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  5. Cpa|evm.model.tig00000970.8

Cpa|evm.model.tig00000970.8 (tig00000970_g5830.t1)


Aliases : tig00000970_g5830.t1

No description available


Gene families : OG_01_0002948 (OrthoFinder) Phylogenetic Tree(s): OG0002948_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000970.8
Cluster HCCA: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
Cz09g16190.t1 No alias Pyrrolo-quinoline quinone repeat; ER membrane protein... 0.02 OrthoFinder
PTI_03G01750.1 No alias Pyrrolo-quinoline quinone repeat; ER membrane protein... 0.01 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8496064.1_2062 KAA8496064 ER membrane protein complex subunit 1 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000959 mitochondrial RNA metabolic process IEP Enrichment
BP GO:0002097 tRNA wobble base modification IEP Enrichment
BP GO:0002098 tRNA wobble uridine modification IEP Enrichment
MF GO:0005375 copper ion transmembrane transporter activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
CC GO:0005739 mitochondrion IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
InterPro domains Description Start Stop
IPR011678 EMC1_C 715 829
IPR002372 PQQ_repeat 62 243
No external refs found!