Cpa|evm.model.tig00000980.10 (tig00000980_g6134.t1)

Aliases : tig00000980_g6134.t1

Description : Protein translocation.endoplasmic reticulum.co-translational insertion system.Sec61 subcomplex.gamma subunit

Gene families : OG_01_0003548 (OrthoFinder) Phylogenetic Tree(s): OG0003548_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00000980.10
Cluster	HCCA: Cluster_81

Target	Alias	Description	ECC score	Gene Family Method	Actions
Vocar.0011s0275.1	32895113	Protein translocase complex, SecE/Sec61-gamma subunit...	0.04	OrthoFinder
XM_003061016.1	MicpuC2_20105, 20105	Type II secretory pathway family protein	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
BP	GO:0006605	protein targeting	IEA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000290	deadenylation-dependent decapping of nuclear-transcribed mRNA	IEP	Enrichment
BP	GO:0000956	nuclear-transcribed mRNA catabolic process	IEP	Enrichment
MF	GO:0003723	RNA binding	IEP	Enrichment
MF	GO:0003729	mRNA binding	IEP	Enrichment
MF	GO:0004177	aminopeptidase activity	IEP	Enrichment
CC	GO:0005787	signal peptidase complex	IEP	Enrichment
CC	GO:0005849	mRNA cleavage factor complex	IEP	Enrichment
BP	GO:0006401	RNA catabolic process	IEP	Enrichment
BP	GO:0006402	mRNA catabolic process	IEP	Enrichment
BP	GO:0006465	signal peptide processing	IEP	Enrichment
BP	GO:0006486	protein glycosylation	IEP	Enrichment
BP	GO:0006487	protein N-linked glycosylation	IEP	Enrichment
BP	GO:0006518	peptide metabolic process	IEP	Enrichment
BP	GO:0006612	protein targeting to membrane	IEP	Enrichment
BP	GO:0006613	cotranslational protein targeting to membrane	IEP	Enrichment
BP	GO:0006614	SRP-dependent cotranslational protein targeting to membrane	IEP	Enrichment
BP	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IEP	Enrichment
MF	GO:0008047	enzyme activator activity	IEP	Enrichment
MF	GO:0008238	exopeptidase activity	IEP	Enrichment
BP	GO:0009892	negative regulation of metabolic process	IEP	Enrichment
BP	GO:0010605	negative regulation of macromolecule metabolic process	IEP	Enrichment
BP	GO:0010629	negative regulation of gene expression	IEP	Enrichment
BP	GO:0016071	mRNA metabolic process	IEP	Enrichment
BP	GO:0016485	protein processing	IEP	Enrichment
BP	GO:0019439	aromatic compound catabolic process	IEP	Enrichment
BP	GO:0033365	protein localization to organelle	IEP	Enrichment
BP	GO:0034613	cellular protein localization	IEP	Enrichment
BP	GO:0034655	nucleobase-containing compound catabolic process	IEP	Enrichment
BP	GO:0043413	macromolecule glycosylation	IEP	Enrichment
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Enrichment
BP	GO:0044267	cellular protein metabolic process	IEP	Enrichment
BP	GO:0044270	cellular nitrogen compound catabolic process	IEP	Enrichment
BP	GO:0045047	protein targeting to ER	IEP	Enrichment
BP	GO:0046700	heterocycle catabolic process	IEP	Enrichment
BP	GO:0048193	Golgi vesicle transport	IEP	Enrichment
BP	GO:0048519	negative regulation of biological process	IEP	Enrichment
BP	GO:0051604	protein maturation	IEP	Enrichment
BP	GO:0051668	localization within membrane	IEP	Enrichment
BP	GO:0070085	glycosylation	IEP	Enrichment
BP	GO:0070727	cellular macromolecule localization	IEP	Enrichment
BP	GO:0070972	protein localization to endoplasmic reticulum	IEP	Enrichment
BP	GO:0072594	establishment of protein localization to organelle	IEP	Enrichment
BP	GO:0072599	establishment of protein localization to endoplasmic reticulum	IEP	Enrichment
BP	GO:0072657	protein localization to membrane	IEP	Enrichment
BP	GO:0090150	establishment of protein localization to membrane	IEP	Enrichment
BP	GO:0110154	RNA decapping	IEP	Enrichment
BP	GO:0110156	methylguanosine-cap decapping	IEP	Enrichment
CC	GO:0140534	endoplasmic reticulum protein-containing complex	IEP	Enrichment
BP	GO:1901361	organic cyclic compound catabolic process	IEP	Enrichment
CC	GO:1905368	peptidase complex	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001901	Translocase_SecE/Sec61-g	13	65

External Links

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Cpa|evm.model.tig00000980.10 (tig00000980_g6134.t1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation