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  5. Cz02g20230.t1

Cz02g20230.t1


Description : Staphylococcal nuclease (SNase-like), OB-fold; Tudor domain [Interproscan].


Gene families : OG_01_0002285 (OrthoFinder) Phylogenetic Tree(s): OG0002285_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz02g20230.t1
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021357.71 tig00021357_g20794.t1 RNA processing.messenger ribonucleoprotein particle... 0.02 OrthoFinder
lcl|LHPG02000003.1_cds_PRW59499.1_6431 PRW59499 Tudor domain; Staphylococcal nuclease (SNase-like),... 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
MF GO:0004559 alpha-mannosidase activity IEP Enrichment
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Enrichment
MF GO:0005096 GTPase activator activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
MF GO:0008047 enzyme activator activity IEP Enrichment
MF GO:0015923 mannosidase activity IEP Enrichment
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
MF GO:0016972 thiol oxidase activity IEP Enrichment
MF GO:0030695 GTPase regulator activity IEP Enrichment
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Enrichment
InterPro domains Description Start Stop
IPR002999 Tudor 690 804
IPR016071 Staphylococal_nuclease_OB-fold 549 658
IPR016071 Staphylococal_nuclease_OB-fold 61 121
IPR016071 Staphylococal_nuclease_OB-fold 229 321
IPR016071 Staphylococal_nuclease_OB-fold 808 917
IPR016071 Staphylococal_nuclease_OB-fold 362 484
No external refs found!