Description : Ribosomal protein S13 [Interproscan].
Gene families : OG_01_0000909 (OrthoFinder) Phylogenetic Tree(s): OG0000909_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Cz02g19040.t1 | |
Cluster | HCCA: Cluster_102 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cre12.g493950 | 30792612, PRPS13 | Protein biosynthesis.organelle translation... | 0.23 | OrthoFinder | |
Dusal.1916s00001.1 | 33187808 | Ribosomal protein S13 [Interproscan]. | 0.02 | OrthoFinder | |
OT_03G05840.1 | No alias | Ribosomal protein S13 [Interproscan]. | 0.13 | OrthoFinder | |
Sro51_chlor_g029670.1 | Rps13 | Rps13 | 0.04 | OrthoFinder | |
Sro51_chlor_g029680.1 | Rps11 | Rps11 | 0.04 | OrthoFinder | |
Sro884_mit_g215880.1 | Rps13 | Rps13 | 0.04 | OrthoFinder | |
TPCG02670.1 | No alias | Ribosomal protein S11 [Interproscan]. | 0.05 | OrthoFinder | |
Transcript_contig_57743 | 57743 | Ribosomal protein S13 [Interproscan]. | 0.04 | OrthoFinder | |
Vocar.0031s0017.1 | 32890165 | Ribosomal protein S13 [Interproscan]. | 0.05 | OrthoFinder | |
XM_002506993.1 | MICPUN_89270, 89270 | Ribosomal protein S13, chloroplast precursor (RPS13) | 0.08 | OrthoFinder | |
XM_003054733.1 | MicpuC2_45129, 45129 | Ribosomal protein S13, chloroplast precursor (RPS13) | 0.03 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEA | Interproscan |
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006457 | protein folding | IEP | Enrichment |
CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | Enrichment |
MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | Enrichment |
MF | GO:0019843 | rRNA binding | IEP | Enrichment |
CC | GO:0019898 | extrinsic component of membrane | IEP | Enrichment |
MF | GO:0051920 | peroxiredoxin activity | IEP | Enrichment |
CC | GO:1990204 | oxidoreductase complex | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001892 | Ribosomal_S13 | 41 | 145 |
No external refs found! |