Heatmap: Cluster_213 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	CCAC0055	CCAP34/8,15mM NO3	CCAP34/8,2mM NO3	JNU35	NIES-144,High light 12h	NIES-144,High light 24h	NIES-144,High light 48h	NIES-144,High light 6h	NIES-144,High light 72h	NIES-144,Homothallic	NIES-144,Low light 12h	NIES-144,Low light 24h	NIES-144,Low light 48h	NIES-144,Low light 6h	NIES-144,Low light 72h	Strain 121	Strain 712	Strain 712,25mg/L Jasmonic acid 1h	Strain 712,25mg/L Jasmonic acid 24h	Strain 712,25mg/L Jasmonic acid 6h	Strain 712,25mg/L Salicyclic acid 1h	Strain 712,25mg/L Salicyclic acid 24h	Strain 712,No jasmonic and salicyclic acid	Vegetative	ZY-18,Motile	ZY-18,Motile to non-motile
lcl\|BLLF01000165.1_cds_GFH08502.1_2979 (GFH08502)	-0.75	-	-	0.16	-1.99	1.15	-1.36	0.58	-3.07	-	0.18	0.69	0.63	0.38	-3.09	-	0.76	-0.17	0.42	-0.4	0.29	0.49	2.14	0.18	-0.7	-0.68
lcl\|BLLF01000232.1_cds_GFH09413.1_3890 (GFH09413)	-	-	-	1.96	0.37	-0.63	-	-	2.32	-	0.49	0.35	0.53	0.8	1.32	-	-	-	-	-	-	-	-	1.86	1.09	0.1
lcl\|BLLF01000236.1_cds_GFH09470.1_3947 (GFH09470)	-	-	-	-	-	-	1.18	1.61	2.45	-	1.84	1.15	0.24	1.16	-	-	-	-	-	-	-	-	-	1.18	1.9	-
lcl\|BLLF01000422.1_cds_GFH11644.1_6121 (GFH11644)	-	-	-	-	-	-	2.11	-	3.07	-	2.13	2.11	2.19	-	-	-	-	-	-	-	-	-	-	-	-	-
lcl\|BLLF01000426.1_cds_GFH11687.1_6164 (GFH11687)	-	-	-	-	-	-	-	-	4.7	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
lcl\|BLLF01000428.1_cds_GFH11714.1_6191 (GFH11714)	-	-	-	-	-	-	-	2.09	1.18	-	2.35	2.21	2.89	1.22	-	-	-	-	-	-	-	-	-	-	-	-
lcl\|BLLF01000507.1_cds_GFH12478.1_6955 (GFH12478)	-	-	-	-	-0.47	1.12	0.72	1.48	-0.51	-	-0.46	-	-	-	-0.54	-	-	2.38	-	-	2.84	-	-	0.81	-	1.28
lcl\|BLLF01000518.1_cds_GFH12594.1_7071 (GFH12594)	-	-	-	-	-	-	-	-	2.15	-	-	2.19	2.27	2.19	-	-	-	-	-	-	-	-	-	-	2.93	-
lcl\|BLLF01000604.1_cds_GFH13365.1_7842 (GFH13365)	-	-	-	-	-	-	1.06	0.71	0.82	-	-	-	-	1.02	2.4	-	-	-	-	-	-	-	-	2.82	-	2.62
lcl\|BLLF01000618.1_cds_GFH13484.1_7961 (GFH13484)	-	-	-	2.1	-	-	0.49	0.34	2.46	3.21	-	-	1.57	0.35	-	-	-	-	-	-	-	-	-	-	-	-
lcl\|BLLF01000627.1_cds_GFH13558.1_8035 (GFH13558)	-	1.0	-	-1.08	1.19	0.48	0.51	0.99	-0.09	-	1.53	0.92	1.57	0.43	1.19	-	-	-	-	-	0.1	-	-	0.15	0.68	-1.47
lcl\|BLLF01000650.1_cds_GFH13768.1_8245 (GFH13768)	-0.87	-	-	0.04	1.13	0.05	0.35	0.17	0.98	-0.43	0.94	0.02	0.82	0.42	1.27	-	-	1.29	-	-	-	0.37	-	1.12	0.18	-0.8
lcl\|BLLF01000680.1_cds_GFH14046.1_8523 (GFH14046)	-0.97	-	-	1.12	0.14	1.47	-0.33	-0.17	0.03	0.47	0.74	-0.07	-0.24	0.42	0.03	-0.04	-0.47	0.61	-	-0.63	-	-	1.18	0.13	-0.19	0.51
lcl\|BLLF01000687.1_cds_GFH14114.1_8591 (GFH14114)	-	-	-	-	-1.84	-1.87	1.2	1.02	1.89	-	1.2	0.12	1.12	1.13	0.66	-	-	-	-	-	-	-	-	2.0	1.18	0.88
lcl\|BLLF01000724.1_cds_GFH14421.1_8898 (GFH14421)	-	-	-	1.51	1.15	0.32	0.32	0.23	0.28	-	-1.66	-0.69	0.72	-0.09	-0.15	-	1.1	1.17	-	-	-	1.84	-	0.64	0.06	0.07
lcl\|BLLF01000980.1_cds_GFH16328.1_10805 (GFH16328)	-	-	-	-	-	1.51	1.49	1.36	0.45	-	0.5	0.48	2.61	1.49	-	-	-	-	-	-	-	-	-	-	1.22	1.23
lcl\|BLLF01001014.1_cds_GFH16558.1_11035 (GFH16558)	-	-	-	-	-	-	1.78	-	-	-	-	3.35	-	1.77	1.72	-	-	-	-	-	-	-	-	-	2.51	-
lcl\|BLLF01001040.1_cds_GFH16708.1_11185 (GFH16708)	-	-	-	-	0.78	1.7	1.46	-1.8	0.58	0.01	0.96	-0.11	1.27	0.35	-0.41	-	-	-	-	-0.08	0.62	-	-	-1.77	0.62	1.96
lcl\|BLLF01001054.1_cds_GFH16814.1_11291 (GFH16814)	-	-	-	-0.52	0.6	1.48	0.11	0.78	1.36	-	1.22	0.97	0.26	0.28	0.53	-	-0.34	-0.27	-	-	-	0.4	-	-0.55	0.61	1.22
lcl\|BLLF01001078.1_cds_GFH16978.1_11455 (GFH16978)	-	-0.98	-	1.05	-0.24	-0.12	0.58	0.13	1.07	0.99	0.14	0.15	0.58	-0.19	-0.06	-	0.91	0.17	0.72	-1.1	-0.4	-1.14	-0.29	-0.4	-0.4	-0.38
lcl\|BLLF01001155.1_cds_GFH17484.1_11961 (GFH17484)	-	-	-	-	-	2.45	-	1.33	-	-	1.44	2.42	1.53	-	1.4	-	-	-	-	-	-	-	-	-	2.16	-
lcl\|BLLF01001180.1_cds_GFH17638.1_12115 (GFH17638)	-	-	-	1.75	0.17	0.15	1.8	0.05	1.68	2.85	-	1.17	-	1.69	-	-	-	-	-	-	-	-	-	-	-	-
lcl\|BLLF01001203.1_cds_GFH17802.1_12279 (GFH17802)	-	-	-	-	1.27	1.68	0.76	-0.5	2.42	-	2.37	-0.36	0.73	1.93	-0.41	-	-	-	-	-	-	-	-	-1.1	-	-
lcl\|BLLF01001356.1_cds_GFH18782.1_13259 (GFH18782)	-	-	-	-	0.16	1.15	1.72	2.06	-	1.73	-	1.15	0.26	1.26	1.11	-	-	-	-	-	-	-	-	-2.46	0.89	0.91
lcl\|BLLF01001398.1_cds_GFH19044.1_13521 (GFH19044)	-	-	-	-	1.4	-4.24	-2.09	0.19	-0.86	-	1.4	2.04	0.15	-1.9	1.44	-	-	-	-	0.88	-	2.78	-	-2.57	-0.62	0.02
lcl\|BLLF01001417.1_cds_GFH19169.1_13646 (GFH19169)	-	-	-	-	2.77	-	2.75	-	2.69	-	-	-	-	2.59	-	-	-	-	-	-	-	-	-	-	-	-
lcl\|BLLF01001483.1_cds_GFH19552.1_14029 (GFH19552)	-	-	-	-	2.75	0.75	0.73	2.66	1.7	-	-	-	1.83	-	-	-	-	-	-	-	-	-	-	-	-	1.49
lcl\|BLLF01001534.1_cds_GFH19877.1_14354 (GFH19877)	-	-	-	-	1.27	0.94	-0.65	1.2	1.5	-	-1.06	0.0	-	-	-0.13	-	-	2.78	-	-	2.25	-	-	-1.83	0.67	-
lcl\|BLLF01001599.1_cds_GFH20234.1_14711 (GFH20234)	-	-	-	-	2.55	-	1.52	1.36	3.06	-	-	0.5	-	-	2.06	-	-	-	-	-	-	-	-	-0.25	-	-
lcl\|BLLF01001684.1_cds_GFH20710.1_15187 (GFH20710)	-	-	-	-	1.73	0.96	1.74	-0.65	-	-	-0.61	0.96	1.04	0.38	0.34	-	-	-	-	-	-	2.9	-	1.06	-	-
lcl\|BLLF01001767.1_cds_GFH21130.1_15607 (GFH21130)	-	-	-	-	1.37	-	-	2.31	3.3	-	-	-	1.46	-	1.32	-	-	-	-	-	-	-	-	1.73	-	-
lcl\|BLLF01001803.1_cds_GFH21306.1_15783 (GFH21306)	-	-	-	-	-	-	-	2.73	3.07	-	1.83	-	2.9	-	-	-	-	-	-	-	-	-	-	-	-	-
lcl\|BLLF01001947.1_cds_GFH22001.1_16478 (GFH22001)	-	-	-	-	-	2.75	1.72	-	-	-	1.75	2.73	-	2.59	-	-	-	-	-	-	-	-	-	-	-	-
lcl\|BLLF01002199.1_cds_GFH23131.1_17608 (GFH23131)	-	-	-	-	3.32	1.74	-	1.67	3.25	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
lcl\|BLLF01002234.1_cds_GFH23277.1_17754 (GFH23277)	-	-	-	-	1.59	1.72	1.09	1.97	-0.78	-	0.39	0.58	1.15	0.82	1.8	-	-	-	-	-	-	-	-	-0.39	-1.01	0.6
lcl\|BLLF01002452.1_cds_GFH24133.1_18610 (GFH24133)	-1.04	-	-	-	-	0.86	-0.74	-0.43	-	-	0.11	1.01	0.65	0.4	-0.03	0.89	0.46	-	-	2.3	1.0	-	1.53	0.75	-0.58	-
lcl\|BLLF01002462.1_cds_GFH24171.1_18648 (GFH24171)	-	-	-	1.79	0.2	-	-	1.1	2.73	-	0.21	-	1.26	2.4	0.13	-	-	-	-	-	-	-	-	1.42	-	-
lcl\|BLLF01002549.1_cds_GFH24490.1_18967 (GFH24490)	-	-	-	-	0.51	1.98	1.41	-1.8	1.63	-	1.54	1.11	1.83	1.03	0.76	-	-	-	-	-	-	-	-	-	-5.24	1.14
lcl\|BLLF01002616.1_cds_GFH24724.1_19201 (GFH24724)	-0.69	-	-	-	-0.35	-0.37	0.73	-0.4	-0.98	-1.6	0.96	1.03	0.8	0.4	-5.11	-	-	1.89	-	0.65	1.45	1.55	-	0.75	-	-0.19
lcl\|BLLF01002650.1_cds_GFH24851.1_19328 (GFH24851)	0.96	1.24	-	-1.18	-	-3.59	-2.04	0.07	0.57	-	0.37	0.41	0.96	0.07	0.8	-	1.87	0.4	-	-	-	-	1.49	-3.52	0.91	0.36
lcl\|BLLF01002757.1_cds_GFH25234.1_19711 (GFH25234)	-	-	-	-	3.46	-	-	2.28	2.39	-	-	-	-	2.29	-	-	-	-	-	-	-	-	-	-	-	-
lcl\|BLLF01002928.1_cds_GFH25819.1_20296 (GFH25819)	-	-	-	-	-	2.36	0.54	0.25	-	3.06	1.36	2.36	-	-	-	-	-	-	-	-	-	-	-	-	-	1.11
lcl\|BLLF01003048.1_cds_GFH26180.1_20657 (GFH26180)	-	-	-	-	-	-	-	-	-	-	-	4.7	-	-	-	-	-	-	-	-	-	-	-	-	-	-
lcl\|BLLF01003146.1_cds_GFH26492.1_20969 (GFH26492)	-	-	-	-	-	-	-	-	-	-	-	4.7	-	-	-	-	-	-	-	-	-	-	-	-	-	-
lcl\|BLLF01003193.1_cds_GFH26652.1_21129 (GFH26652)	2.18	-	-	3.16	1.64	-	-	-	2.08	-	-	1.57	-	-	-	-	-	-	-	-	-	-	-	1.14	-	-
lcl\|BLLF01003248.1_cds_GFH26810.1_21287 (GFH26810)	-	-	-	3.17	-0.92	-	0.55	1.45	1.8	-	1.46	-	1.72	1.11	-	-	-	-	-	-	-	-	-	-0.77	-	-
lcl\|BLLF01003290.1_cds_GFH26925.1_21402 (GFH26925)	-	-	-	1.62	2.04	-	1.02	1.93	2.44	-	-0.74	-	0.69	0.66	-0.03	-	-	-	-	-	-	-	-	0.92	-	-0.23
lcl\|BLLF01003891.1_cds_GFH28470.1_22947 (GFH28470)	-	-	-	-	-	-	-	3.07	3.19	-	-	-	-	3.08	-	-	-	-	-	-	-	-	-	-	-	-
lcl\|BLLF01003895.1_cds_GFH28481.1_22958 (GFH28481)	-	-	-	-	0.57	1.3	0.62	-	1.24	-	1.29	-0.02	1.4	1.0	-1.1	-	-	-3.42	-	2.58	-	-	-	-1.79	0.69	0.71
lcl\|BLLF01004005.1_cds_GFH28716.1_23193 (GFH28716)	-1.24	-	-	-	-1.48	1.16	-0.16	0.56	-	-	0.16	-2.52	-2.25	-0.43	-0.98	0.7	0.27	-	-	1.1	1.8	-	2.33	1.02	0.81	-0.76
lcl\|BLLF01004043.1_cds_GFH28801.1_23278 (GFH28801)	1.08	-	-	-	1.42	0.83	1.25	-0.23	1.76	-	-0.07	-1.2	-0.93	0.34	-0.24	-	-	-	-	1.43	-	-	-	-0.07	1.54	1.15
lcl\|BLLF01004220.1_cds_GFH29179.1_23656 (GFH29179)	-	-	-	-	-	-	-	-	-	-	-	4.59	-	-	-	-	-	-	-	-	-	-	-	0.95	-	-
lcl\|BLLF01004280.1_cds_GFH29299.1_23776 (GFH29299)	-	-	-	-	-	-	-	-	3.75	-	-	-	-	3.65	-	-	-	-	-	-	-	-	-	-	-	-
lcl\|BLLF01004382.1_cds_GFH29497.1_23974 (GFH29497)	-17.73	-	-	-	0.77	-	1.84	0.89	-	-	-	-2.31	0.04	1.48	1.46	-	2.39	-	-	-	-	-	2.77	-	-	-
lcl\|BLLF01004449.1_cds_GFH29634.1_24111 (GFH29634)	-	-	-	-	3.22	-	-	3.06	-	-	-	-	-	3.07	-	-	-	-	-	-	-	-	-	-	-	-
lcl\|BLLF01004497.1_cds_GFH29728.1_24205 (GFH29728)	0.16	-	-	-	1.72	0.9	0.47	1.13	-1.15	1.6	-0.1	1.22	0.56	0.93	-1.18	-	-	-	-	-	-	2.4	-	-1.73	-	-
lcl\|BLLF01004787.1_cds_GFH30245.1_24722 (GFH30245)	-	-	-	-	1.3	1.31	1.34	-0.34	1.97	-	-0.07	0.68	1.83	0.62	0.64	-	-	-	-	-	-	-	-	2.19	-	-
lcl\|BLLF01005231.1_cds_GFH30917.1_25394 (GFH30917)	-	-	-	-	-0.68	1.12	1.18	1.39	-0.73	-	1.87	1.13	2.52	1.17	0.58	-	-	-	-	-	-	-	-	0.44	-0.95	-0.94
lcl\|BLLF01005486.1_cds_GFH31254.1_25731 (GFH31254)	-	-	-	-	2.12	1.71	0.21	1.82	2.38	-	1.92	-	-0.82	0.18	1.05	-	-	-	-	-	-	-	-	-	-	-0.13
lcl\|BLLF01007094.1_cds_GFH32765.1_27242 (GFH32765)	-	-	-	-	2.04	2.03	-	2.36	1.98	-	0.45	-	-	1.59	0.39	-	-	-	-	-	-	-	-	-0.33	1.17	-
lcl\|BLLF01008020.1_cds_GFH33220.1_27697 (GFH33220)	-	-	-	-	2.71	-	1.83	0.14	0.78	-	1.87	2.23	-0.5	0.39	-	-	-	-	-	-	-	-	-	-0.46	-	0.98
lcl\|BLLF01008253.1_cds_GFH33306.1_27783 (GFH33306)	2.45	-	-	-	-	-	1.17	1.15	-	-	2.2	3.17	1.29	-	-	-	-	-	-	-	-	-	-	-	-	-
lcl\|BLLF01008432.1_cds_GFH33378.1_27855 (GFH33378)	-	-	-	-	2.11	-	-	-	-	-	-	3.58	-	-	-	-	-	-	-	-	-	-	2.83	1.38	-	-
lcl\|BLLF01008599.1_cds_GFH33444.1_27921 (GFH33444)	-	-	-	-	-	-	-	0.79	2.49	-	1.19	-	1.02	-	1.91	-	-	-	-	-	-	-	-	2.88	-	1.7
lcl\|BLLF01009465.1_cds_GFH33731.1_28208 (GFH33731)	-	-	-	-	-	-	-	-0.97	3.19	-	2.47	-	-	-	2.19	-	-	-	-	-	-	-	-	2.64	-	-

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.