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  5. Cpa|evm.model.tig00000980.6

Cpa|evm.model.tig00000980.6 (tig00000980_g6131.t1)


Aliases : tig00000980_g6131.t1

Description : Protein modification.phosphorylation.atypical kinase families.RIO kinase


Gene families : OG_01_0003136 (OrthoFinder) Phylogenetic Tree(s): OG0003136_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000980.6
Cluster HCCA: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
Cz08g13210.t1 No alias RIO1 family [Interproscan]. 0.04 OrthoFinder
EOD28399 No alias RIO1 family [Interproscan]. 0.03 OrthoFinder
OT_14G00330.1 No alias RIO1 family [Interproscan]. 0.04 OrthoFinder
PTI_27G00620.1 No alias RIO1 family [Interproscan]. 0.07 OrthoFinder
Sro1412_g270480.1 Contig422.g5668 Protein kinase RIO1 0.05 OrthoFinder
TP02G00750.1 No alias RIO1 family [Interproscan]. 0.04 OrthoFinder
XM_003063692.1 MicpuC2_2206, 2206 RIO1 family [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000005.1_cds_PRW58527.1_7750 PRW58527 Serine threonine-kinase RIO1-like 0.07 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003697 single-stranded DNA binding IEP Enrichment
MF GO:0003724 RNA helicase activity IEP Enrichment
MF GO:0003872 6-phosphofructokinase activity IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005789 endoplasmic reticulum membrane IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
MF GO:0008443 phosphofructokinase activity IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0019200 carbohydrate kinase activity IEP Enrichment
CC GO:0031090 organelle membrane IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment

No InterPro domains available for this sequence

No external refs found!