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  5. Cz02g20030.t1

Cz02g20030.t1


Description : DnaJ domain [Interproscan].


Gene families : OG_01_0000003 (OrthoFinder) Phylogenetic Tree(s): OG0000003_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz02g20030.t1
Cluster HCCA: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000144.35 tig00000144_g9025.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00001278.13 tig00001278_g7992.t1 No description available 0.01 OrthoFinder
Cpa|evm.model.tig00021318.36 tig00021318_g20154.t1 No description available 0.02 OrthoFinder
EOD17748 No alias Tetratricopeptide repeat; DnaJ domain [Interproscan]. 0.01 OrthoFinder
OT_06G00640.1 No alias DnaJ domain [Interproscan]. 0.02 OrthoFinder
Transcript_contig_56380 56380 DnaJ domain [Interproscan]. 0.01 OrthoFinder
Vocar.0004s0066.1 32889629 DnaJ domain [Interproscan]. 0.03 OrthoFinder
XM_002506061.1 MICPUN_74160, 74160 DnaJ domain [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000004.1_cds_PRW58799.1_7129 PRW58799 Molecular chaperone 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Enrichment
CC GO:0000228 nuclear chromosome IEP Enrichment
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
CC GO:0000439 transcription factor TFIIH core complex IEP Enrichment
BP GO:0001510 RNA methylation IEP Enrichment
MF GO:0001671 ATPase activator activity IEP Enrichment
BP GO:0002949 tRNA threonylcarbamoyladenosine modification IEP Enrichment
MF GO:0003682 chromatin binding IEP Enrichment
MF GO:0004358 glutamate N-acetyltransferase activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005667 transcription regulator complex IEP Enrichment
CC GO:0005669 transcription factor TFIID complex IEP Enrichment
CC GO:0005681 spliceosomal complex IEP Enrichment
CC GO:0005788 endoplasmic reticulum lumen IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0006338 chromatin remodeling IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006525 arginine metabolic process IEP Enrichment
BP GO:0006526 arginine biosynthetic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006887 exocytosis IEP Enrichment
BP GO:0009064 glutamine family amino acid metabolic process IEP Enrichment
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Enrichment
BP GO:0009306 protein secretion IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
BP GO:0016556 mRNA modification IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0019899 enzyme binding IEP Enrichment
MF GO:0031625 ubiquitin protein ligase binding IEP Enrichment
CC GO:0031974 membrane-enclosed lumen IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
BP GO:0035592 establishment of protein localization to extracellular region IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
CC GO:0043233 organelle lumen IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
MF GO:0044389 ubiquitin-like protein ligase binding IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
MF GO:0060590 ATPase regulator activity IEP Enrichment
CC GO:0070013 intracellular organelle lumen IEP Enrichment
BP GO:0070525 tRNA threonylcarbamoyladenosine metabolic process IEP Enrichment
BP GO:0071692 protein localization to extracellular region IEP Enrichment
BP GO:0080009 mRNA methylation IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 49 109
No external refs found!