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Heatmap: Cluster_9 (HCCA)

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(Showing raw values)

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Gene
4h after treatment
4h after treatment,No nitrate
8h after treatment
8h after treatment,No nitrate
20C
20h after treatment
20h after treatment,No nitrate
20h after treatment,Nocodazole added
36h after treatment
36h after treatment,No phosphate
Blue light,10min after light change
Blue light,60min after light change
Bohlin
CCAP1055/1,20C
CCAP1055/1,20C,High CO2,OligoDT primed
CCAP1055/1,20C,Low CO2,OligoDT primed
CCAP1055/1,20C,Normal CO2,OligoDT primed
CCMP2561
CCMP2561 Nitrase Reductase Knockout
CCMP632
CCMP632,24h
CCMP632,48h
CCMP632,72h
CCMP632,High light acclimated WT
CCMP632,Low light acclimated WT
NEPCC640,8h,1000ppmv CO2
NEPCC640,8h,390 ppmv CO2
No light,8h after treatment
Pt-1
Pt-1 8.6
Pt-1 8.6,With nitrogen
Pt-1 8.6,Without nitrogen
Red light,0min before light change
UTEX 646,Blue light
UTEX 646,No light
0.0 0.02 0.0 0.0 0.04 0.0 0.0 0.0 0.0 0.0 0.01 0.01 0.21 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.03 0.0 0.05 0.0 0.0 0.0 0.0 0.0 0.02 0.02 0.05
8.9 10.56 7.09 12.35 19.51 9.93 15.6 8.99 15.42 16.42 1.57 1.17 24.6 34.93 5.09 3.45 6.43 8.4 6.26 12.07 29.95 34.84 34.6 6.74 4.66 10.51 13.59 26.75 4.98 4.54 5.97 5.06 5.97 21.78 63.35
87.97 90.41 76.86 98.8 57.62 109.42 114.32 56.28 179.64 130.09 27.2 33.61 105.38 33.05 50.92 58.5 15.24 117.64 113.54 64.99 115.56 50.45 77.49 193.28 97.64 43.54 28.98 62.04 120.4 85.36 56.47 124.03 35.34 148.32 246.46
86.14 70.76 71.23 60.98 77.24 112.14 59.75 62.12 115.74 102.78 89.66 74.61 259.08 51.73 77.42 71.08 116.76 70.81 85.32 67.82 67.43 61.84 88.7 82.17 53.85 75.81 41.65 109.36 63.52 50.96 59.62 35.76 75.24 96.84 165.53
29.66 30.73 28.76 33.86 46.2 39.12 39.03 41.84 49.71 45.25 43.18 48.88 58.4 33.55 58.24 38.43 45.88 65.4 54.6 47.0 77.84 69.65 66.31 85.93 46.43 19.79 13.16 78.51 25.27 54.25 39.62 47.17 44.69 90.17 282.38
86.11 97.2 69.52 96.52 86.83 93.79 114.62 57.48 124.04 113.47 50.7 57.32 53.12 50.56 41.34 35.46 26.89 54.78 64.09 89.93 186.95 94.16 100.09 75.06 62.95 26.68 21.67 265.96 75.45 67.77 70.44 82.9 62.75 118.37 234.86
36.55 28.19 31.64 17.88 24.31 27.85 11.65 29.37 29.36 24.12 58.18 33.82 189.02 23.99 40.78 71.25 35.39 43.46 67.36 17.08 36.38 56.04 44.22 28.54 14.16 57.26 48.77 77.38 21.32 13.83 24.77 7.07 26.41 76.03 63.11
4.47 11.05 3.95 5.73 2.92 3.41 4.78 4.17 2.1 4.62 3.08 4.24 11.57 0.65 0.36 1.09 0.22 1.77 2.88 0.55 2.02 3.99 0.68 0.93 0.47 2.15 1.47 0.97 0.82 1.66 2.04 0.91 4.94 5.14 13.98
18.14 16.87 17.46 16.97 18.26 21.25 16.85 15.79 23.03 23.3 11.17 12.42 12.12 9.47 20.56 13.55 11.37 22.29 27.36 12.94 41.52 27.65 22.13 23.09 10.47 9.1 6.65 18.5 12.47 15.76 17.78 16.48 13.11 19.79 46.91
12.82 16.74 12.47 16.19 12.88 16.62 17.22 12.09 18.1 19.09 8.24 7.73 7.03 7.34 7.87 6.89 4.07 10.62 13.15 14.43 29.37 29.14 18.94 13.26 6.92 5.11 2.96 19.39 9.01 7.75 9.23 7.6 9.5 17.02 33.86
24.01 31.36 26.27 31.17 39.06 36.76 35.08 23.46 43.03 41.14 40.65 35.17 48.84 56.86 40.63 39.64 34.26 45.82 53.04 46.83 49.34 70.76 33.43 64.74 47.35 26.97 31.77 30.63 13.84 53.58 62.13 35.95 37.1 57.46 152.26
0.0 0.0 0.0 0.0 0.22 0.0 0.0 0.86 0.0 0.0 0.0 0.0 7.94 0.0 0.0 0.0 0.0 0.0 0.05 0.09 0.06 0.0 0.0 0.0 0.0 14.84 22.15 0.0 0.05 0.89 0.66 0.0 0.0 0.0 0.0
1.36 2.45 0.88 2.05 1.87 2.07 2.91 1.04 1.52 1.91 0.06 0.0 5.55 0.0 0.0 0.37 0.25 0.8 0.75 0.56 1.62 2.42 0.67 1.0 0.22 3.06 1.91 2.09 0.19 0.11 0.45 0.0 0.13 0.0 0.0
79.82 94.47 66.04 103.98 76.29 97.04 135.32 51.01 117.2 119.15 76.54 79.75 127.04 57.73 54.33 59.22 37.16 105.31 90.52 82.75 120.68 88.28 133.95 121.46 106.06 54.84 38.55 114.34 64.02 76.12 70.26 92.43 69.94 100.3 171.36
77.29 89.63 80.74 87.2 170.33 102.65 82.37 100.8 103.18 99.15 43.16 37.01 143.03 23.98 258.87 215.67 313.29 92.42 145.05 117.19 89.96 70.79 92.76 60.56 46.7 95.84 76.31 131.64 45.3 64.1 81.22 45.01 45.48 199.97 157.93
250.58 417.32 180.6 436.03 814.27 455.9 668.36 282.89 623.4 522.94 420.32 202.12 444.23 595.33 468.25 270.89 670.8 442.37 743.98 500.34 1361.4 566.1 1443.98 336.84 1082.26 487.41 591.86 995.29 509.23 306.35 334.34 314.21 229.38 284.71 1545.74
53.02 70.32 40.24 67.01 111.83 84.5 85.43 38.92 115.56 98.63 28.04 27.75 91.64 24.43 65.23 63.87 68.97 80.38 73.54 38.35 121.62 66.15 114.67 43.66 93.63 23.5 15.22 118.7 53.25 44.11 38.63 61.63 32.48 55.8 190.64
31.5 52.12 29.03 65.09 60.95 51.41 79.22 22.08 61.33 56.52 14.92 14.36 13.12 9.06 37.83 37.62 8.7 45.69 44.63 26.76 83.7 66.47 64.31 34.68 47.56 42.99 26.31 79.18 29.26 39.4 30.18 58.19 15.63 25.07 74.66
39.09 47.61 34.15 54.38 36.54 46.85 63.55 32.59 59.6 59.3 29.1 35.78 44.89 30.4 21.81 26.95 9.41 37.04 43.2 33.83 84.43 57.08 75.57 60.87 33.7 18.63 13.55 70.99 28.22 34.67 36.57 31.52 35.06 57.15 109.67
1768.47 3229.42 1924.06 3196.49 8284.77 11766.31 4645.17 2271.51 13206.3 5967.85 2303.86 2022.58 89.8 1896.66 4006.86 2989.76 5516.89 882.65 2236.7 7612.93 14981.21 5667.56 9843.76 3977.71 6836.83 7512.73 2302.72 10746.14 4618.41 289.42 438.48 190.18 2488.2 530.76 3132.07
1.17 0.0 0.27 0.0 0.0 0.0 1.57 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.64 0.0 0.0 0.0 0.0 0.0 0.0
1.92 2.5 2.1 2.95 12.84 2.87 2.87 5.6 2.85 3.15 13.05 7.69 2.42 4.27 2.66 4.1 1.84 4.34 3.8 4.02 12.53 22.37 11.68 9.66 2.87 8.81 10.92 7.07 3.54 11.37 6.34 5.34 6.76 2.14 1.57
89.89 133.0 76.07 127.8 232.78 121.28 173.5 67.84 178.36 165.83 96.25 116.77 141.92 144.05 99.03 74.83 125.85 127.56 155.3 329.65 314.37 171.9 402.78 149.69 155.33 95.54 62.52 331.19 120.66 81.6 67.48 108.59 115.0 114.1 450.1
0.0 0.0 0.0 0.0 0.05 0.0 0.0 0.0 0.0 0.0 0.02 0.0 0.08 0.04 0.0 0.0 0.0 0.0 0.0 0.0 0.04 0.0 0.0 0.0 0.0 0.11 0.06 0.0 0.0 0.03 0.0 0.0 0.0 0.0 0.0
35.78 36.22 26.59 43.86 25.46 51.03 58.4 22.04 56.32 46.01 6.73 5.93 14.86 5.38 32.86 40.37 8.68 35.12 38.14 25.79 63.59 30.3 68.31 40.54 52.92 17.1 30.46 22.65 19.51 12.96 14.99 10.81 8.61 20.48 128.61
4.15 7.05 4.87 6.68 15.06 7.83 7.44 17.58 9.2 9.12 15.3 17.31 41.15 8.37 2.94 2.9 1.65 6.59 7.73 6.93 10.6 18.25 15.31 6.44 3.58 23.57 17.33 8.73 4.5 6.7 4.84 7.12 20.31 9.84 36.65
51.3 60.26 47.72 56.54 64.58 71.63 56.46 68.41 69.58 70.02 62.19 69.0 32.27 28.19 67.89 57.27 75.72 71.04 79.57 36.46 100.44 130.11 112.08 90.81 40.75 41.19 33.91 116.55 22.58 71.14 65.45 63.06 71.78 70.63 99.73
9.64 13.98 11.46 12.66 21.3 15.78 18.98 9.99 22.39 17.52 7.07 8.26 19.25 12.16 8.85 12.33 5.3 12.01 19.86 9.63 21.62 17.6 14.89 19.56 11.07 13.68 8.9 11.04 7.94 15.23 11.44 13.53 8.39 16.11 40.04
5.09 6.18 10.36 10.02 10.28 9.07 12.48 16.53 16.92 19.46 10.83 10.93 160.94 5.23 5.62 12.66 6.73 2.72 5.43 42.44 4.0 11.39 5.51 28.09 18.38 26.3 76.64 9.59 8.99 18.8 11.2 14.3 9.57 1.87 2.56
19.72 29.79 43.54 43.89 26.47 39.03 62.42 52.85 64.72 67.26 40.23 46.01 98.15 17.61 6.55 16.65 9.23 7.11 10.51 113.17 0.9 4.53 1.83 44.53 15.96 108.99 271.1 36.3 30.57 36.43 20.35 21.22 58.18 10.74 18.46
0.85 1.21 2.13 2.73 12.85 2.48 3.52 6.14 6.12 5.19 1.4 1.0 98.31 0.0 0.71 5.27 1.09 1.18 1.52 8.73 1.77 4.66 1.91 17.35 0.37 3.57 23.04 3.19 15.0 17.87 3.75 11.96 0.65 0.14 0.05
119.73 105.75 94.65 98.26 166.83 101.15 108.48 62.18 109.76 119.38 73.91 83.08 104.2 160.07 226.04 116.79 209.83 149.83 128.02 139.13 109.43 107.12 73.82 145.4 119.04 74.46 83.71 135.08 138.39 162.77 123.27 189.81 91.05 190.81 322.18
83.27 68.1 52.53 59.43 36.8 83.16 74.58 43.14 83.56 96.5 20.93 23.57 21.66 10.82 75.55 36.3 37.12 38.33 44.22 31.45 107.47 57.66 50.63 49.85 19.47 47.75 18.02 122.68 14.88 34.21 44.07 30.43 26.68 49.58 40.41
772.43 874.32 788.24 1034.06 518.76 1138.27 1340.34 1075.14 1423.25 1189.5 584.64 409.54 747.36 475.76 634.59 893.13 305.05 811.41 1208.66 626.79 1376.43 853.74 1180.05 1375.08 1364.91 1958.59 3597.65 3415.58 1345.89 910.07 1559.09 456.66 381.67 760.86 1982.31
20.07 28.67 20.0 32.74 19.6 23.82 37.66 22.66 28.25 29.92 20.86 25.18 21.57 14.02 8.87 9.44 4.94 25.42 30.52 12.12 33.74 37.86 32.83 26.44 14.02 13.24 9.96 34.28 20.1 27.88 21.39 30.72 26.18 28.09 48.63
37.85 40.7 29.29 35.43 40.89 44.99 49.74 28.86 50.67 50.72 27.68 32.28 20.17 47.96 29.05 22.67 19.97 37.19 64.54 22.11 106.58 70.03 73.93 48.17 43.72 15.82 18.55 38.63 19.99 34.78 27.32 42.81 32.49 34.7 173.48
117.66 123.65 85.61 105.85 97.56 124.35 90.28 83.23 107.83 102.57 103.12 116.49 119.06 81.41 102.94 80.71 103.63 100.17 118.38 71.33 214.83 147.53 139.78 103.91 95.29 95.95 61.84 105.71 68.66 64.55 85.34 52.68 102.31 141.14 387.4
114.37 136.62 97.34 101.29 111.18 120.88 111.26 96.99 148.19 121.61 49.85 53.64 77.47 48.02 143.78 112.03 123.58 84.19 111.61 70.83 148.15 134.18 117.13 182.94 75.1 109.93 73.18 148.16 56.61 65.41 56.96 63.49 61.38 149.01 211.19
292.58 409.29 267.01 433.89 246.03 365.06 486.35 352.09 441.36 493.12 215.44 187.42 360.43 270.76 413.31 559.55 377.72 459.54 376.36 306.35 444.27 328.35 339.08 345.27 304.94 146.9 103.48 435.56 321.14 418.32 292.19 483.49 183.13 324.0 712.03
24.94 20.34 41.9 44.73 4.3 33.1 51.3 18.34 34.57 28.02 56.94 18.75 22.82 15.09 4.3 25.98 3.45 12.76 40.87 2.88 12.31 7.39 14.61 0.0 0.0 11.39 8.45 8.55 5.92 0.0 0.0 0.0 9.57 36.81 6.17
65.09 104.2 75.37 124.77 105.99 140.75 178.68 53.33 259.13 223.99 100.77 65.21 112.29 61.66 83.66 102.14 49.53 121.3 105.22 208.84 201.98 76.81 230.84 88.4 154.96 195.88 188.39 277.57 145.87 73.2 102.05 83.82 76.69 131.37 265.08
649.18 2472.46 552.55 3407.57 5665.85 4408.57 4175.29 604.8 7101.58 5313.98 2172.16 1818.38 1105.22 1181.8 2532.64 2504.48 2171.09 1327.74 748.7 6188.5 7770.18 1800.65 12132.8 1152.35 4650.97 3757.06 1996.58 4196.68 2254.48 405.04 509.98 567.89 2854.66 1497.2 6077.88
19.53 30.04 21.51 33.98 19.93 38.77 35.5 22.04 46.09 37.7 23.71 27.57 17.04 18.1 8.91 10.41 2.54 15.04 23.24 13.06 53.34 27.56 26.78 17.73 12.42 9.39 4.6 18.93 15.68 16.42 10.05 22.93 28.13 26.39 81.78
39.41 47.67 41.77 46.04 89.52 49.78 55.52 37.31 55.8 56.52 58.91 70.7 76.93 113.47 112.25 82.68 83.96 104.22 134.19 72.04 138.47 138.78 136.53 125.34 92.97 32.06 30.3 72.93 53.39 79.44 57.59 100.81 66.36 116.36 217.57
41.12 44.82 32.73 39.75 56.54 47.23 45.69 22.65 53.1 48.83 45.66 43.59 27.26 22.9 51.21 54.39 21.68 50.79 56.28 38.77 78.49 59.77 65.93 56.08 56.79 22.88 17.04 39.47 24.61 29.86 30.77 35.77 50.89 45.29 113.26
39.5 32.09 30.14 32.24 55.6 42.77 36.35 25.18 61.21 50.65 10.98 12.5 20.75 8.2 38.15 21.23 32.26 33.05 44.7 26.35 60.84 28.12 39.65 49.09 42.16 41.44 36.35 40.52 35.96 29.4 32.21 31.61 14.05 30.52 142.95
72.2 174.33 46.97 155.76 41.64 43.16 204.58 35.16 50.38 47.77 189.66 201.08 115.96 191.07 79.49 97.84 179.17 127.34 252.66 105.58 512.28 192.37 320.04 20.39 15.4 2.97 3.57 345.91 39.32 82.54 21.38 101.76 190.05 107.23 524.38
5.69 11.36 4.85 7.93 3.66 6.94 5.72 3.68 4.08 6.43 4.92 5.82 9.13 0.9 1.27 1.09 0.41 1.92 0.81 1.05 2.78 7.65 1.39 1.28 0.58 13.38 8.97 2.95 0.34 1.88 2.38 0.76 6.5 0.78 2.66
50.73 56.3 43.37 55.76 52.64 77.15 57.67 30.64 81.12 71.93 29.62 29.88 11.88 12.82 56.22 51.57 69.93 36.32 40.84 38.43 154.22 36.24 72.5 47.55 53.78 47.61 28.85 57.84 22.53 25.84 32.06 29.27 40.58 51.02 101.53
11.23 18.22 11.07 18.88 9.27 13.65 21.88 12.2 14.12 16.11 8.4 10.88 12.24 9.27 5.19 6.19 1.42 12.28 16.85 5.01 22.25 22.65 14.19 18.0 10.93 9.95 7.67 20.63 6.03 15.86 12.27 16.23 10.48 10.18 39.22
69.3 72.5 65.48 91.96 92.07 80.59 104.7 47.87 104.73 83.3 65.4 63.91 135.29 150.18 105.52 93.25 143.66 104.91 130.79 260.9 200.56 59.54 226.14 155.75 237.09 37.1 18.9 62.74 156.9 69.91 78.06 64.9 72.3 35.41 370.12
29.24 24.24 19.77 20.74 23.04 31.62 24.69 16.62 33.35 30.33 9.01 8.78 12.92 8.49 12.88 9.69 5.29 20.54 28.41 8.2 32.18 24.88 27.9 29.41 19.08 15.35 22.98 29.02 15.05 28.43 17.79 33.87 10.16 17.36 77.71
2.27 2.9 1.42 2.46 2.83 2.79 3.21 2.53 3.16 3.56 0.54 0.58 18.1 0.0 0.74 0.13 0.33 2.06 1.58 0.37 1.64 1.97 3.49 1.04 0.95 21.48 34.71 2.87 1.29 0.71 1.1 0.0 0.16 0.03 0.0
33.48 34.86 32.87 32.31 46.42 43.76 35.67 56.23 51.52 49.46 23.55 30.46 42.81 38.6 44.75 37.85 17.67 29.9 39.95 41.3 89.62 55.53 54.98 49.87 28.65 14.63 12.83 70.06 31.58 37.25 31.32 37.87 29.73 56.22 144.91
34.42 22.05 18.47 16.52 24.44 27.23 19.95 21.31 27.8 26.33 22.88 17.02 12.98 13.27 32.95 19.59 18.0 31.4 37.92 19.59 32.07 31.53 23.41 37.34 46.38 14.62 27.23 34.29 30.76 27.25 29.71 18.77 21.35 14.2 101.93
15.13 12.72 8.56 9.04 10.77 19.33 14.63 11.31 17.23 17.03 10.02 8.52 5.49 2.43 8.04 3.04 7.7 9.64 10.41 2.38 16.95 15.86 9.1 11.22 4.11 5.89 8.15 19.8 3.97 10.26 9.16 8.69 9.55 7.47 27.6
85.76 88.91 71.35 87.05 78.84 100.18 102.38 59.42 98.95 90.31 97.89 91.53 36.69 44.52 84.14 61.82 46.67 98.94 112.51 59.12 134.65 123.74 109.99 102.87 87.46 36.6 31.24 81.5 50.46 111.07 81.15 147.0 92.55 125.55 212.4

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)