.56 -0.22 -0.05 -0.16 -0.49 0.11 1.35
-0.04 0.35 -0.08 0.3 -0.03 0.34 0.39 -0.12 0.46 0.54 -0.68 -0.77 -0.9 -0.84 -0.74 -0.93 -1.69 -0.31 -0.0 0.13 1.16 1.15 0.53 0.01 -0.93 -1.36 -2.15 0.56 -0.55 -0.76 -0.51 -0.79 -0.47 0.37 1.36
-0.87 -0.49 -0.74 -0.5 -0.17 -0.26 -0.33 -0.91 -0.03 -0.1 -0.11 -0.32 0.15 0.37 -0.12 -0.15 -0.36 0.06 0.27 0.09 0.16 0.69 -0.4 0.56 0.11 -0.71 -0.47 -0.52 -1.67 0.28 0.5 -0.29 -0.25 0.38 1.79
- - - - -2.64 - - -0.67 - - - - 2.54 - - - - - -4.79 -3.86 -4.45 - - - - 3.44 4.02 - -4.85 -0.61 -1.05 - - - -
0.24 1.09 -0.39 0.83 0.7 0.85 1.34 -0.15 0.4 0.73 -4.2 - 2.27 - - -1.63 -2.2 -0.52 -0.62 -1.05 0.49 1.07 -0.77 -0.21 -2.36 1.41 0.73 0.86 -2.61 -3.36 -1.36 - -3.12 - -
-0.17 0.08 -0.44 0.22 -0.23 0.12 0.6 -0.81 0.39 0.41 -0.23 -0.17 0.5 -0.63 -0.72 -0.6 -1.27 0.23 0.02 -0.11 0.43 -0.02 0.58 0.44 0.24 -0.71 -1.22 0.35 -0.48 -0.23 -0.35 0.05 -0.36 0.16 0.94
-0.45 -0.23 -0.38 -0.27 0.69 -0.04 -0.35 -0.06 -0.03 -0.09 -1.29 -1.51 0.44 -2.14 1.3 1.03 1.57 -0.19 0.46 0.15 -0.23 -0.57 -0.18 -0.8 -1.17 -0.14 -0.46 0.32 -1.22 -0.72 -0.38 -1.23 -1.21 0.92 0.58
-1.17 -0.44 -1.65 -0.38 0.53 -0.31 0.24 -1.0 0.14 -0.11 -0.43 -1.48 -0.35 0.07 -0.27 -1.06 0.25 -0.35 0.4 -0.18 1.27 0.0 1.35 -0.75 0.94 -0.21 0.07 0.82 -0.15 -0.88 -0.76 -0.85 -1.3 -0.99 1.45
-0.37 0.04 -0.77 -0.03 0.7 0.3 0.32 -0.82 0.75 0.52 -1.29 -1.31 0.42 -1.49 -0.07 -0.1 0.01 0.23 0.1 -0.84 0.83 -0.05 0.74 -0.65 0.45 -1.55 -2.17 0.79 -0.37 -0.64 -0.83 -0.15 -1.08 -0.3 1.47
-0.42 0.3 -0.54 0.62 0.53 0.28 0.91 -0.94 0.54 0.42 -1.5 -1.56 -1.69 -2.22 -0.16 -0.17 -2.28 0.11 0.08 -0.66 0.99 0.65 0.61 -0.29 0.17 0.02 -0.68 0.91 -0.53 -0.1 -0.49 0.46 -1.44 -0.75 0.82
-0.16 0.12 -0.36 0.31 -0.26 0.1 0.54 -0.43 0.44 0.44 -0.59 -0.29 0.03 -0.53 -1.01 -0.7 -2.22 -0.24 -0.02 -0.37 0.95 0.38 0.79 0.47 -0.38 -1.23 -1.69 0.7 -0.64 -0.34 -0.26 -0.48 -0.32 0.38 1.32
-1.36 -0.5 -1.24 -0.51 0.86 1.37 0.03 -1.0 1.54 0.39 -0.98 -1.17 -5.66 -1.26 -0.18 -0.61 0.28 -2.37 -1.03 0.74 1.72 0.32 1.11 -0.2 0.59 0.72 -0.98 1.24 0.02 -3.98 -3.38 -4.58 -0.87 -3.1 -0.54
3.47 - 1.35 - - - 3.89 -7.71 - - - - - - - - - -1.1 - - - - - - - - - - 2.6 - - - - - -
-1.65 -1.27 -1.52 -1.03 1.09 -1.07 -1.07 -0.11 -1.08 -0.94 1.12 0.35 -1.31 -0.5 -1.18 -0.56 -1.71 -0.47 -0.67 -0.58 1.06 1.89 0.95 0.68 -1.07 0.55 0.86 0.23 -0.77 0.92 0.07 -0.17 0.17 -1.49 -1.94
-0.81 -0.25 -1.05 -0.3 0.56 -0.38 0.14 -1.22 0.18 0.07 -0.71 -0.43 -0.15 -0.13 -0.67 -1.08 -0.33 -0.31 -0.02 1.06 1.0 0.12 1.35 -0.07 -0.02 -0.72 -1.33 1.07 -0.39 -0.95 -1.22 -0.54 -0.46 -0.47 1.51
- - - - 1.91 - - - - - 0.62 - 2.69 1.58 - - - -2.16 - - 1.85 - - - - 3.13 2.37 - - 1.34 - - - - -
0.11 0.13 -0.31 0.41 -0.38 0.63 0.82 -0.59 0.77 0.48 -2.3 -2.48 -1.15 -2.62 -0.01 0.29 -1.93 0.09 0.21 -0.36 0.94 -0.13 1.05 0.29 0.68 -0.95 -0.12 -0.55 -0.76 -1.35 -1.14 -1.61 -1.94 -0.69 1.96
-1.44 -0.67 -1.21 -0.75 0.42 -0.52 -0.6 0.64 -0.29 -0.3 0.44 0.62 1.87 -0.43 -1.94 -1.96 -2.77 -0.77 -0.54 -0.7 -0.09 0.7 0.44 -0.8 -1.65 1.07 0.62 -0.37 -1.32 -0.75 -1.22 -0.66 0.85 -0.19 1.7
-0.37 -0.14 -0.48 -0.23 -0.04 0.11 -0.24 0.04 0.07 0.08 -0.1 0.05 -1.04 -1.24 0.03 -0.21 0.19 0.1 0.26 -0.87 0.6 0.97 0.75 0.45 -0.71 -0.69 -0.97 0.81 -1.56 0.1 -0.02 -0.08 0.11 0.09 0.59
-0.57 -0.03 -0.32 -0.17 0.58 0.15 0.41 -0.51 0.65 0.3 -1.01 -0.79 0.43 -0.23 -0.69 -0.21 -1.43 -0.25 0.48 -0.57 0.6 0.3 0.06 0.45 -0.37 -0.06 -0.68 -0.37 -0.84 0.09 -0.32 -0.08 -0.77 0.17 1.49
-1.82 -1.54 -0.79 -0.84 -0.8 -0.98 -0.52 -0.12 -0.08 0.12 -0.73 -0.71 3.17 -1.78 -1.67 -0.5 -1.41 -2.72 -1.72 1.24 -2.16 -0.65 -1.7 0.65 0.04 0.55 2.1 -0.9 -1.0 0.07 -0.68 -0.33 -0.9 -3.26 -2.81
-1.12 -0.52 0.03 0.04 -0.69 -0.13 0.55 0.31 0.6 0.66 -0.09 0.11 1.2 -1.28 -2.71 -1.36 -2.21 -2.59 -2.02 1.41 -5.58 -3.24 -4.54 0.06 -1.42 1.35 2.67 -0.23 -0.48 -0.23 -1.07 -1.01 0.45 -1.99 -1.21
-3.16 -2.66 -1.84 -1.49 0.75 -1.62 -1.12 -0.32 -0.32 -0.56 -2.45 -2.93 3.68 - -3.43 -0.54 -2.81 -2.69 -2.33 0.19 -2.11 -0.72 -2.0 1.18 -4.37 -1.1 1.59 -1.26 0.97 1.22 -1.03 0.64 -3.55 -5.74 -7.25
-0.12 -0.3 -0.46 -0.4 0.36 -0.36 -0.26 -1.06 -0.24 -0.12 -0.81 -0.64 -0.32 0.3 0.8 -0.15 0.69 0.21 -0.02 0.1 -0.25 -0.28 -0.81 0.16 -0.12 -0.8 -0.63 0.06 0.09 0.33 -0.07 0.55 -0.51 0.56 1.31
0.75 0.46 0.08 0.26 -0.43 0.75 0.59 -0.2 0.75 0.96 -1.24 -1.07 -1.19 -2.2 0.61 -0.45 -0.42 -0.37 -0.16 -0.66 1.12 0.22 0.03 0.01 -1.35 -0.05 -1.46 1.31 -1.74 -0.54 -0.17 -0.7 -0.89 0.0 -0.29
-0.54 -0.36 -0.51 -0.12 -1.12 0.02 0.25 -0.07 0.34 0.08 -0.94 -1.46 -0.59 -1.24 -0.83 -0.33 -1.88 -0.47 0.1 -0.84 0.29 -0.4 0.07 0.29 0.28 0.8 1.68 1.6 0.26 -0.31 0.47 -1.3 -1.56 -0.56 0.82
-0.26 0.25 -0.27 0.45 -0.3 -0.01 0.65 -0.09 0.23 0.31 -0.21 0.07 -0.16 -0.78 -1.44 -1.35 -2.28 0.08 0.34 -0.99 0.49 0.65 0.45 0.14 -0.78 -0.86 -1.27 0.51 -0.26 0.21 -0.17 0.35 0.12 0.22 1.02
-0.19 -0.09 -0.56 -0.29 -0.08 0.06 0.2 -0.58 0.23 0.23 -0.64 -0.42 -1.1 0.15 -0.57 -0.93 -1.12 -0.22 0.58 -0.97 1.3 0.7 0.77 0.16 0.02 -1.45 -1.22 -0.16 -1.11 -0.31 -0.66 -0.01 -0.41 -0.32 2.0
0.08 0.15 -0.38 -0.08 -0.19 0.16 -0.3 -0.42 -0.05 -0.12 -0.11 0.06 0.09 -0.45 -0.12 -0.47 -0.11 -0.15 0.09 -0.64 0.95 0.4 0.33 -0.1 -0.23 -0.22 -0.85 -0.08 -0.7 -0.79 -0.39 -1.08 -0.12 0.34 1.8
0.12 0.37 -0.11 -0.06 0.08 0.2 0.08 -0.12 0.49 0.21 -1.08 -0.97 -0.44 -1.13 0.45 0.09 0.23 -0.32 0.08 -0.57 0.49 0.35 0.15 0.8 -0.49 0.06 -0.53 0.49 -0.9 -0.69 -0.89 -0.73 -0.78 0.5 1.0
-0.29 0.2 -0.42 0.28 -0.54 0.03 0.45 -0.02 0.31 0.47 -0.73 -0.93 0.01 -0.4 0.21 0.65 0.08 0.36 0.08 -0.22 0.32 -0.12 -0.07 -0.05 -0.23 -1.28 -1.79 0.29 -0.15 0.23 -0.29 0.44 -0.96 -0.14 1.0
0.48 0.18 1.23 1.32 -2.06 0.89 1.52 0.04 0.95 0.65 1.67 0.07 0.35 -0.25 -2.06 0.54 -2.38 -0.49 1.19 -2.64 -0.54 -1.28 -0.29 - - -0.65 -1.08 -1.07 -1.6 - - - -0.9 1.04 -1.54
-1.02 -0.35 -0.81 -0.09 -0.32 0.09 0.43 -1.31 0.97 0.76 -0.39 -1.02 -0.24 -1.1 -0.66 -0.37 -1.42 -0.13 -0.33 0.66 0.61 -0.79 0.8 -0.58 0.23 0.56 0.51 1.07 0.14 -0.86 -0.38 -0.66 -0.79 -0.01 1.0
-2.25 -0.32 -2.48 0.15 0.88 0.52 0.44 -2.35 1.21 0.79 -0.5 -0.76 -1.48 -1.38 -0.28 -0.3 -0.5 -1.21 -2.04 1.01 1.34 -0.77 1.98 -1.42 0.6 0.29 -0.62 0.45 -0.45 -2.93 -2.59 -2.44 -0.11 -1.04 0.98
-0.29 0.33 -0.15 0.51 -0.26 0.7 0.57 -0.12 0.95 0.66 -0.01 0.21 -0.49 -0.4 -1.42 -1.2 -3.24 -0.67 -0.04 -0.87 1.16 0.2 0.16 -0.43 -0.95 -1.35 -2.38 -0.34 -0.61 -0.54 -1.25 -0.06 0.23 0.14 1.77
-1.07 -0.79 -0.98 -0.84 0.12 -0.73 -0.57 -1.14 -0.56 -0.55 -0.49 -0.22 -0.1 0.46 0.44 0.0 0.03 0.34 0.7 -0.2 0.75 0.75 0.73 0.6 0.17 -1.36 -1.45 -0.18 -0.63 -0.05 -0.52 0.29 -0.31 0.5 1.4
-0.13 -0.0 -0.46 -0.18 0.33 0.07 0.02 -0.99 0.24 0.12 0.02 -0.04 -0.72 -0.97 0.19 0.28 -1.05 0.18 0.33 -0.21 0.81 0.41 0.55 0.32 0.34 -0.97 -1.4 -0.19 -0.87 -0.59 -0.55 -0.33 0.18 0.01 1.33
0.08 -0.22 -0.31 -0.21 0.57 0.19 -0.04 -0.57 0.71 0.44 -1.77 -1.58 -0.85 -2.19 0.03 -0.82 -0.21 -0.18 0.26 -0.5 0.7 -0.41 0.08 0.39 0.17 0.15 -0.04 0.12 -0.06 -0.35 -0.22 -0.24 -1.41 -0.29 1.93
-0.95 0.32 -1.57 0.16 -1.75 -1.69 0.55 -1.99 -1.47 -1.55 0.44 0.52 -0.27 0.45 -0.81 -0.51 0.36 -0.13 0.85 -0.4 1.87 0.46 1.2 -2.78 -3.18 -5.56 -5.29 1.31 -1.83 -0.76 -2.71 -0.46 0.44 -0.38 1.91
0.49 1.49 0.26 0.97 -0.15 0.78 0.5 -0.14 0.01 0.67 0.28 0.52 1.17 -2.18 -1.68 -1.89 -3.29 -1.08 -2.32 -1.94 -0.55 0.92 -1.55 -1.67 -2.81 1.72 1.14 -0.46 -3.56 -1.11 -0.77 -2.42 0.68 -2.37 -0.61
0.02 0.17 -0.21 0.15 0.07 0.62 0.2 -0.71 0.69 0.52 -0.76 -0.75 -2.08 -1.97 0.16 0.04 0.48 -0.47 -0.3 -0.38 1.62 -0.47 0.53 -0.08 0.1 -0.08 -0.8 0.21 -1.16 -0.96 -0.65 -0.78 -0.31 0.02 1.02
-0.26 0.44 -0.28 0.49 -0.54 0.02 0.7 -0.14 0.07 0.26 -0.68 -0.31 -0.14 -0.54 -1.37 -1.12 -3.25 -0.13 0.32 -1.43 0.73 0.75 0.08 0.42 -0.3 -0.44 -0.81 0.62 -1.16 0.24 -0.13 0.27 -0.36 -0.4 1.54
-0.69 -0.62 -0.77 -0.28 -0.28 -0.47 -0.09 -1.22 -0.09 -0.42 -0.77 -0.81 0.28 0.43 -0.08 -0.26 0.36 -0.09 0.23 1.22 0.84 -0.91 1.02 0.48 1.08 -1.59 -2.56 -0.83 0.49 -0.68 -0.52 -0.78 -0.63 -1.66 1.73
0.39 0.12 -0.17 -0.1 0.05 0.51 0.15 -0.42 0.58 0.45 -1.3 -1.34 -0.78 -1.39 -0.79 -1.2 -2.07 -0.12 0.35 -1.44 0.53 0.16 0.33 0.4 -0.22 -0.54 0.05 0.38 -0.56 0.35 -0.32 0.61 -1.13 -0.36 1.8
-0.63 -0.28 -1.3 -0.52 -0.31 -0.33 -0.13 -0.47 -0.15 0.02 -2.71 -2.59 2.36 - -2.25 -4.77 -3.43 -0.77 -1.15 -3.23 -1.1 -0.84 -0.01 -1.75 -1.89 2.61 3.3 -0.29 -1.45 -2.3 -1.68 - -4.48 -6.92 -
-0.36 -0.31 -0.39 -0.42 0.11 0.02 -0.27 0.38 0.26 0.2 -0.87 -0.5 -0.01 -0.16 0.05 -0.19 -1.29 -0.53 -0.11 -0.06 1.06 0.37 0.35 0.21 -0.59 -1.56 -1.75 0.7 -0.45 -0.21 -0.46 -0.19 -0.54 0.38 1.75
0.33 -0.31 -0.56 -0.72 -0.16 -0.0 -0.45 -0.36 0.03 -0.05 -0.25 -0.68 -1.07 -1.04 0.27 -0.48 -0.6 0.2 0.47 -0.48 0.23 0.21 -0.22 0.45 0.77 -0.9 -0.0 0.33 0.17 -0.0 0.12 -0.54 -0.35 -0.94 1.9
0.51 0.26 -0.31 -0.23 0.02 0.87 0.46 0.09 0.7 0.68 -0.08 -0.32 -0.95 -2.12 -0.4 -1.8 -0.46 -0.14 -0.03 -2.16 0.68 0.58 -0.22 0.08 -1.37 -0.85 -0.38 0.9 -1.42 -0.05 -0.21 -0.29 -0.15 -0.5 1.38
-0.06 -0.01 -0.32 -0.04 -0.18 0.17 0.2 -0.59 0.15 0.02 0.13 0.04 -1.28 -1.0 -0.09 -0.53 -0.94 0.15 0.33 -0.59 0.59 0.47 0.3 0.2 -0.03 -1.29 -1.52 -0.13 -0.82 0.31 -0.14 0.72 0.05 0.49 1.25

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.