Cz02g21050.t1


Description : gag-polypeptide of LTR copia-type [Interproscan].


Gene families : OG_01_0000023 (OrthoFinder) Phylogenetic Tree(s): OG0000023_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz02g21050.t1
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
Cz01g34120.t1 No alias Ribonuclease H domain [Interproscan]. 0.05 OrthoFinder
Cz01g34150.t1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.05 OrthoFinder
Cz01g34170.t1 No alias Reverse transcriptase, RNA-dependent DNA polymerase;... 0.06 OrthoFinder
Cz02g21060.t1 No alias Reverse transcriptase, RNA-dependent DNA polymerase;... 0.05 OrthoFinder
Cz02g21160.t1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.05 OrthoFinder
Cz02g21220.t1 No alias Integrase, catalytic core; Reverse transcriptase,... 0.05 OrthoFinder
Cz02g21260.t1 No alias Hypothetical protein 0.05 OrthoFinder
Cz02g21270.t1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.04 OrthoFinder
Cz03g25140.t1 No alias Ribonuclease H domain [Interproscan]. 0.06 OrthoFinder
Cz03g25200.t1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.03 OrthoFinder
Cz05g10130.t1 No alias Reverse transcriptase, RNA-dependent DNA polymerase;... 0.03 OrthoFinder
Cz12g13100.t1 No alias Reverse transcriptase, RNA-dependent DNA polymerase;... 0.05 OrthoFinder
Cz12g13180.t1 No alias Reverse transcriptase, RNA-dependent DNA polymerase;... 0.14 OrthoFinder
Cz12g13200.t1 No alias Hypothetical protein 0.07 OrthoFinder
Cz14g04110.t1 No alias GAG-pre-integrase domain; Integrase, catalytic core... 0.05 OrthoFinder
Cz16g05020.t1 No alias Hypothetical protein 0.06 OrthoFinder
Cz17g17240.t1 No alias Hypothetical protein 0.04 OrthoFinder
UNPLg00551.t1 No alias Hypothetical protein 0.07 OrthoFinder
UNPLg00679.t1 No alias Hypothetical protein 0.06 OrthoFinder
UNPLg00686.t1 No alias Hypothetical protein 0.08 OrthoFinder
UNPLg00762.t1 No alias Hypothetical protein 0.03 OrthoFinder
UNPLg00808.t1 No alias Hypothetical protein 0.05 OrthoFinder
UNPLg00814.t1 No alias Hypothetical protein 0.08 OrthoFinder
UNPLg00888.t1 No alias Hypothetical protein 0.05 OrthoFinder
lcl|BLLF01000379.1_cds_GFH11159.1_5636 HaLaN_06609, GFH11159 H0102C09.1 protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003777 microtubule motor activity IEP Enrichment
BP GO:0006813 potassium ion transport IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0015079 potassium ion transmembrane transporter activity IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
BP GO:0034220 ion transmembrane transport IEP Enrichment
MF GO:0046873 metal ion transmembrane transporter activity IEP Enrichment
BP GO:0071805 potassium ion transmembrane transport IEP Enrichment
BP GO:0098655 cation transmembrane transport IEP Enrichment
BP GO:0098660 inorganic ion transmembrane transport IEP Enrichment
BP GO:0098662 inorganic cation transmembrane transport IEP Enrichment

No InterPro domains available for this sequence

No external refs found!