Heatmap: Cluster_210 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
CCAC0055
CCAP34/8,15mM NO3
CCAP34/8,2mM NO3
JNU35
NIES-144,High light 12h
NIES-144,High light 24h
NIES-144,High light 48h
NIES-144,High light 6h
NIES-144,High light 72h
NIES-144,Homothallic
NIES-144,Low light 12h
NIES-144,Low light 24h
NIES-144,Low light 48h
NIES-144,Low light 6h
NIES-144,Low light 72h
Strain 121
Strain 712
Strain 712,25mg/L Jasmonic acid 1h
Strain 712,25mg/L Jasmonic acid 24h
Strain 712,25mg/L Jasmonic acid 6h
Strain 712,25mg/L Salicyclic acid 1h
Strain 712,25mg/L Salicyclic acid 24h
Strain 712,No jasmonic and salicyclic acid
Vegetative
ZY-18,Motile
ZY-18,Motile to non-motile
- - - - - - - 1.07 2.06 - - - - - 3.64 - - - - - - - - - 1.85 1.85
-1.2 - - - 0.35 -0.53 -0.31 -1.81 0.29 0.54 - -0.67 0.07 -2.09 -1.15 2.13 - 2.14 - - 0.94 - 1.17 -0.2 0.92 0.79
- - - 0.48 - - - - 0.85 - 0.23 - 1.7 0.89 - 2.46 - 3.46 - - - - - - - -
- 0.81 0.17 1.39 0.78 0.68 1.5 -2.19 1.81 - -1.65 -1.27 1.08 -0.01 1.66 - - - - - - - - 1.64 -0.92 -
- - - - 0.23 1.22 1.21 0.1 - - 1.87 - 1.88 1.79 - - - 3.05 - - - - - - - -
- - - 3.15 0.95 -0.59 - - -2.86 - 0.16 -0.77 -4.89 -0.1 2.03 - - - - - - - - -3.13 2.54 0.73
- - - - - - - - 3.15 - 2.61 - - - 2.57 - - - - - - - - - 2.34 -
- - - 2.78 - - 1.19 - - - - - - - 3.71 - - - - - - - - - - 1.92
- - - - -2.69 - -1.0 -1.21 - - -0.99 -0.81 -0.9 - 1.86 2.35 - 3.18 - - - - - -1.94 1.75 0.89
- - - - 2.12 - - - - - - -0.83 - 0.86 2.61 - - - - - - 3.22 - 1.95 - -
- - - - -1.86 -1.31 -2.9 - -1.34 -0.06 - -1.32 -0.43 - 0.89 2.72 - - 2.2 - - - -0.05 - 2.65 1.24
- - - 3.98 - - - - 2.34 - - - - - 2.35 - - - - - - - - - - -
1.45 - - - - - 1.8 0.36 2.44 - -0.28 - 0.65 - 3.25 - - - - - - - - - 0.22 -
- - - - 0.15 - 0.13 -0.99 -1.9 0.85 -0.19 -1.81 -0.6 -0.43 -1.91 2.35 - 0.99 - 0.75 1.45 - 0.98 -1.55 1.87 -0.12
- - - - - - - - -0.87 - 0.84 -1.1 -0.03 - - 3.07 - 3.25 - - - - - -3.92 2.08 -
- - - - 2.21 - 1.16 2.11 1.14 - - - - - 3.13 - - - - - - - - - - 1.94
- - - - 0.29 0.26 - - - - - - - - 3.72 - - - - 3.06 - - - - 1.05 -
0.47 - - -0.2 0.02 1.11 0.39 -0.91 0.74 1.5 0.24 -0.46 -0.71 -0.26 1.33 1.41 -0.02 - 0.64 - - - - -0.41 -2.06 1.12
- - - 1.52 0.94 -0.09 1.96 - 1.88 - 0.93 -0.1 1.64 - 2.21 - - - - - - - - -0.84 - 0.66
0.81 - - - -0.86 -0.13 -0.81 -0.99 0.31 1.25 -0.78 -1.47 -0.32 0.11 1.59 - 0.32 1.39 - 1.16 - - - -1.54 1.28 1.76
- - - 2.25 0.89 -1.35 -0.34 -0.01 0.72 -0.22 1.18 0.07 -0.02 0.28 1.03 - - - - - - - 0.91 -0.57 1.97 -0.6
0.98 - - 2.16 -0.54 -1.02 - - 0.51 - - - - 0.9 2.1 2.18 - - - - - - 1.81 0.98 - -0.29
-0.19 - - 2.47 -1.48 -1.3 -0.11 - 1.17 1.66 -2.33 - -0.03 0.1 1.68 1.58 - - - - -22.2 - 1.79 -0.82 - -
- - - 2.06 1.28 -0.04 -0.24 1.06 0.47 - 0.3 0.8 0.17 0.26 0.3 - - - -0.86 -1.68 - - - -0.5 1.02 2.01
- - - - - 1.83 - - 1.78 - - - 1.93 - 2.8 - - - - - - - - 1.23 2.56 -
-0.5 - - - -0.75 0.41 -0.45 - -0.81 - -0.09 -0.15 -1.68 -0.41 -2.83 1.44 1.01 2.67 - -0.15 0.55 - 0.07 0.66 1.43 -2.01
- - - - 0.35 - -1.97 1.43 -0.6 0.78 0.51 -2.1 1.01 -0.02 1.53 - 0.78 0.81 - 0.53 1.55 - - -0.16 -1.37 1.44
- - - - - - - 0.96 - - - 1.05 1.16 - 1.03 - - 3.91 - - - - - 1.45 - -
- - - 3.37 - - - - - - - - - 1.77 2.72 - - - - - - - - - 2.5 -
- - - - - - -0.83 -0.85 - 1.9 -0.8 -0.82 - - -0.84 2.4 - 2.04 - - - - - 0.59 2.73 0.94
- - - - 1.66 -0.71 -0.5 - 0.37 2.4 -0.11 - -0.61 0.53 2.51 -8.77 - - - - -14.87 - - -0.22 1.29 1.56
- - - - 1.13 - 2.21 - 1.08 - - 1.11 1.23 0.97 3.41 - - - - - - - - - - -
- - - - - - - - - - 2.5 - 2.6 2.34 2.46 - - - - - - - - 1.9 - -
- - - - - - - 0.65 3.02 - 2.34 - - - - - - - - - - - - - 1.48 3.08
-0.34 - - - 0.46 -1.87 - - 0.66 1.14 0.13 -1.83 -1.62 -2.03 -0.35 2.33 - 2.37 - 1.1 - - 0.96 -0.92 0.85 -1.14
- - - - - - - - 2.61 - - - - - 3.22 - - - - - - - - - - 3.4
-0.41 - - 2.24 -0.66 -1.67 1.72 - 1.45 - 0.7 -1.69 - - 1.87 - - - - - - - - -0.71 2.05 1.67
- - - - - - - - - - - - - - 4.7 - - - - - - - - - - -
- - - - - - - 1.96 - - -0.72 - -0.38 - - 3.95 - - - - - - - - 2.4 -
- - - 1.52 1.62 0.45 -0.38 0.84 0.02 - 1.14 0.67 -0.51 1.08 0.02 - - - - - - - -0.41 -0.68 1.73 1.5
- - - - - - - - - - - - - - 4.7 - - - - - - - - - - -
0.85 - - 1.18 - - -0.23 0.45 -0.46 - 2.21 0.57 0.65 0.73 1.12 - - - - - 2.9 - - - - -
- - - 3.7 - 1.13 2.11 - 2.15 - - - - - 1.07 - - - - - - - - - - -
- - - - 0.03 -0.99 - - 0.97 - 0.61 1.36 1.14 -1.13 1.94 - 1.79 - - - 2.33 - - - - 1.77
- - - - - - - 0.71 0.71 - - - - - 0.7 3.96 - - - - - - - - 2.48 -
- - - - - - - - - - - - - - 4.7 - - - - - - - - - - -
- - - - -0.49 1.33 - -0.14 1.44 - -1.03 0.72 - - 1.45 3.1 - - - - - - - 0.32 0.63 1.55
1.17 - - 0.86 -0.29 -0.74 0.21 -1.82 -0.17 1.03 0.03 -0.44 0.13 -0.51 1.87 - 1.0 0.38 - - - - - -0.64 1.66 0.89
- - - 3.38 2.37 - - 0.62 0.74 - - - - - 2.32 - - - - - - - - 1.15 - -
- - - - - - - - - - - - - - 4.7 - - - - - - - - - - -
- - - 2.68 1.08 - 1.09 - - - - - - - 3.04 - - - - - - - - - 1.81 1.84

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.