1. Home
  2. Species
  3. Chromochloris zofingiensis
  4. Sequence
  5. Cz02g25040.t1

Cz02g25040.t1


Description : Trypsin-like peptidase domain; PDZ domain [Interproscan].


Gene families : OG_01_0000099 (OrthoFinder) Phylogenetic Tree(s): OG0000099_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz02g25040.t1
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
Cre01.g028350 30789587, DEG8 Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder
Sro1351_g265220.1 Contig2702.g21765 Do-like 8, chloroplastic 0.02 OrthoFinder
Sro556_g166020.1 Contig1584.g14393 Probable periplasmic serine endoprotease DegP-like 0.02 OrthoFinder
SymbC1.scaffold2.2162 2.2162 PDZ domain; PurM-like, C-terminal domain; Trypsin-like... 0.02 OrthoFinder
Vocar.0001s0901.1 32884820 Trypsin-like peptidase domain; PDZ domain [Interproscan]. 0.02 OrthoFinder
Vocar.0026s0089.1 32892433 Trypsin-like peptidase domain; PDZ domain [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000012.1_cds_PRW45178.1_1975 PRW45178 Protease Do-like chloroplastic 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEP Enrichment
MF GO:0004620 phospholipase activity IEP Enrichment
MF GO:0005534 galactose binding IEP Enrichment
BP GO:0006284 base-excision repair IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
MF GO:0008171 O-methyltransferase activity IEP Enrichment
MF GO:0016298 lipase activity IEP Enrichment
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
MF GO:0030151 molybdenum ion binding IEP Enrichment
MF GO:0048029 monosaccharide binding IEP Enrichment
InterPro domains Description Start Stop
IPR001478 PDZ 387 484
No external refs found!