Cz02g23050.t1

Description : Clathrin/coatomer adaptor, adaptin-like, N-terminal; Beta-adaptin appendage, C-terminal subdomain [Interproscan].

Gene families : OG_01_0000809 (OrthoFinder) Phylogenetic Tree(s): OG0000809_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cz02g23050.t1
Cluster	HCCA: Cluster_23

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00020592.38	tig00020592_g11671.t1	Vesicle trafficking.clathrin coated vesicle (CCV)...	0.03	OrthoFinder
Cre05.g234665	30783487, AP4B4	Vesicle trafficking.endomembrane trafficking.vacuolar...	0.05	OrthoFinder
Cre11.g478156	30775875	Vesicle trafficking.clathrin coated vesicle (CCV)...	0.05	OrthoFinder
Dusal.0391s00014.1	33187360	Clathrin/coatomer adaptor, adaptin-like, N-terminal...	0.05	OrthoFinder
EOD14985	No alias	Adaptor protein 2 beta subunit 1 [Ensembl].	0.05	OrthoFinder
PTI_13G02480.1	No alias	Beta-adaptin appendage, C-terminal subdomain;...	0.03	OrthoFinder
Sro413_g138080.1	Contig3915.g30008	AP-1 complex subunit beta-1	0.06	OrthoFinder
Sro951_g223960.1	Contig3277.g25794	AP-1 complex subunit beta-1	0.05	OrthoFinder
Transcript_contig_54664	54664	Beta-adaptin appendage, C-terminal subdomain;...	0.03	OrthoFinder
Vocar.0027s0022.1	32887254	Beta-adaptin appendage, C-terminal subdomain;...	0.04	OrthoFinder

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0016192	vesicle-mediated transport	IEA	Interproscan
CC	GO:0030117	membrane coat	IEA	Interproscan
CC	GO:0030119	AP-type membrane coat adaptor complex	None	Extended
CC	GO:0030131	clathrin adaptor complex	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006887	exocytosis	IEP	Enrichment
CC	GO:0030118	clathrin coat	IEP	Enrichment
CC	GO:0030120	vesicle coat	IEP	Enrichment
CC	GO:0030125	clathrin vesicle coat	IEP	Enrichment
CC	GO:0030130	clathrin coat of trans-Golgi network vesicle	IEP	Enrichment
CC	GO:0030132	clathrin coat of coated pit	IEP	Enrichment
BP	GO:0032940	secretion by cell	IEP	Enrichment
BP	GO:0046903	secretion	IEP	Enrichment
CC	GO:0098797	plasma membrane protein complex	IEP	Enrichment
BP	GO:0140352	export from cell	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR002553	Clathrin/coatomer_adapt-like_N	14	531
IPR015151	B-adaptin_app_sub_C	829	936

External Links

No external refs found!