Heatmap: Cluster_204 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	CCAP211/11P,High light	CCAP211/11P,Low light	CPCC90,BBM,72h,Autotrophy	CPCC90,BBM,97h,Mixotrophy	CPCC90,BBM,98h,Mixotrophy	CPCC90,BBM,120h,Mixotrophy	CPCC90,BBM,144h,Heterotrophy	NJ-7,20C	NJ-7,4C	UTEX259,20C	UTEX259,4C
Transcript_contig_11031 (11031)	-0.27	0.25	0.46	-0.44	-0.54	0.33	1.62	0.25	-2.91	-2.61	-1.44
Transcript_contig_11851 (11851)	2.16	-	-	-	-	-	2.71	-	-	-	-
Transcript_contig_11986 (11986)	0.57	-2.88	-0.54	0.7	0.87	-0.0	2.03	-	-	-4.29	-3.26
Transcript_contig_11995 (11995)	0.68	-	0.47	-0.02	0.11	0.09	1.99	-0.11	-	-	-
Transcript_contig_1265 (1265)	1.94	-5.6	-3.88	-	-	-1.14	2.6	-	-	-1.2	-2.95
Transcript_contig_13845 (13845)	0.83	-1.63	-1.36	-0.65	-1.5	0.76	2.07	-0.35	-	-	-0.25
Transcript_contig_14105 (14105)	0.97	-	-	0.21	0.08	-0.94	2.66	-	-	-	-
Transcript_contig_18803 (18803)	0.61	-0.91	-0.18	-0.03	-0.92	1.3	1.66	-1.28	-	-1.26	-3.51
Transcript_contig_1978 (1978)	1.15	-0.82	-2.56	-1.91	-	-2.77	2.69	-1.55	-1.12	-3.53	-1.75
Transcript_contig_2051 (2051)	0.67	-0.54	-0.92	-0.28	-1.46	0.1	2.32	-1.41	-5.44	-	-0.9
Transcript_contig_2307 (2307)	1.12	-	-0.69	-0.56	-0.42	0.01	2.41	-	-1.4	-6.48	-3.69
Transcript_contig_23318 (23318)	0.17	-0.49	0.81	-0.45	1.31	-1.1	1.1	-0.18	-	-3.03	-0.82
Transcript_contig_25583 (25583)	0.58	-	0.91	1.43	0.51	-0.59	1.39	-	-2.82	-	-3.89
Transcript_contig_27061 (27061)	1.34	-7.46	-	-3.91	-4.29	-0.11	2.29	-4.72	-	0.63	-0.1
Transcript_contig_27632 (27632)	1.25	-	-	-	-	1.2	2.47	-	-	-	-0.39
Transcript_contig_27869 (27869)	-0.61	-	1.59	0.3	0.04	-0.2	2.07	-	-	-	-
Transcript_contig_3102 (3102)	-0.84	-	0.09	0.56	1.14	0.42	1.41	-	-4.56	-0.54	-0.03
Transcript_contig_31793 (31793)	0.82	0.4	0.46	-0.2	-0.72	-0.74	1.69	0.06	-	-3.39	-3.42
Transcript_contig_320 (320)	0.39	-	-0.04	0.17	-0.24	0.34	2.32	-	-	-	-1.05
Transcript_contig_35239 (35239)	1.53	-4.85	-4.54	-4.39	-3.48	-1.01	2.78	-4.11	-	-	-1.11
Transcript_contig_3552 (3552)	0.42	-0.99	0.71	-0.05	0.13	-0.18	1.34	-0.47	0.32	-5.14	-4.04
Transcript_contig_53875 (53875)	1.32	-0.06	-7.69	-7.61	-5.03	0.4	2.34	-0.17	-6.29	-2.52	-5.57
Transcript_contig_54356 (54356)	0.63	-2.35	-2.02	-1.08	-1.39	0.71	2.27	-2.58	-0.1	-1.88	-1.56
Transcript_contig_54696 (54696)	0.87	-1.02	-1.81	-1.62	-1.44	0.58	1.68	-1.01	-1.96	0.52	-0.3
Transcript_contig_54744 (54744)	0.59	-0.72	-2.29	-2.47	-2.59	0.84	1.53	-1.35	-1.7	0.95	0.06
Transcript_contig_54848 (54848)	1.15	-0.17	-1.78	-1.48	-1.42	-0.38	2.22	-0.02	-4.01	-1.96	-2.8
Transcript_contig_55951 (55951)	0.69	-0.44	0.27	0.47	0.23	-0.32	1.77	-0.87	-	-3.46	-4.88
Transcript_contig_56117 (56117)	0.68	0.07	-1.26	-0.38	-0.36	0.09	1.77	-0.35	-1.57	-1.08	-1.66
Transcript_contig_56799 (56799)	1.14	-6.45	-4.47	-4.48	-4.34	0.05	2.09	-5.91	-1.32	0.81	0.25
Transcript_contig_5759 (5759)	0.4	-	-	-	-	0.97	2.95	-	-	-	-
Transcript_contig_5762 (5762)	0.54	-0.64	0.47	0.28	-0.51	-0.32	1.77	-0.26	-0.83	-	-
Transcript_contig_57682 (57682)	1.56	-	-3.99	-3.36	-2.3	-2.08	2.85	-	-	-	-2.11
Transcript_contig_57901 (57901)	0.53	-2.6	-	-5.64	-5.63	1.37	1.75	-1.57	-2.14	0.84	0.06
Transcript_contig_58972 (58972)	0.26	-0.8	-0.96	0.09	0.16	0.54	1.35	-0.31	-2.29	0.11	-1.2
Transcript_contig_59403 (59403)	0.77	-0.43	-1.27	-0.5	0.19	0.13	1.94	-0.9	-2.24	-1.89	-1.51
Transcript_contig_60277 (60277)	-0.21	-	0.26	0.07	1.4	1.05	1.4	-	-0.88	-	-
Transcript_contig_60308 (60308)	0.46	-2.76	-0.03	-0.07	1.65	0.34	1.52	-	-	-1.87	-
Transcript_contig_60969 (60969)	0.33	-2.87	0.57	0.54	0.61	-0.76	2.1	-	-	-	-1.97
Transcript_contig_61014 (61014)	0.89	-3.41	0.49	-0.06	-1.24	0.5	2.02	-1.67	-1.24	-3.65	-
Transcript_contig_61033 (61033)	0.66	-	-	0.8	1.72	-	1.89	-	-	-0.56	-
Transcript_contig_61042 (61042)	0.4	-1.12	0.6	-	-0.17	-0.19	2.57	-	-	-	-
Transcript_contig_61062 (61062)	0.34	0.49	0.89	0.62	1.51	-0.83	0.61	-	-	-	-
Transcript_contig_61473 (61473)	0.39	-1.49	1.24	0.94	1.0	-1.13	1.22	-1.92	-	-	-
Transcript_contig_61535 (61535)	-0.41	-1.74	-0.09	0.41	0.68	0.42	1.09	-2.82	-0.78	-0.59	0.28
Transcript_contig_61685 (61685)	0.43	-	0.63	-0.44	-0.72	-0.74	2.54	-	-	-	-1.59
Transcript_contig_61710 (61710)	0.52	-	0.73	0.24	-0.04	-0.06	2.26	-	-	-	-
Transcript_contig_62355 (62355)	0.31	-0.84	-0.05	0.41	1.7	-0.84	1.02	-0.62	-	-	-1.27
Transcript_contig_67054 (67054)	2.16	-	-	-	-	-	2.71	-	-	-	-
Transcript_contig_67721 (67721)	1.4	-0.9	-	-0.19	-0.43	-1.24	1.88	-0.63	-	0.07	-1.33
Transcript_contig_68259 (68259)	0.71	-0.32	0.06	0.17	0.15	-0.77	1.31	-1.39	-	0.7	-2.28
Transcript_contig_68475 (68475)	1.14	-	-	-	1.25	-0.77	2.4	-	-	-0.82	-
Transcript_contig_72564 (72564)	1.02	-2.37	-1.49	-0.14	-1.74	0.18	2.59	-	-	-4.92	-5.17
Transcript_contig_75348 (75348)	1.26	-	0.07	-1.28	-1.49	-2.77	2.21	-	-	0.35	-0.48
Transcript_contig_76469 (76469)	0.89	-	0.5	0.84	-0.85	-0.87	1.83	-	-	-0.38	-0.92
Transcript_contig_78045 (78045)	0.69	-5.45	-0.11	0.13	-0.05	0.98	1.96	-	-2.98	-3.27	-1.83
Transcript_contig_79045 (79045)	1.03	-3.11	-3.28	-3.15	-3.23	-0.07	1.8	-2.98	0.27	0.65	0.24
Transcript_contig_79526 (79526)	1.1	-	-1.13	-0.89	-0.23	0.77	2.4	-	-	-	-5.82
Transcript_contig_79879 (79879)	1.6	-1.97	-2.56	-1.96	-2.25	-1.18	2.43	-1.64	-6.42	-0.58	-2.02
Transcript_contig_80955 (80955)	-0.34	-1.32	0.44	0.56	0.23	0.58	1.97	-1.72	-	-	-3.37
Transcript_contig_8110 (8110)	1.15	-	-0.82	-0.42	0.31	0.16	2.32	-	-	-2.98	-
Transcript_contig_82724 (82724)	0.45	-0.55	-0.24	0.32	0.01	-0.3	1.83	-0.75	-0.35	-6.24	-3.47
Transcript_contig_89629 (89629)	0.58	-1.09	-1.0	0.27	0.07	0.31	2.12	-2.18	-6.43	-1.98	-2.29
Transcript_contig_90193 (90193)	-0.68	-	1.2	-2.28	1.75	1.07	1.27	-	-	-	-
Transcript_contig_90452 (90452)	-0.0	-1.47	-0.5	-0.17	1.14	0.13	1.93	-	-	-0.61	-1.83
Transcript_contig_90465 (90465)	1.21	-	0.83	0.05	-1.26	-0.06	2.17	-	-	-	-
Transcript_contig_90565 (90565)	0.66	-	0.37	1.03	0.22	-1.01	1.63	-0.21	-	-1.07	-
Transcript_contig_91414 (91414)	-0.67	-	0.44	0.61	1.02	0.66	1.43	-	-	-1.2	-0.4
Transcript_contig_9879 (9879)	0.05	-	-0.75	-0.04	0.98	0.45	2.15	-	-	-1.01	-2.84

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.