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Heatmap: Cluster_23 (HCCA)

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(Showing raw values)

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Gene
4h after treatment
4h after treatment,No nitrate
8h after treatment
8h after treatment,No nitrate
20C
20h after treatment
20h after treatment,No nitrate
20h after treatment,Nocodazole added
36h after treatment
36h after treatment,No phosphate
Blue light,10min after light change
Blue light,60min after light change
Bohlin
CCAP1055/1,20C
CCAP1055/1,20C,High CO2,OligoDT primed
CCAP1055/1,20C,Low CO2,OligoDT primed
CCAP1055/1,20C,Normal CO2,OligoDT primed
CCMP2561
CCMP2561 Nitrase Reductase Knockout
CCMP632
CCMP632,24h
CCMP632,48h
CCMP632,72h
CCMP632,High light acclimated WT
CCMP632,Low light acclimated WT
NEPCC640,8h,1000ppmv CO2
NEPCC640,8h,390 ppmv CO2
No light,8h after treatment
Pt-1
Pt-1 8.6
Pt-1 8.6,With nitrogen
Pt-1 8.6,Without nitrogen
Red light,0min before light change
UTEX 646,Blue light
UTEX 646,No light
1219.37 630.86 941.42 648.76 31.95 1661.79 632.67 390.3 2420.35 1448.25 881.17 265.33 268.42 441.71 14.47 1318.08 3.34 404.65 583.87 75.07 301.61 28.84 964.36 62.75 32.63 15.65 7.08 6947.13 1523.99 40.94 9.35 83.98 126.7 1757.62 213.48
121.15 83.98 93.45 53.31 37.7 84.65 39.23 53.64 74.54 61.18 74.64 26.53 2.74 8.15 61.84 53.24 68.68 48.34 55.62 8.41 28.5 53.21 29.76 39.52 13.88 60.71 42.57 385.06 33.82 38.53 67.61 5.62 26.9 59.35 20.6
0.68 0.38 0.52 0.23 0.72 0.52 0.07 0.78 0.21 0.32 22.04 2.55 0.11 3.48 0.63 0.3 1.5 1.47 1.11 0.37 0.12 0.54 0.04 0.48 0.4 2.58 4.26 382.73 10.71 1.58 1.68 0.51 4.85 5.54 79.43
2.31 2.34 1.59 2.14 3.39 0.87 1.91 1.64 0.92 1.98 25.71 9.39 0.43 22.89 2.46 1.84 1.86 5.68 4.11 0.5 1.02 3.22 1.65 0.71 1.61 3.02 5.62 197.75 18.46 3.07 2.18 5.23 5.55 3.93 10.94
133.6 109.78 92.27 66.75 95.72 82.38 59.03 32.34 131.03 125.83 541.44 349.03 85.99 63.67 64.9 95.23 33.23 77.82 33.7 105.92 101.4 156.8 123.61 43.7 109.58 216.82 249.63 1115.95 214.46 74.07 130.94 59.67 310.06 123.64 88.96
2324.85 1283.18 2385.06 1053.23 226.53 2945.61 489.41 2858.35 3137.1 1796.27 2201.68 1413.75 204.46 205.95 462.75 3841.85 710.65 1064.76 688.56 507.89 464.82 406.04 1404.71 714.47 391.08 3596.15 1341.93 4565.88 1164.18 297.55 936.83 20.87 1496.73 2908.91 125.07
21.67 30.87 25.52 38.92 101.04 25.26 52.7 18.61 52.76 43.55 33.04 39.84 92.33 64.65 19.01 25.77 12.03 77.33 45.88 31.29 15.17 22.48 28.27 18.77 16.27 41.42 20.75 576.74 66.06 38.66 38.96 35.32 43.49 41.86 65.14
62.81 53.92 45.68 48.83 53.43 35.9 55.09 34.59 28.7 45.87 530.44 195.91 87.44 228.93 45.69 38.42 30.84 70.73 87.77 53.29 23.14 62.26 29.87 66.63 90.7 17.33 31.21 173.56 251.96 100.69 73.26 137.29 133.64 208.67 123.88
10.03 3.05 11.8 2.4 1.03 4.57 0.84 8.44 6.52 5.34 98.25 17.85 0.44 0.29 9.16 53.96 11.46 7.97 6.74 0.48 8.54 12.84 18.84 1.35 0.06 4.44 1.08 59.7 3.12 0.39 1.47 0.0 30.11 5.91 0.3
7.03 4.68 9.95 3.43 13.79 11.68 2.4 53.82 12.57 4.97 924.57 92.6 11.57 22.7 13.84 57.05 11.4 18.84 25.64 1.1 9.9 20.53 43.68 3.52 12.55 22.44 5.12 882.4 45.22 5.91 8.88 6.75 177.22 189.61 8.19
3.65 2.59 4.85 1.7 22.04 4.96 1.56 17.93 4.3 3.03 179.66 23.62 3.65 8.9 17.09 16.32 8.71 13.77 16.84 1.23 7.22 11.85 8.06 3.94 18.56 7.27 2.45 306.53 21.88 5.98 9.73 9.47 32.91 45.7 4.77
28.59 19.62 16.66 19.8 16.55 29.61 25.98 17.01 24.66 22.66 60.86 23.21 46.27 12.51 15.29 8.95 14.78 37.46 35.18 5.37 15.16 14.16 17.37 11.01 5.68 6.3 10.41 354.4 68.33 33.18 21.88 37.76 14.44 113.1 13.48
6.01 6.45 5.24 7.65 4.09 1.21 4.71 0.59 6.96 7.33 31.7 1.35 0.0 1.37 0.24 0.0 0.28 2.42 1.47 0.02 10.65 28.74 6.78 1.9 4.2 4.71 1.68 1733.94 24.23 1.45 1.77 1.99 12.42 1.23 2.38
3.99 4.01 1.57 0.93 8.01 1.78 0.99 1.91 1.64 2.55 365.06 41.88 3.73 16.19 2.38 0.36 2.0 7.13 8.99 3.07 17.67 67.15 20.28 7.83 31.64 4.1 1.81 3595.91 58.53 8.11 8.11 12.82 106.2 17.6 18.99
33.54 31.36 34.32 37.01 18.37 26.16 29.36 39.77 27.82 35.7 440.53 79.01 33.89 16.05 75.01 35.59 92.47 39.87 68.47 16.48 23.66 94.7 18.28 44.05 29.78 83.55 175.28 242.41 49.33 81.94 120.26 41.93 134.22 120.1 63.37
15.66 16.82 24.97 30.36 5.51 14.2 39.8 27.13 22.66 25.33 46.28 6.79 38.7 11.51 7.56 6.55 9.75 29.45 37.53 38.6 12.95 21.3 10.62 88.5 55.09 56.81 40.5 582.32 53.36 27.84 42.93 26.57 40.92 33.29 6.46
30.61 51.41 52.96 73.45 22.87 36.94 109.59 50.95 69.47 72.59 619.05 98.75 269.27 65.12 42.21 32.51 51.81 125.88 128.04 61.32 42.42 55.72 64.44 232.64 209.06 179.03 162.05 949.62 301.36 182.33 233.53 183.29 279.15 301.8 32.84
267.65 452.98 181.19 287.47 554.29 74.7 255.78 169.38 134.56 209.95 876.55 675.33 385.86 1544.43 199.66 372.07 152.38 836.03 1041.02 226.14 172.39 271.6 335.13 182.14 336.95 299.69 223.08 4667.01 1573.22 406.64 222.64 725.85 388.67 1688.77 1450.62
10.04 9.53 4.94 7.13 18.83 8.63 12.34 5.4 11.67 11.77 2.85 2.12 2.6 0.0 5.37 1.21 0.82 4.13 4.65 5.54 17.85 23.68 18.81 1.75 4.71 5.37 4.95 97.97 7.03 5.14 2.14 6.81 2.97 1.71 0.37
95.56 59.01 92.76 34.98 117.33 87.24 27.67 121.02 101.3 95.97 413.05 257.29 22.39 33.62 71.61 41.92 106.42 41.82 39.29 19.92 96.63 177.65 165.3 32.92 31.94 111.29 77.57 509.73 110.8 55.87 86.26 34.85 269.62 212.79 99.19
67.87 88.59 85.08 99.45 329.98 37.6 40.13 42.31 137.12 103.97 557.38 595.49 51.45 22.07 91.82 169.71 14.17 154.06 89.73 134.58 67.64 174.55 199.53 28.0 71.82 4.45 3.11 2123.29 27.95 8.76 9.89 8.12 511.62 42.8 18.53
38.15 51.17 41.74 55.14 13.59 37.93 75.98 47.0 119.68 85.1 192.36 22.65 2.5 9.18 12.25 32.73 6.01 52.0 58.19 4.78 21.66 18.91 18.99 7.86 2.77 5.23 2.2 530.59 93.78 6.02 9.36 6.25 21.97 94.08 19.58
81.89 59.63 74.05 41.46 46.75 70.07 18.75 225.79 41.73 42.1 279.11 89.58 12.55 40.47 76.04 190.29 65.42 66.84 80.68 31.22 105.63 199.49 131.38 36.73 18.83 64.04 25.79 399.69 127.04 46.39 63.8 34.8 139.76 86.66 96.07
9.44 9.64 9.3 8.16 7.38 8.25 7.58 5.75 10.31 13.4 43.38 14.92 2.08 4.33 17.77 8.67 15.78 5.21 6.85 5.28 6.31 9.16 6.69 8.58 3.88 19.93 9.48 86.57 10.11 6.76 12.33 1.24 18.92 4.07 26.16
19.61 67.74 27.5 71.91 18.47 18.67 100.86 9.95 36.39 48.57 85.05 20.95 22.91 14.08 28.0 38.19 52.78 38.96 35.8 22.28 5.82 10.35 10.05 14.34 10.9 34.99 12.42 176.57 32.88 16.43 23.19 12.17 31.3 36.73 34.32
8.22 12.05 6.01 7.75 23.67 11.62 10.13 8.55 16.26 12.18 143.05 105.66 18.78 15.13 15.58 10.84 14.37 26.8 30.78 5.81 5.83 25.51 13.24 5.96 3.78 8.19 4.97 274.5 26.75 8.8 11.15 7.8 96.35 113.66 20.62
2.28 2.45 3.3 1.37 10.94 1.16 1.01 7.99 2.4 0.75 135.49 122.05 133.57 13.24 45.31 19.46 21.1 32.33 64.69 2.99 47.03 416.92 94.87 20.62 14.45 25.9 36.88 1000.76 22.56 55.89 101.52 3.94 52.46 64.83 1.84
102.74 53.28 83.35 39.43 128.81 57.52 20.21 115.31 114.66 79.39 422.05 434.86 74.49 311.69 85.49 60.42 29.97 80.36 40.7 127.15 174.49 184.63 293.86 48.1 66.7 133.75 87.9 783.73 133.55 45.14 68.31 21.67 477.54 170.13 19.4
2.39 0.5 1.09 0.24 0.45 0.49 0.04 1.27 0.11 0.16 55.01 21.81 0.08 0.6 8.77 2.53 2.49 3.69 1.84 0.1 0.91 10.17 3.87 0.27 1.01 4.39 3.43 181.31 1.62 0.63 1.38 0.23 50.59 10.04 0.18
77.56 92.82 58.35 89.85 92.94 109.28 127.14 57.4 160.09 79.53 87.64 59.02 13.56 42.97 42.29 88.23 17.78 83.35 140.28 32.72 108.16 154.3 118.13 47.57 59.43 73.5 173.2 888.62 105.11 65.65 84.41 63.53 63.44 55.69 53.07
16.48 14.65 9.19 10.86 21.09 15.06 12.39 7.97 16.49 13.93 31.05 18.03 3.84 7.18 9.42 8.95 3.95 15.63 17.12 2.55 31.33 32.52 38.18 10.7 10.14 6.48 5.06 233.31 27.23 13.81 10.51 18.37 19.38 22.04 21.77
68.87 19.6 28.13 2.65 37.69 25.71 0.08 5.43 24.52 17.45 112.46 65.55 0.0 29.73 104.53 22.09 92.51 21.76 14.63 3.94 42.89 113.82 38.19 17.08 15.44 0.0 0.0 348.28 7.0 15.31 24.53 3.96 42.62 29.92 21.09
23.88 18.28 26.4 15.66 39.16 11.34 10.35 34.1 13.37 15.24 307.47 185.77 47.49 63.4 66.96 61.48 33.99 74.17 66.91 31.03 99.7 125.62 77.97 25.47 41.74 90.16 80.0 763.32 105.92 36.05 48.7 39.27 125.68 134.54 185.67
8.25 10.95 13.5 8.18 18.9 9.31 5.32 12.5 6.74 8.47 123.15 52.55 35.4 3.26 50.99 74.21 27.16 27.0 29.98 48.14 26.05 41.33 32.62 5.99 29.57 21.31 5.29 179.0 5.42 14.87 14.93 10.87 35.64 17.44 4.44
0.78 1.72 0.85 2.42 2.31 1.13 2.04 2.38 3.12 6.56 23.4 12.38 1.58 2.72 0.39 4.74 0.97 4.53 4.34 2.77 0.66 1.17 2.36 0.66 0.06 1.76 1.55 127.2 5.02 0.59 0.65 0.0 14.08 1.11 0.69
1371.06 447.24 1492.47 265.79 565.94 1502.31 26.47 929.71 816.5 344.82 2503.75 1581.31 59.43 91.34 990.11 1101.16 1356.43 470.98 648.81 95.93 196.98 534.83 320.15 254.74 171.71 1469.0 783.87 2621.33 357.77 152.93 343.08 10.75 1183.39 1835.72 213.79
524.18 419.06 537.47 441.4 77.49 390.99 255.47 206.13 560.61 460.81 384.75 167.49 83.19 22.95 116.19 539.61 110.4 269.43 247.96 81.32 33.14 89.59 81.6 83.39 69.05 271.97 108.26 1259.56 313.6 35.27 93.18 2.77 159.01 235.08 49.18
24.35 23.98 16.94 18.74 18.29 15.11 21.27 10.72 24.84 30.32 19.92 22.16 12.8 13.18 9.0 13.2 3.51 15.57 11.71 12.07 36.78 73.63 43.71 9.53 9.14 4.0 2.9 175.68 15.21 6.97 6.77 7.4 24.65 23.5 32.43
53.39 22.25 23.54 6.03 11.68 15.93 0.95 17.21 22.79 16.22 317.09 97.69 16.37 4.1 113.12 210.92 53.92 20.43 40.79 15.88 71.78 105.77 68.4 63.43 73.48 73.71 58.05 367.67 42.35 15.19 30.39 3.29 98.14 104.71 166.22
9.77 12.75 11.44 17.24 10.48 9.8 18.24 10.29 14.54 18.33 83.13 36.88 6.82 8.59 7.37 12.87 2.09 30.63 15.57 11.24 11.24 22.25 7.88 12.39 3.37 7.91 3.72 237.43 7.13 7.29 5.61 5.9 60.62 13.6 51.96
3.76 6.37 2.46 4.0 26.65 1.39 1.67 3.48 6.01 1.94 282.15 64.56 0.09 4.31 27.68 25.88 8.25 12.49 45.06 0.56 26.13 69.99 33.69 1.14 46.42 2.51 3.95 953.46 25.64 3.06 6.55 1.32 44.74 133.05 101.04
21.68 13.64 12.54 4.71 27.0 17.6 3.26 20.62 13.28 15.89 169.61 67.36 95.81 85.31 24.89 30.37 31.57 28.21 31.35 19.19 10.75 30.57 14.61 34.99 33.63 20.43 63.54 154.85 61.65 61.2 63.34 46.87 41.98 64.93 113.09
17.72 6.54 29.56 7.45 9.66 3.62 1.65 12.04 15.33 6.37 146.64 81.75 7.9 0.77 116.85 57.85 13.74 28.46 22.89 16.39 35.27 117.79 33.47 12.87 8.86 82.14 38.31 339.07 5.86 14.71 27.0 4.52 62.47 133.78 9.02
220.51 149.43 194.94 111.95 64.51 140.41 52.02 99.68 153.49 178.3 191.64 87.18 13.19 64.63 135.03 317.35 71.3 106.87 143.54 32.44 67.07 96.93 85.19 94.19 41.35 103.84 70.52 460.99 156.35 71.01 107.8 44.87 80.82 158.51 9.83
30.76 37.61 23.44 30.56 19.89 14.68 26.67 47.94 27.58 35.53 80.79 33.69 10.41 14.51 43.04 51.58 74.55 29.38 37.64 17.83 8.3 17.14 6.81 11.47 7.73 27.31 21.13 149.91 35.29 20.12 27.57 6.11 40.68 65.33 34.05
47.8 47.62 85.4 63.23 27.83 29.49 21.76 110.77 55.06 22.97 143.16 21.71 10.98 12.54 125.07 144.03 110.01 35.83 63.93 2.17 15.73 49.06 23.1 13.74 10.73 90.8 40.12 326.31 18.99 19.72 33.81 10.59 36.16 101.98 30.51
5.84 5.18 2.51 2.83 11.44 0.81 0.0 4.62 1.15 0.0 380.04 97.48 3.82 12.08 193.63 18.33 45.46 9.52 6.15 3.92 28.16 153.01 43.49 4.15 18.94 334.87 311.62 4081.62 23.77 30.39 92.28 2.89 444.85 113.57 120.22
18.07 18.57 15.96 18.1 41.02 13.63 26.53 26.01 36.56 15.83 215.13 106.42 37.53 56.27 80.39 34.35 65.69 28.3 26.56 43.65 32.61 93.23 46.35 37.54 82.02 271.47 364.54 896.36 126.14 92.91 166.97 46.31 191.64 135.13 371.42
14.08 19.61 16.99 22.21 18.47 13.35 24.66 14.45 22.14 17.72 124.46 52.88 1.64 10.02 18.09 24.65 20.3 16.71 28.02 7.06 18.75 66.0 21.72 15.77 7.4 64.16 131.82 111.85 11.27 32.53 41.43 32.29 39.07 48.03 5.87
6.91 2.11 8.62 1.83 3.6 3.52 0.56 10.52 1.75 2.49 42.98 15.09 0.82 0.51 5.33 3.16 2.29 2.9 6.21 2.78 11.86 31.84 5.42 10.25 5.05 13.0 25.16 52.6 4.37 9.14 7.38 10.17 14.3 34.5 1.33
14.94 12.15 13.17 12.01 21.28 6.93 3.53 20.92 13.72 11.92 237.92 59.87 59.84 12.77 21.73 36.77 6.76 31.47 54.73 31.68 25.52 50.39 26.8 42.08 80.09 28.71 98.23 254.97 87.66 39.01 53.7 19.98 69.33 49.17 124.59
30.04 37.92 57.94 61.73 117.74 28.28 49.58 11.98 111.93 51.88 127.56 86.12 230.6 25.09 73.29 69.61 44.41 93.65 48.15 117.19 108.43 174.45 211.71 46.53 83.83 111.74 33.45 904.38 65.11 25.49 40.72 22.19 133.39 42.46 30.26
29.19 27.01 17.24 19.96 47.12 28.57 26.02 13.16 39.77 36.49 49.36 30.26 2.81 11.43 23.54 13.54 18.53 26.11 35.91 24.15 58.24 80.77 88.69 11.2 6.04 1.98 1.68 271.16 12.53 8.92 9.65 8.55 29.43 19.88 1.9
28.31 27.8 27.85 24.92 21.84 9.88 22.16 45.72 32.02 24.75 126.75 136.11 72.71 75.73 16.39 35.21 11.94 34.98 84.85 5.06 28.81 166.09 65.37 7.63 9.01 114.97 93.36 1122.21 39.85 5.97 5.18 10.31 107.61 46.96 20.11
0.83 1.21 0.29 0.44 4.06 0.44 0.95 1.22 0.34 0.58 44.47 14.45 0.49 2.19 4.59 0.2 1.36 39.52 99.8 0.02 2.26 10.37 0.66 2.1 0.48 0.33 0.06 722.23 2.03 1.46 0.11 2.93 0.53 24.11 0.26
2.48 3.22 3.4 6.25 21.24 5.82 16.73 4.92 5.38 6.99 83.04 36.58 1.64 71.96 2.72 0.48 0.87 30.74 8.86 0.38 41.89 48.3 47.81 5.13 3.7 2.56 5.55 572.72 54.23 8.32 2.79 17.01 16.88 7.1 32.38
0.25 0.4 0.08 0.0 1.42 0.09 0.0 2.08 0.09 0.2 101.33 28.26 0.29 2.64 0.49 0.73 0.67 0.19 0.21 0.12 0.61 5.61 0.0 0.77 0.26 5.41 5.73 214.76 5.56 0.97 0.0 1.22 5.04 16.86 3.0
964.14 378.7 1349.47 592.2 34.79 444.94 448.62 811.01 593.0 327.97 871.82 530.97 71.49 98.44 21.04 559.49 8.61 232.89 226.89 13.52 71.88 93.5 165.33 46.03 31.07 262.4 163.17 2697.97 649.53 59.03 54.23 72.62 198.85 977.13 2.84
64.62 70.56 41.62 44.02 63.04 69.29 58.55 30.86 127.03 121.23 114.19 124.78 63.52 125.14 33.71 56.22 26.47 67.01 56.5 13.09 24.76 46.99 47.84 30.78 30.39 21.39 12.64 353.69 49.75 16.13 23.59 15.11 132.58 95.31 36.0
33.17 35.94 21.06 15.53 7.49 15.44 3.51 34.35 14.21 12.88 181.16 47.5 8.24 0.99 10.6 38.38 14.11 13.29 22.8 3.23 5.33 29.42 15.35 3.79 6.06 21.26 11.6 446.87 16.86 4.04 9.14 1.11 41.52 60.15 10.67
30.29 31.57 27.5 33.54 48.03 28.88 35.8 20.2 57.31 46.98 90.15 54.11 43.48 50.32 33.01 44.19 34.98 65.62 59.62 32.69 11.22 55.48 16.74 19.95 26.6 51.21 48.34 349.14 73.6 27.76 36.5 27.78 52.36 83.13 22.45
9.72 13.06 8.05 12.41 18.81 16.42 14.33 18.08 15.85 15.35 71.45 35.0 6.87 18.94 8.93 11.48 9.25 20.57 18.0 5.58 14.7 39.74 23.0 8.99 4.67 2.73 4.54 171.34 20.95 20.63 10.33 29.54 19.21 17.07 13.11
27.77 18.76 15.34 8.13 7.65 9.3 1.88 10.15 9.41 7.88 129.66 79.65 7.11 0.75 22.75 27.66 11.45 9.08 11.38 2.69 18.04 27.36 14.28 4.92 3.4 12.06 9.4 141.33 6.11 5.78 11.08 1.95 42.81 66.94 12.15
8.11 6.29 7.08 4.37 23.1 2.86 2.72 14.95 7.52 3.31 872.86 204.87 5.57 19.88 73.62 37.83 63.36 15.75 31.59 14.02 174.4 490.79 231.49 24.63 67.0 32.93 24.47 1259.11 80.1 30.53 67.12 16.02 249.18 173.25 64.73
32.59 23.68 28.34 22.59 23.88 25.02 18.9 16.03 34.55 37.69 85.78 64.75 7.19 30.4 27.03 41.35 9.97 59.97 56.8 28.37 36.13 48.47 38.22 40.19 35.63 29.52 41.51 168.73 73.76 51.73 45.28 53.75 62.46 26.17 37.22
36.27 35.05 43.35 44.24 24.08 19.92 22.94 29.62 32.2 30.92 120.4 27.53 101.77 45.88 16.67 41.03 18.69 41.01 42.09 18.81 19.47 35.53 21.24 36.68 41.83 16.79 21.93 227.8 97.31 65.19 41.86 82.33 12.91 45.68 7.86

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)