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  5. Cz02g27180.t1

Cz02g27180.t1


Description : HEAT-like repeat; Importin-beta, N-terminal domain [Interproscan].


Gene families : OG_01_0002947 (OrthoFinder) Phylogenetic Tree(s): OG0002947_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz02g27180.t1
Cluster HCCA: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021348.90 tig00021348_g20597.t1 Protein translocation.nucleus.nucleocytoplasmic... 0.01 OrthoFinder
Cre01.g034000 30789060, IPB1 Protein translocation.nucleus.nucleocytoplasmic... 0.08 OrthoFinder
Dusal.0341s00012.1 33193250 Importin-beta, N-terminal domain; HEAT-like repeat... 0.02 OrthoFinder
EOD13968 No alias Importin-beta, N-terminal domain; HEAT-like repeat... 0.02 OrthoFinder
EOD32153 No alias Importin-beta, N-terminal domain; HEAT-like repeat... 0.02 OrthoFinder
OT_02G03840.1 No alias HEAT-like repeat [Interproscan]. 0.04 OrthoFinder
PTI_19G02980.1 No alias Importin-beta, N-terminal domain [Interproscan]. 0.04 OrthoFinder
Sro1968_g308410.1 Contig2992.g23785 Importin subunit beta-1 0.02 OrthoFinder
Transcript_contig_55044 55044 HEAT-like repeat; Importin-beta, N-terminal domain... 0.03 OrthoFinder
Vocar.0001s0767.1 32884512 Importin-beta, N-terminal domain; HEAT-like repeat... 0.02 OrthoFinder
XM_002503144.1 MICPUN_82956, 82956 HEAT-like repeat; Importin-beta, N-terminal domain... 0.04 OrthoFinder
lcl|BLLF01000083.1_cds_GFH07239.1_1716 HaLaN_02016, GFH07239 Importin N-terminal domain-containing protein 0.01 OrthoFinder
lcl|LHPG02000013.1_cds_PRW44609.1_2368 PRW44609 Importin subunit beta-1-like 0.04 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004827 proline-tRNA ligase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
CC GO:0005783 endoplasmic reticulum IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0006433 prolyl-tRNA aminoacylation IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0009966 regulation of signal transduction IEP Enrichment
BP GO:0010035 response to inorganic substance IEP Enrichment
BP GO:0010038 response to metal ion IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0010646 regulation of cell communication IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
MF GO:0016755 aminoacyltransferase activity IEP Enrichment
MF GO:0016756 glutathione gamma-glutamylcysteinyltransferase activity IEP Enrichment
MF GO:0017056 structural constituent of nuclear pore IEP Enrichment
MF GO:0017069 snRNA binding IEP Enrichment
MF GO:0017070 U6 snRNA binding IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
BP GO:0019748 secondary metabolic process IEP Enrichment
BP GO:0023051 regulation of signaling IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0030118 clathrin coat IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030125 clathrin vesicle coat IEP Enrichment
CC GO:0030126 COPI vesicle coat IEP Enrichment
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Enrichment
CC GO:0030132 clathrin coat of coated pit IEP Enrichment
MF GO:0030623 U5 snRNA binding IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
BP GO:0032012 regulation of ARF protein signal transduction IEP Enrichment
BP GO:0042221 response to chemical IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
BP GO:0044550 secondary metabolite biosynthetic process IEP Enrichment
BP GO:0046578 regulation of Ras protein signal transduction IEP Enrichment
BP GO:0046937 phytochelatin metabolic process IEP Enrichment
BP GO:0046938 phytochelatin biosynthetic process IEP Enrichment
BP GO:0048583 regulation of response to stimulus IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1902531 regulation of intracellular signal transduction IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001494 Importin-beta_N 84 162
No external refs found!