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  5. Cz02g12250.t1

Cz02g12250.t1


Description : SET domain; PHD-like zinc-binding domain; SAND domain [Interproscan].


Gene families : OG_01_0000051 (OrthoFinder) Phylogenetic Tree(s): OG0000051_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz02g12250.t1
Cluster HCCA: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021569.19 tig00021569_g22350.t1 Enzyme classification.EC_2 transferases.EC_2.1... 0.02 OrthoFinder
Cre12.g515050 30791872 Histone-lysine N-methyltransferase ATX3 OS=Arabidopsis thaliana 0.02 OrthoFinder
Dusal.0091s00008.1 33193960 SET domain [Interproscan]. 0.02 OrthoFinder
Dusal.0404s00008.1 33186413 SET domain [Interproscan]. 0.02 OrthoFinder
EOD25975 No alias Pre-SET domain; SET domain [Interproscan]. 0.02 OrthoFinder
OT_14G01610.1 No alias SET domain [Interproscan]. 0.02 OrthoFinder
PTI_01G03700.1 No alias SET domain; Zinc finger, PHD-finger; Bromodomain [Interproscan]. 0.02 OrthoFinder
PTI_22G01660.1 No alias Hypothetical protein 0.02 OrthoFinder
PTI_22G01670.1 No alias SET domain [Interproscan]. 0.02 OrthoFinder
PTI_22G01680.1 No alias SET domain [Interproscan]. 0.02 OrthoFinder
Sro72_g039840.1 Contig1459.g13383 36 and H4 lysine-20 specific 0.02 OrthoFinder
TP05G03050.1 No alias Pre-SET CXC domain; SET domain [Interproscan]. 0.02 OrthoFinder
Vocar.0003s0350.1 32889020 SET domain [Interproscan]. 0.02 OrthoFinder
Vocar.0006s0306.1 32894358 PHD-finger; SAND domain; PHD-zinc-finger like domain... 0.02 OrthoFinder
XM_002501306.1 MICPUN_57801, 57801 Set domain protein 0.02 OrthoFinder
XM_003059701.1 MicpuC2_59369, 59369 Set domain protein 0.01 OrthoFinder
XM_003062458.1 MicpuC2_68459, 68459 Set domain protein 0.02 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60593.1_4707 PRW60593 Histone-lysine N-methyltransferase ASHH2 0.03 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57331.1_9054 PRW57331 Microtubule-associated futsch isoform X1 0.02 OrthoFinder
lcl|LHPG02000014.1_cds_PRW39193.1_2673 PRW39193 Histone-lysine N-methyltransferase ATX2-like 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8500022.1_8975 KAA8500022 Histone-lysine N-methyltransferase ASHH2 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0005096 GTPase activator activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
MF GO:0005543 phospholipid binding IEP Enrichment
CC GO:0005681 spliceosomal complex IEP Enrichment
MF GO:0008047 enzyme activator activity IEP Enrichment
MF GO:0008134 transcription factor binding IEP Enrichment
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Enrichment
MF GO:0008289 lipid binding IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
MF GO:0017025 TBP-class protein binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0030695 GTPase regulator activity IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035091 phosphatidylinositol binding IEP Enrichment
MF GO:0140296 general transcription initiation factor binding IEP Enrichment
InterPro domains Description Start Stop
IPR000770 SAND_dom 1026 1077
IPR001214 SET_dom 1411 1515
No external refs found!