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Heatmap: Cluster_93 (HCCA)

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(Showing raw values)

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Gene
4h after treatment
4h after treatment,No nitrate
8h after treatment
8h after treatment,No nitrate
20C
20h after treatment
20h after treatment,No nitrate
20h after treatment,Nocodazole added
36h after treatment
36h after treatment,No phosphate
Blue light,10min after light change
Blue light,60min after light change
Bohlin
CCAP1055/1,20C
CCAP1055/1,20C,High CO2,OligoDT primed
CCAP1055/1,20C,Low CO2,OligoDT primed
CCAP1055/1,20C,Normal CO2,OligoDT primed
CCMP2561
CCMP2561 Nitrase Reductase Knockout
CCMP632
CCMP632,24h
CCMP632,48h
CCMP632,72h
CCMP632,High light acclimated WT
CCMP632,Low light acclimated WT
NEPCC640,8h,1000ppmv CO2
NEPCC640,8h,390 ppmv CO2
No light,8h after treatment
Pt-1
Pt-1 8.6
Pt-1 8.6,With nitrogen
Pt-1 8.6,Without nitrogen
Red light,0min before light change
UTEX 646,Blue light
UTEX 646,No light
12.92 24.17 15.6 28.72 23.17 16.78 29.03 22.95 17.69 24.42 43.18 51.52 54.89 98.66 9.37 17.7 2.81 49.17 51.48 33.09 71.89 55.98 71.87 20.2 18.36 11.43 5.53 34.55 88.09 19.77 13.3 34.67 48.25 29.52 57.09
12.92 24.17 15.6 28.72 23.17 16.78 29.03 22.95 17.69 24.42 43.18 51.52 54.89 98.66 9.37 17.7 2.81 49.17 51.48 33.09 71.89 55.98 71.87 20.2 18.36 11.43 5.53 34.55 88.09 19.77 13.3 34.67 48.25 29.52 57.09
9.79 16.56 6.96 16.99 11.77 13.07 30.66 10.23 14.36 14.99 38.5 38.56 34.84 86.79 6.42 8.16 5.84 37.09 32.68 9.01 10.15 18.32 23.8 12.72 12.82 4.67 4.66 6.75 23.16 23.51 13.85 39.87 34.44 22.08 15.87
11.62 12.51 2.03 7.17 5.45 10.77 11.37 5.64 13.83 11.33 16.36 14.02 58.02 13.75 6.68 7.16 3.6 8.26 18.99 9.19 22.37 16.6 20.65 13.16 5.31 6.6 3.7 30.85 27.88 5.38 4.02 4.4 15.07 20.17 56.04
3.67 3.84 4.14 3.77 5.44 4.35 2.36 12.85 3.73 3.4 24.49 16.2 29.21 17.92 2.24 3.01 0.99 10.5 15.98 6.95 24.4 19.86 8.11 8.67 3.02 5.56 2.8 9.1 26.75 7.12 5.03 10.0 16.21 20.68 14.69
20.8 18.09 16.06 14.8 24.66 22.19 19.01 15.91 25.15 21.5 14.95 17.65 16.0 20.97 18.84 10.09 21.49 17.33 21.18 26.52 14.41 24.89 12.79 31.28 9.61 15.74 13.32 20.98 35.83 14.47 17.51 18.02 19.44 26.7 55.26
19.99 30.58 22.98 39.42 19.81 24.82 45.76 38.62 25.9 32.74 30.95 56.07 50.1 142.04 10.17 23.14 6.86 43.39 38.21 39.26 2.35 9.94 3.62 30.09 22.89 13.26 39.63 48.79 68.07 27.15 27.33 38.98 48.84 48.87 125.51
11.87 10.82 11.18 10.38 19.48 14.89 13.36 14.46 20.88 16.86 17.95 11.69 9.48 14.44 17.67 11.55 5.24 18.79 13.97 9.58 9.44 13.02 7.81 31.49 17.77 25.34 35.62 9.01 16.9 35.69 22.29 47.19 9.98 37.86 29.84
12.56 17.91 12.64 18.5 21.85 22.63 21.77 14.03 21.05 20.28 13.42 17.73 14.51 36.44 5.81 6.14 4.15 13.62 24.39 11.74 2.49 7.38 3.75 11.92 5.49 13.46 11.58 14.71 12.91 23.92 22.23 21.2 19.08 12.36 25.28
22.43 29.07 26.13 29.09 37.62 36.95 45.57 25.43 41.22 47.86 51.59 60.21 13.01 52.42 14.15 42.25 11.7 39.14 27.35 30.67 60.5 82.43 49.92 93.91 38.27 9.2 8.07 21.24 24.59 24.72 25.96 31.39 59.16 41.26 40.84
114.73 152.08 199.17 181.06 96.87 186.05 250.68 147.14 219.41 236.72 116.36 154.83 386.95 2005.44 138.62 142.61 174.95 220.87 672.07 748.35 200.2 235.48 167.63 216.29 57.07 203.84 131.61 141.38 910.97 429.28 149.84 710.71 130.98 226.34 116.04
11.55 33.85 12.5 39.18 12.27 18.04 48.65 17.9 24.74 18.72 35.23 30.13 65.51 64.4 3.75 8.18 4.69 20.81 24.1 15.94 11.49 20.9 14.71 26.47 11.44 9.98 11.34 4.42 41.05 36.55 22.47 55.46 22.71 34.96 28.36
25.96 32.69 20.21 33.64 35.66 26.09 43.16 54.55 32.86 38.68 68.78 92.58 118.04 167.55 14.25 25.61 3.1 74.59 54.54 46.73 77.19 90.87 110.46 78.47 45.31 23.86 74.67 67.76 123.97 92.95 76.68 105.45 86.2 82.95 107.91
33.95 51.08 32.28 58.02 46.99 34.04 96.04 32.38 40.65 44.22 41.99 62.15 104.58 484.18 27.07 35.49 18.82 125.27 155.15 332.81 4.22 16.15 7.41 117.54 74.37 16.55 10.7 9.08 124.07 101.07 63.08 171.51 53.06 102.93 126.75
13.84 16.83 17.38 22.2 22.51 19.17 29.74 28.29 25.71 24.68 44.74 40.39 25.91 45.51 11.77 16.77 10.33 35.95 40.96 61.06 12.7 30.55 14.1 32.68 42.36 61.72 80.82 30.95 60.66 60.11 59.12 54.55 41.94 28.21 62.14
23.34 38.53 44.75 60.42 11.66 22.81 69.24 28.47 24.67 26.13 23.14 30.93 25.35 86.48 6.57 11.45 6.19 38.1 46.85 14.68 12.01 33.85 9.46 36.44 5.02 33.88 19.99 35.97 16.53 39.95 34.87 42.51 29.78 50.73 43.52
29.99 61.52 39.04 83.88 47.86 49.58 120.36 73.17 88.23 87.15 74.14 63.14 159.7 212.1 14.2 42.65 8.62 72.87 106.91 102.2 71.74 68.1 50.55 88.73 45.38 23.73 37.31 73.79 216.93 116.75 71.31 157.42 63.95 139.41 198.55
11.13 15.09 9.84 19.51 15.87 14.45 21.56 20.18 15.41 18.54 29.7 30.9 53.27 53.15 6.89 11.55 1.81 23.84 25.08 22.77 22.72 18.38 36.37 21.22 11.6 4.23 1.42 27.05 40.57 14.05 6.33 22.75 27.19 26.55 24.62
6.38 11.81 6.23 14.26 21.52 8.99 16.83 11.16 10.62 14.01 59.4 35.34 37.83 37.55 8.58 10.6 3.37 19.37 36.79 41.12 35.37 34.12 37.92 13.07 18.44 6.59 6.58 17.42 39.65 12.45 11.18 15.04 29.95 4.2 9.1
24.07 224.14 53.63 338.47 165.46 91.83 506.31 86.8 343.86 309.68 167.02 217.41 743.99 1784.97 246.2 360.74 441.04 510.26 789.43 611.0 222.1 252.35 236.56 872.83 158.9 109.09 54.88 107.89 178.79 391.56 182.17 470.3 193.33 349.56 853.31
11.41 18.84 10.17 20.77 15.03 16.87 28.25 30.23 16.89 20.02 18.21 27.21 24.54 50.6 13.31 10.23 14.75 31.67 33.75 16.62 13.93 13.87 14.4 23.17 26.13 13.13 10.58 17.09 38.56 41.93 34.99 46.71 27.79 23.61 36.29
40.82 49.53 51.71 66.2 59.88 55.07 69.05 56.0 62.99 75.88 87.98 73.01 50.41 79.75 26.59 28.48 9.09 65.26 113.55 77.32 150.97 99.41 218.67 40.31 59.43 16.91 9.74 109.4 141.57 52.97 37.1 87.81 67.79 31.81 114.24
146.26 182.26 138.64 198.32 224.21 189.92 334.33 129.44 222.03 291.15 271.16 291.98 283.23 2011.72 39.71 74.48 5.91 371.25 438.37 325.72 402.94 338.01 905.15 163.02 163.91 32.53 29.59 315.43 335.08 228.37 107.92 423.12 270.34 159.73 582.92
66.72 115.91 67.94 131.95 48.3 78.77 178.55 93.9 91.21 125.25 180.09 175.5 109.18 173.21 21.46 38.13 15.56 113.94 85.61 71.9 96.97 123.75 85.75 35.83 38.22 18.09 39.97 144.4 221.72 128.93 76.29 179.06 163.2 145.69 243.72
7.12 13.73 13.82 17.55 22.91 8.93 25.53 18.08 16.76 20.47 17.14 18.98 29.21 138.49 5.02 5.59 4.84 19.56 25.57 28.29 26.33 25.98 53.47 24.64 27.83 2.67 1.85 21.86 40.37 46.25 22.69 58.5 23.01 11.52 24.36
2.66 3.77 2.81 3.88 15.92 3.4 4.97 3.08 5.6 5.5 20.55 34.34 25.86 85.35 1.66 2.83 0.37 8.19 9.2 26.73 32.5 13.63 30.26 5.35 3.72 4.52 2.61 6.41 15.59 6.7 3.59 8.93 17.2 36.95 38.74
34.6 51.94 43.16 63.56 40.46 40.54 74.43 44.28 64.51 61.96 68.71 86.67 53.44 189.36 19.27 35.48 6.13 71.81 59.84 65.54 90.84 90.89 126.55 55.64 51.87 23.83 28.83 118.25 61.44 130.66 110.41 110.64 81.39 55.31 123.95
36.71 51.47 66.5 82.35 43.16 31.09 86.7 63.26 73.39 80.05 142.54 107.73 171.61 317.11 20.61 39.14 14.9 90.48 73.55 138.37 129.91 111.42 193.4 45.24 75.96 29.81 14.34 115.48 136.95 71.4 33.76 101.99 71.08 57.53 48.15
15.06 29.5 5.17 18.21 57.34 12.44 55.97 8.5 28.88 27.8 53.25 40.5 57.73 119.33 21.4 12.45 11.79 127.91 120.33 4.96 62.24 88.31 45.58 5.79 6.12 2.28 1.29 179.77 34.41 42.51 6.72 76.71 32.51 23.16 4.56
48.99 65.15 75.67 92.11 113.19 72.57 117.91 66.09 122.53 112.35 91.67 114.66 259.5 447.89 44.65 46.7 31.66 195.13 131.83 263.58 128.71 131.69 131.53 203.33 185.17 88.23 97.87 78.8 383.89 261.19 182.8 332.11 103.55 150.7 137.94
26.59 39.39 13.73 33.07 11.01 26.1 66.82 20.25 38.9 32.41 9.48 15.03 9.03 108.96 4.2 9.58 1.09 43.42 41.83 50.62 69.5 30.58 41.86 10.02 2.43 2.66 4.4 45.06 130.01 21.55 9.04 44.9 10.48 18.92 3.2
8.92 9.24 6.66 12.19 35.69 10.86 19.35 12.35 14.66 13.54 70.61 108.02 61.46 209.13 11.19 9.71 4.85 56.93 30.75 38.46 118.3 53.68 120.67 47.59 45.09 5.28 2.27 28.57 57.11 35.38 9.9 57.26 69.51 50.92 98.94
46.84 156.18 36.9 167.72 55.1 145.58 468.91 56.45 177.84 156.69 27.52 22.26 173.11 396.16 13.7 46.19 5.25 519.2 264.87 173.4 166.7 118.14 118.26 46.35 18.02 53.34 43.38 33.29 329.93 86.12 69.66 153.52 21.37 28.8 8.58
11.85 49.29 13.01 51.49 31.18 27.77 74.44 24.13 37.71 34.34 84.32 77.51 55.55 173.32 6.78 10.67 4.43 43.15 46.43 34.74 29.01 44.1 34.46 19.34 15.09 6.73 5.15 34.53 36.31 28.48 17.48 42.73 67.28 30.11 60.36
9.65 15.78 11.44 21.41 15.82 17.46 29.52 21.66 22.42 23.08 16.59 19.76 56.47 42.57 6.3 7.79 4.62 17.7 21.29 17.0 15.89 23.05 17.86 26.6 12.69 2.37 2.75 12.97 31.35 26.74 21.65 28.99 19.08 20.64 63.17
26.07 43.07 22.32 44.82 20.59 26.45 49.63 22.22 26.7 32.07 45.73 77.62 57.41 144.32 18.18 20.68 8.2 69.9 57.73 29.46 49.02 41.89 31.45 25.26 7.2 8.17 4.02 49.49 15.14 40.63 27.75 55.08 61.0 37.89 34.65
26.86 44.88 48.0 48.92 31.16 42.52 64.41 36.64 63.87 78.23 23.67 27.18 15.66 21.97 11.57 40.37 5.76 40.83 39.15 31.29 130.8 55.36 150.92 35.19 56.67 15.43 8.77 15.64 41.95 20.74 19.98 23.19 24.6 35.99 12.48
11.56 15.3 11.24 13.45 10.62 12.12 17.7 8.69 13.75 14.29 21.57 23.75 11.3 15.44 10.92 9.28 8.34 14.9 17.84 11.15 6.47 14.44 5.84 9.52 3.61 9.11 6.91 11.07 15.93 13.28 12.73 17.29 22.29 29.31 39.05
53.4 78.79 59.22 76.82 78.8 82.49 83.87 57.48 99.8 100.77 80.46 67.39 124.75 41.07 22.12 38.55 11.79 75.89 50.75 62.28 33.82 69.54 39.88 62.04 37.61 32.21 29.51 115.06 104.2 103.11 82.81 139.33 73.34 120.49 110.14
54.67 89.75 58.29 104.02 43.92 76.41 135.65 80.0 104.27 114.28 52.91 55.61 181.18 81.59 33.49 51.66 15.04 86.27 95.05 76.84 96.31 72.3 106.26 121.98 73.38 33.84 27.05 55.21 138.81 100.2 62.52 147.55 55.95 121.44 121.03
20.34 35.02 19.35 40.37 16.77 26.93 48.67 28.37 30.58 38.26 35.3 44.94 42.88 35.41 12.85 21.9 10.34 35.01 39.3 14.27 13.2 20.98 13.28 23.34 14.09 6.54 6.38 24.09 40.58 26.26 28.78 34.84 47.1 36.35 76.27
38.39 37.65 21.02 35.1 123.73 32.08 41.58 27.98 38.55 44.6 134.13 89.44 286.97 122.05 43.72 58.04 14.58 58.6 135.82 50.12 17.0 36.08 24.47 26.71 46.82 14.36 11.33 205.36 202.61 27.24 20.01 45.35 97.3 80.88 102.67
6.67 12.35 8.64 17.22 16.54 9.33 26.72 17.63 13.46 13.71 20.01 23.04 15.5 59.66 4.81 5.09 5.02 21.63 31.71 13.46 8.9 12.45 14.61 19.35 19.03 11.03 10.74 20.75 21.02 31.9 23.43 28.15 19.88 18.74 34.39
366.33 602.63 390.56 620.48 425.33 404.98 682.53 356.29 438.23 649.86 744.61 978.81 470.28 1275.06 179.14 360.86 104.88 600.47 521.32 635.23 554.67 906.42 799.41 373.86 282.37 53.44 120.53 569.68 809.34 626.84 326.62 1036.52 942.26 408.53 455.71
39.02 90.87 28.33 54.61 58.42 52.68 137.08 40.25 60.54 58.24 35.51 53.18 75.34 471.44 18.45 9.39 28.01 252.99 135.8 17.38 75.21 58.19 65.88 102.44 64.54 0.99 1.12 67.6 103.61 97.9 49.98 139.26 31.03 80.57 12.26
26.66 37.77 37.78 52.67 29.41 23.17 57.9 75.5 27.77 36.98 70.59 81.57 81.0 184.84 23.89 24.68 23.12 61.44 95.37 58.08 34.96 48.83 33.25 46.5 37.8 19.4 16.95 72.61 136.6 52.48 33.68 66.84 73.9 24.11 81.56
5.2 8.06 10.48 14.49 6.13 5.56 12.33 12.67 13.66 14.19 34.18 32.41 18.88 17.05 6.23 7.16 1.41 30.03 24.84 10.53 122.08 49.14 165.11 19.85 30.2 1.56 0.99 8.9 41.95 17.09 3.31 31.81 28.01 30.72 37.28
14.19 29.81 17.51 41.09 44.29 29.29 52.38 24.0 41.8 40.29 57.69 26.07 32.32 27.84 7.69 13.75 7.28 24.29 32.77 14.68 29.77 45.64 34.91 24.6 31.92 36.44 32.22 11.28 40.62 55.69 34.14 75.91 20.98 67.75 48.67
34.08 41.64 30.86 37.96 33.61 34.37 34.54 23.77 36.45 38.47 62.84 68.31 42.36 54.14 28.92 31.81 10.96 52.04 37.16 27.33 110.45 72.93 91.99 34.8 31.52 24.54 13.66 22.06 22.38 19.72 18.88 26.41 56.07 68.21 40.77
21.36 26.41 24.4 29.99 40.28 34.88 38.39 44.17 41.57 52.65 74.68 57.98 215.38 159.12 10.37 20.1 7.21 72.73 49.63 129.03 36.23 61.54 47.99 78.92 24.52 42.16 40.87 11.2 163.37 84.52 87.02 77.51 56.26 44.77 80.61
101.99 136.23 119.67 177.37 118.44 121.93 264.23 94.76 278.67 255.22 77.73 76.84 131.99 469.44 74.7 124.39 38.43 388.02 195.65 412.06 969.89 314.21 1487.88 222.71 431.95 146.87 257.84 288.43 583.18 263.12 158.7 360.7 76.39 93.55 288.16
53.83 78.88 83.18 97.78 31.24 63.47 84.2 274.9 61.53 76.73 91.46 60.87 364.54 285.32 12.86 30.96 5.21 69.92 151.15 50.83 65.27 55.74 70.71 35.52 13.68 33.01 11.98 37.27 251.07 51.89 36.13 57.51 55.89 118.37 56.36
8.69 7.61 18.38 16.19 54.85 15.13 19.7 26.07 11.45 23.08 34.77 49.68 200.01 369.45 6.25 3.53 3.6 32.93 44.19 66.02 14.92 37.27 27.64 33.64 13.75 7.49 5.02 0.46 80.1 56.39 15.31 95.83 32.57 48.97 1.76
48.36 73.8 32.04 78.74 107.94 24.79 112.62 44.8 45.95 34.79 412.58 535.25 973.25 2835.55 24.64 33.65 8.62 231.02 356.91 523.42 302.09 68.27 323.73 64.15 125.03 92.44 31.4 37.33 217.01 117.86 28.22 300.51 284.98 499.33 534.3
12.66 18.93 13.95 26.77 15.82 14.45 29.09 17.54 18.18 25.89 39.65 41.03 60.0 23.16 8.06 10.82 10.6 19.9 30.26 23.59 14.28 27.55 12.38 19.43 11.36 16.69 9.62 37.84 74.59 24.48 18.17 31.44 43.41 37.41 69.07
0.73 1.42 0.81 1.55 4.68 1.42 2.26 1.83 2.34 2.58 10.47 12.57 11.97 7.15 0.86 1.26 0.3 5.71 5.87 2.46 2.74 3.47 3.3 3.77 3.77 3.46 2.29 2.0 4.56 2.51 3.05 2.46 13.36 5.61 12.5
25.53 39.31 23.77 44.48 77.66 28.72 49.52 21.93 54.11 42.21 58.71 78.22 236.26 315.4 9.06 15.72 2.21 33.55 48.17 127.72 131.84 94.19 247.27 40.38 23.48 48.37 38.2 82.14 63.98 47.78 16.76 85.6 68.53 38.95 59.09
13.49 25.78 9.18 31.58 39.8 16.61 52.8 19.91 24.6 22.85 26.67 36.98 113.66 120.38 11.01 14.85 10.82 37.94 40.99 42.65 18.48 32.28 27.76 39.58 42.45 35.54 33.06 34.08 27.79 45.61 25.69 65.97 45.04 13.55 36.99
3.74 5.16 2.91 5.05 7.78 4.56 6.64 4.76 5.51 5.47 24.84 31.95 36.56 28.38 3.07 3.08 0.92 12.52 13.76 8.34 11.52 15.28 10.59 11.03 5.78 10.15 20.66 4.4 12.98 16.6 12.02 23.56 28.52 15.41 21.89
6.27 15.13 7.14 21.9 11.41 9.07 33.61 12.15 14.55 13.86 56.22 45.79 36.13 34.02 3.85 8.04 1.84 27.56 35.53 40.02 9.79 21.69 13.13 21.6 16.01 111.27 115.56 19.18 39.71 47.55 39.31 49.24 47.82 25.97 37.22
1.57 3.65 2.3 4.65 5.17 3.21 7.53 4.28 6.23 7.69 15.92 18.55 18.05 15.13 3.05 7.48 0.49 14.13 13.03 12.19 27.11 13.51 26.73 5.85 5.28 3.73 2.06 5.37 9.86 2.4 2.57 2.99 18.75 10.34 20.18
0.63 1.55 0.66 2.17 3.97 1.14 2.63 1.53 1.71 2.79 8.67 9.68 7.11 1.59 1.04 1.14 0.56 3.01 4.39 2.4 4.21 4.82 4.7 2.94 1.16 3.08 1.69 3.11 3.04 1.13 1.39 0.8 8.79 1.46 4.42
7.35 18.77 18.61 30.93 17.11 19.36 37.93 38.67 23.38 28.0 35.37 32.05 40.44 84.36 5.32 9.5 4.45 25.61 28.41 38.46 16.73 34.62 26.8 24.6 20.97 7.78 32.98 19.31 47.14 44.97 29.76 55.5 36.82 29.88 71.02
11.46 23.15 10.51 28.73 19.23 17.75 46.24 15.94 23.07 22.91 32.72 41.3 48.22 83.65 8.88 8.01 12.06 33.85 39.49 36.67 8.23 10.01 10.89 20.53 19.78 11.79 9.29 15.26 33.61 36.36 20.84 48.39 45.78 22.08 31.03
34.04 41.55 33.14 46.93 51.74 41.7 47.23 35.75 49.08 49.79 60.33 69.9 95.6 95.6 10.28 21.55 3.52 39.92 57.08 46.0 33.97 44.42 92.89 25.43 42.7 14.8 16.63 60.02 76.72 35.51 25.99 53.97 67.49 67.5 87.76
8.13 16.26 6.65 15.67 18.26 10.11 18.12 7.3 11.81 13.04 36.32 32.45 25.11 17.19 6.89 11.41 10.14 16.69 26.81 29.93 22.93 24.84 25.99 27.8 36.69 3.99 3.74 6.01 54.96 20.47 17.68 22.1 28.1 22.36 57.35
9.8 24.16 14.39 33.68 20.73 15.05 34.84 22.98 16.43 16.87 95.43 68.12 56.49 168.98 8.94 24.58 7.56 75.18 96.85 21.29 75.44 85.62 76.72 37.37 25.52 3.79 3.14 5.93 95.47 64.35 32.42 96.41 44.32 113.74 32.21
175.59 280.25 139.74 275.85 261.67 150.37 307.07 81.32 185.52 231.83 416.39 487.54 583.81 819.31 63.64 216.54 84.43 157.06 450.76 370.33 67.84 204.92 63.41 131.75 164.69 74.97 38.43 246.92 930.77 273.44 222.45 520.26 484.22 465.12 257.76

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)