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Description : gag-polypeptide of LTR copia-type [Interproscan].
Gene families : OG_01_0000023 (OrthoFinder) Phylogenetic Tree(s): OG0000023_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cz02g21050.t1 | |
| Cluster | HCCA: Cluster_67 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cz01g34120.t1 | No alias | Ribonuclease H domain [Interproscan]. | 0.05 | OrthoFinder | |
| Cz01g34150.t1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.05 | OrthoFinder | |
| Cz01g34170.t1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase;... | 0.06 | OrthoFinder | |
| Cz02g21060.t1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase;... | 0.05 | OrthoFinder | |
| Cz02g21160.t1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.05 | OrthoFinder | |
| Cz02g21220.t1 | No alias | Integrase, catalytic core; Reverse transcriptase,... | 0.05 | OrthoFinder | |
| Cz02g21260.t1 | No alias | Hypothetical protein | 0.05 | OrthoFinder | |
| Cz02g21270.t1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.04 | OrthoFinder | |
| Cz03g25140.t1 | No alias | Ribonuclease H domain [Interproscan]. | 0.06 | OrthoFinder | |
| Cz03g25200.t1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.03 | OrthoFinder | |
| Cz05g10130.t1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase;... | 0.03 | OrthoFinder | |
| Cz12g13100.t1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase;... | 0.05 | OrthoFinder | |
| Cz12g13180.t1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase;... | 0.14 | OrthoFinder | |
| Cz12g13200.t1 | No alias | Hypothetical protein | 0.07 | OrthoFinder | |
| Cz14g04110.t1 | No alias | GAG-pre-integrase domain; Integrase, catalytic core... | 0.05 | OrthoFinder | |
| Cz16g05020.t1 | No alias | Hypothetical protein | 0.06 | OrthoFinder | |
| Cz17g17240.t1 | No alias | Hypothetical protein | 0.04 | OrthoFinder | |
| UNPLg00551.t1 | No alias | Hypothetical protein | 0.07 | OrthoFinder | |
| UNPLg00679.t1 | No alias | Hypothetical protein | 0.06 | OrthoFinder | |
| UNPLg00686.t1 | No alias | Hypothetical protein | 0.08 | OrthoFinder | |
| UNPLg00762.t1 | No alias | Hypothetical protein | 0.03 | OrthoFinder | |
| UNPLg00808.t1 | No alias | Hypothetical protein | 0.05 | OrthoFinder | |
| UNPLg00814.t1 | No alias | Hypothetical protein | 0.08 | OrthoFinder | |
| UNPLg00888.t1 | No alias | Hypothetical protein | 0.05 | OrthoFinder | |
| lcl|BLLF01000379.1_cds_GFH11159.1_5636 | HaLaN_06609, GFH11159 | H0102C09.1 protein | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003777 | microtubule motor activity | IEP | Enrichment |
| BP | GO:0006813 | potassium ion transport | IEP | Enrichment |
| MF | GO:0008017 | microtubule binding | IEP | Enrichment |
| MF | GO:0015079 | potassium ion transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0015631 | tubulin binding | IEP | Enrichment |
| BP | GO:0034220 | ion transmembrane transport | IEP | Enrichment |
| MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0071805 | potassium ion transmembrane transport | IEP | Enrichment |
| BP | GO:0098655 | cation transmembrane transport | IEP | Enrichment |
| BP | GO:0098660 | inorganic ion transmembrane transport | IEP | Enrichment |
| BP | GO:0098662 | inorganic cation transmembrane transport | IEP | Enrichment |
No InterPro domains available for this sequence
| No external refs found! |