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  5. Cz02g13230.t1

Cz02g13230.t1


Description : Short-chain dehydrogenase/reductase SDR [Interproscan].


Gene families : OG_01_0001124 (OrthoFinder) Phylogenetic Tree(s): OG0001124_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz02g13230.t1
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
Cre08.g380550 30774027 Short-chain dehydrogenase TIC 32, chloroplastic... 0.02 OrthoFinder
lcl|BLLF01000006.1_cds_GFH05719.1_196 HaLaN_00223, GFH05719 Short-chain dehydrogenase/reductase SDR [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000025.1_cds_GFH06172.1_649 HaLaN_00757, GFH06172 Hypothetical protein 0.02 OrthoFinder
lcl|BLLF01000025.1_cds_GFH06173.1_650 HaLaN_00758, GFH06173 Hypothetical protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004521 endoribonuclease activity IEP Enrichment
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Enrichment
BP GO:0006817 phosphate ion transport IEP Enrichment
MF GO:0008081 phosphoric diester hydrolase activity IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Enrichment
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Enrichment
MF GO:0033897 ribonuclease T2 activity IEP Enrichment
InterPro domains Description Start Stop
IPR002347 SDR_fam 17 222
No external refs found!